RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 COQ2Q96H96 371 aa12.47□□□□□ -0.41
SNRPA1-213ENST00000560856 DUX5Q96PT3 197 aa12.47□□□□□ -0.41
SNRPA1-213ENST00000560856 NR1H4Q96RI1 486 aaPredicted RBP12.47□□□□□ -0.41
SNRPA1-213ENST00000560856 MGLLQ99685 303 aa12.47□□□□□ -0.41
SNRPA1-213ENST00000560856 FAM192AQ9GZU8 254 aa12.47□□□□□ -0.41
SNRPA1-213ENST00000560856 ACOT13Q9NPJ3 140 aa12.47□□□□□ -0.41
SNRPA1-213ENST00000560856 ING4Q9UNL4 249 aa12.47□□□□□ -0.41
SNRPA1-213ENST00000560856 A0A1W2PP11 408 aa12.46□□□□□ -0.41
SNRPA1-213ENST00000560856 A0A1W2PRD5 423 aa12.46□□□□□ -0.41
SNRPA1-213ENST00000560856 A0A1W2PRF3 423 aa12.46□□□□□ -0.41
SNRPA1-213ENST00000560856 A0A1W2PRM7 423 aa12.46□□□□□ -0.41
SNRPA1-213ENST00000560856 TRIM77I1YAP6 450 aa12.46□□□□□ -0.41
SNRPA1-213ENST00000560856 DEGS1O15121 323 aa12.46□□□□□ -0.41
SNRPA1-213ENST00000560856 NPFFO15130 113 aa12.46□□□□□ -0.41
SNRPA1-213ENST00000560856 HTR3BO95264 441 aa12.46□□□□□ -0.41
SNRPA1-213ENST00000560856 CSN2P05814 226 aa12.46□□□□□ -0.41
SNRPA1-213ENST00000560856 UCHL1P09936 223 aa12.46□□□□□ -0.41
SNRPA1-213ENST00000560856 HSMCR30P0CW71 290 aa12.46□□□□□ -0.41
SNRPA1-213ENST00000560856 ZNF44P15621 663 aa12.46□□□□□ -0.41
SNRPA1-213ENST00000560856 EEF1B2P24534 225 aaKnown RBP12.46□□□□□ -0.41
SNRPA1-213ENST00000560856 MAPK3P27361 379 aaPredicted RBP12.46□□□□□ -0.41
SNRPA1-213ENST00000560856 P2RX3P56373 397 aa12.46□□□□□ -0.41
SNRPA1-213ENST00000560856 RPS25P62851 125 aaKnown RBP12.46□□□□□ -0.41
SNRPA1-213ENST00000560856 EMX1Q04741 257 aaPredicted RBP12.46□□□□□ -0.41
SNRPA1-213ENST00000560856 SCN1BQ07699 218 aa12.46□□□□□ -0.41
SNRPA1-213ENST00000560856 OR4D6Q8NGJ1 314 aa12.46□□□□□ -0.41
SNRPA1-213ENST00000560856 PPP1R35Q8TAP8 253 aa12.46□□□□□ -0.41
SNRPA1-213ENST00000560856 TMEM203Q969S6 136 aa12.46□□□□□ -0.41
SNRPA1-213ENST00000560856 MUL1Q969V5 352 aa12.46□□□□□ -0.41
SNRPA1-213ENST00000560856 YTHDF1Q9BYJ9 559 aaKnown RBP12.46□□□□□ -0.41
SNRPA1-213ENST00000560856 METTL9Q9H1A3 318 aa12.46□□□□□ -0.41
SNRPA1-213ENST00000560856 PPA2Q9H2U2 334 aa12.46□□□□□ -0.41
SNRPA1-213ENST00000560856 Q9H521 79 aa12.46□□□□□ -0.41
SNRPA1-213ENST00000560856 LINC00312Q9Y6C7 94 aa12.46□□□□□ -0.41
SNRPA1-213ENST00000560856 A0A1W2PPH5 198 aa12.45□□□□□ -0.42
SNRPA1-213ENST00000560856 hADV38S2A0JD32 116 aa12.45□□□□□ -0.42
SNRPA1-213ENST00000560856 MEGF11A6BM72 1044 aa12.45□□□□□ -0.42
SNRPA1-213ENST00000560856 MRPS14O60783 128 aaKnown RBP12.45□□□□□ -0.42
SNRPA1-213ENST00000560856 RBP4P02753 201 aa12.45□□□□□ -0.42
SNRPA1-213ENST00000560856 RNASE1P07998 156 aaKnown RBP12.45□□□□□ -0.42
SNRPA1-213ENST00000560856 MELTFP08582 738 aa12.45□□□□□ -0.42
SNRPA1-213ENST00000560856 GLIPR1P48060 266 aa12.45□□□□□ -0.42
SNRPA1-213ENST00000560856 RBM11P57052 281 aaKnown RBP12.45□□□□□ -0.42
SNRPA1-213ENST00000560856 AESQ08117 197 aa12.45□□□□□ -0.42
SNRPA1-213ENST00000560856 SSX1Q16384 188 aa12.45□□□□□ -0.42
SNRPA1-213ENST00000560856 CEACAM19Q7Z692 300 aa12.45□□□□□ -0.42
SNRPA1-213ENST00000560856 JAGN1Q8N5M9 183 aa12.45□□□□□ -0.42
SNRPA1-213ENST00000560856 PHYHIPQ92561 330 aa12.45□□□□□ -0.42
SNRPA1-213ENST00000560856 CORO2AQ92828 525 aa12.45□□□□□ -0.42
SNRPA1-213ENST00000560856 IFT22Q9H7X7 185 aa12.45□□□□□ -0.42
SNRPA1-213ENST00000560856 HEXA-AS1Q9H8Q6 139 aa12.45□□□□□ -0.42
SNRPA1-213ENST00000560856 ST3GAL6Q9Y274 331 aa12.45□□□□□ -0.42
SNRPA1-213ENST00000560856 MRPS28Q9Y2Q9 187 aaKnown RBP12.45□□□□□ -0.42
SNRPA1-213ENST00000560856 HOXA3O43365 443 aaPredicted RBP12.44□□□□□ -0.42
SNRPA1-213ENST00000560856 CGB3P0DN86 165 aa12.44□□□□□ -0.42
SNRPA1-213ENST00000560856 CGB7P0DN87 165 aa12.44□□□□□ -0.42
SNRPA1-213ENST00000560856 SRMP19623 302 aa12.44□□□□□ -0.42
SNRPA1-213ENST00000560856 SERPINA2P20848 420 aa12.44□□□□□ -0.42
SNRPA1-213ENST00000560856 SAA4P35542 130 aa12.44□□□□□ -0.42
SNRPA1-213ENST00000560856 SLC22A6Q4U2R8 563 aa12.44□□□□□ -0.42
SNRPA1-213ENST00000560856 GLIPR1L1Q6UWM5 242 aa12.44□□□□□ -0.42
SNRPA1-213ENST00000560856 ZNF367Q7RTV3 350 aa12.44□□□□□ -0.42
SNRPA1-213ENST00000560856 LDLRAD3Q86YD5 345 aa12.44□□□□□ -0.42
SNRPA1-213ENST00000560856 SPARTQ8N0X7 666 aa12.44□□□□□ -0.42
SNRPA1-213ENST00000560856 OSR2Q8N2R0 312 aa12.44□□□□□ -0.42
SNRPA1-213ENST00000560856 NKAIN3Q8N8D7 197 aa12.44□□□□□ -0.42
SNRPA1-213ENST00000560856 C17orf50Q8WW18 174 aa12.44□□□□□ -0.42
SNRPA1-213ENST00000560856 ZDHHC16Q969W1 377 aa12.44□□□□□ -0.42
SNRPA1-213ENST00000560856 ZNF714Q96N38 554 aa12.44□□□□□ -0.42
SNRPA1-213ENST00000560856 UQCC2Q9BRT2 126 aa12.44□□□□□ -0.42
SNRPA1-213ENST00000560856 ZMAT3Q9HA38 289 aaKnown RBP12.44□□□□□ -0.42
SNRPA1-213ENST00000560856 TENM1Q9UKZ4 2725 aa12.43□□□□□ -0.42
SNRPA1-213ENST00000560856 ODAMA1E959 279 aa12.43□□□□□ -0.42
SNRPA1-213ENST00000560856 TMEM89A2RUT3 159 aa12.43□□□□□ -0.42
SNRPA1-213ENST00000560856 GEMIN2O14893 280 aaKnown RBP12.43□□□□□ -0.42
SNRPA1-213ENST00000560856 ZNF780AO75290 641 aaPredicted RBP12.43□□□□□ -0.42
SNRPA1-213ENST00000560856 MMP23AO75900 390 aa12.43□□□□□ -0.42
SNRPA1-213ENST00000560856 IGHV1-8P0DP01 117 aa12.43□□□□□ -0.42
SNRPA1-213ENST00000560856 FABP5Q01469 135 aa12.43□□□□□ -0.42
SNRPA1-213ENST00000560856 PAX5Q02548 391 aa12.43□□□□□ -0.42
SNRPA1-213ENST00000560856 TRAM1Q15629 374 aa12.43□□□□□ -0.42
SNRPA1-213ENST00000560856 HSD17B12Q53GQ0 312 aa12.43□□□□□ -0.42
SNRPA1-213ENST00000560856 C1orf100Q5SVJ3 147 aa12.43□□□□□ -0.42
SNRPA1-213ENST00000560856 ZNF782Q6ZMW2 699 aaPredicted RBP12.43□□□□□ -0.42
SNRPA1-213ENST00000560856 TMEM86BQ8N661 226 aa12.43□□□□□ -0.42
SNRPA1-213ENST00000560856 PLPPR1Q8TBJ4 325 aa12.43□□□□□ -0.42
SNRPA1-213ENST00000560856 GFI1Q99684 422 aa12.43□□□□□ -0.42
SNRPA1-213ENST00000560856 NCOR1P1Q9H4R4 102 aa12.43□□□□□ -0.42
SNRPA1-213ENST00000560856 TCF7L1Q9HCS4 588 aa12.43□□□□□ -0.42
SNRPA1-213ENST00000560856 UBE2J1Q9Y385 318 aaPredicted RBP12.43□□□□□ -0.42
SNRPA1-213ENST00000560856 LRRC42Q9Y546 428 aa12.43□□□□□ -0.42
SNRPA1-213ENST00000560856 ANK2Q01484 3957 aa12.43□□□□□ -0.42
SNRPA1-213ENST00000560856 hCG_1809904A0A1W2PP81 198 aa12.42□□□□□ -0.42
SNRPA1-213ENST00000560856 A0A1W2PPE2 198 aa12.42□□□□□ -0.42
SNRPA1-213ENST00000560856 A0A1W2PR64 198 aa12.42□□□□□ -0.42
SNRPA1-213ENST00000560856 A0A1W2PRV1 198 aa12.42□□□□□ -0.42
SNRPA1-213ENST00000560856 MEIOCA2RUB1 952 aa12.42□□□□□ -0.42
SNRPA1-213ENST00000560856 FUOMA2VDF0 154 aa12.42□□□□□ -0.42
SNRPA1-213ENST00000560856 CSTBP04080 98 aaKnown RBP12.42□□□□□ -0.42
SNRPA1-213ENST00000560856 GTF2F2P13984 249 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms