RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 ZNF691Q5VV52 312 aa11.38□□□□□ -0.59
TPM1-223ENST00000560445 ZNF565Q8N9K5 539 aa11.38□□□□□ -0.59
TPM1-223ENST00000560445 SETD9Q8NE22 299 aa11.38□□□□□ -0.59
TPM1-223ENST00000560445 PXT1Q8NFP0 134 aa11.38□□□□□ -0.59
TPM1-223ENST00000560445 CFHR4Q92496 578 aa11.38□□□□□ -0.59
TPM1-223ENST00000560445 RNF166Q96A37 237 aaPredicted RBP11.38□□□□□ -0.59
TPM1-223ENST00000560445 RFT1Q96AA3 541 aa11.38□□□□□ -0.59
TPM1-223ENST00000560445 S100A13Q99584 98 aa11.38□□□□□ -0.59
TPM1-223ENST00000560445 NCOR1P1Q9H4R4 102 aa11.38□□□□□ -0.59
TPM1-223ENST00000560445 AMBNQ9NP70 447 aa11.38□□□□□ -0.59
TPM1-223ENST00000560445 MYRFQ9Y2G1 1151 aa11.38□□□□□ -0.59
TPM1-223ENST00000560445 NOTCH1P46531 2555 aa11.38□□□□□ -0.59
TPM1-223ENST00000560445 A6NDX4 124 aa11.37□□□□□ -0.59
TPM1-223ENST00000560445 ZNF729A6NN14 1252 aaPredicted RBP11.37□□□□□ -0.59
TPM1-223ENST00000560445 M0QZK8 103 aa11.37□□□□□ -0.59
TPM1-223ENST00000560445 FBXO24O75426 580 aa11.37□□□□□ -0.59
TPM1-223ENST00000560445 VSIG10L2P0DP72 767 aa11.37□□□□□ -0.59
TPM1-223ENST00000560445 CDK2P24941 298 aa11.37□□□□□ -0.59
TPM1-223ENST00000560445 SCN1BQ07699 218 aa11.37□□□□□ -0.59
TPM1-223ENST00000560445 IL13RA2Q14627 380 aa11.37□□□□□ -0.59
TPM1-223ENST00000560445 PLA1AQ53H76 456 aa11.37□□□□□ -0.59
TPM1-223ENST00000560445 ELP2Q6IA86 826 aa11.37□□□□□ -0.59
TPM1-223ENST00000560445 RPL22L1Q6P5R6 122 aaKnown RBP11.37□□□□□ -0.59
TPM1-223ENST00000560445 TCF23Q7RTU1 214 aa11.37□□□□□ -0.59
TPM1-223ENST00000560445 ABHD12Q8N2K0 398 aa11.37□□□□□ -0.59
TPM1-223ENST00000560445 OR4F17Q8NGA8 305 aa11.37□□□□□ -0.59
TPM1-223ENST00000560445 OR52N4Q8NGI2 321 aa11.37□□□□□ -0.59
TPM1-223ENST00000560445 OR51A4Q8NGJ6 313 aa11.37□□□□□ -0.59
TPM1-223ENST00000560445 OR5D18Q8NGL1 313 aa11.37□□□□□ -0.59
TPM1-223ENST00000560445 FAM110DQ8TAY7 271 aaPredicted RBP11.37□□□□□ -0.59
TPM1-223ENST00000560445 OR4F4Q96R69 305 aa11.37□□□□□ -0.59
TPM1-223ENST00000560445 BARHL1Q9BZE3 327 aa11.37□□□□□ -0.59
TPM1-223ENST00000560445 LIN7BQ9HAP6 207 aa11.37□□□□□ -0.59
TPM1-223ENST00000560445 IL36RNQ9UBH0 155 aa11.37□□□□□ -0.59
TPM1-223ENST00000560445 CKLFQ9UBR5 152 aa11.37□□□□□ -0.59
TPM1-223ENST00000560445 AASSQ9UDR5 926 aa11.37□□□□□ -0.59
TPM1-223ENST00000560445 HILPDAQ9Y5L2 63 aa11.37□□□□□ -0.59
TPM1-223ENST00000560445 XPNPEP2O43895 674 aa11.36□□□□□ -0.59
TPM1-223ENST00000560445 CHST1O43916 411 aa11.36□□□□□ -0.59
TPM1-223ENST00000560445 TSPAN15O95858 294 aa11.36□□□□□ -0.59
TPM1-223ENST00000560445 OPN1MWP04001 364 aa11.36□□□□□ -0.59
TPM1-223ENST00000560445 OPN1MW2P0DN77 364 aa11.36□□□□□ -0.59
TPM1-223ENST00000560445 OPN1MW3P0DN78 364 aa11.36□□□□□ -0.59
TPM1-223ENST00000560445 CD34P28906 385 aa11.36□□□□□ -0.59
TPM1-223ENST00000560445 C21orf33P30042 268 aaPredicted RBP11.36□□□□□ -0.59
TPM1-223ENST00000560445 RSU1Q15404 277 aa11.36□□□□□ -0.59
TPM1-223ENST00000560445 TTC23Q5W5X9 447 aa11.36□□□□□ -0.59
TPM1-223ENST00000560445 LINC00596Q86U02 117 aa11.36□□□□□ -0.59
TPM1-223ENST00000560445 PACRGLQ8N7B6 248 aa11.36□□□□□ -0.59
TPM1-223ENST00000560445 TPRX1Q8N7U7 411 aa11.36□□□□□ -0.59
TPM1-223ENST00000560445 OR52I1Q8NGK6 324 aa11.36□□□□□ -0.59
TPM1-223ENST00000560445 OR10AC1Q8NH08 325 aa11.36□□□□□ -0.59
TPM1-223ENST00000560445 PIFOQ8TCI5 191 aa11.36□□□□□ -0.59
TPM1-223ENST00000560445 THRSPQ92748 146 aa11.36□□□□□ -0.59
TPM1-223ENST00000560445 RAB9BQ9NP90 201 aa11.36□□□□□ -0.59
TPM1-223ENST00000560445 FGF20Q9NP95 211 aaPredicted RBP11.36□□□□□ -0.59
TPM1-223ENST00000560445 EXOSC1Q9Y3B2 195 aaKnown RBP11.36□□□□□ -0.59
TPM1-223ENST00000560445 A0A0G2JK05 382 aa11.35□□□□□ -0.59
TPM1-223ENST00000560445 SLC33A1O00400 549 aaPredicted RBP11.35□□□□□ -0.59
TPM1-223ENST00000560445 KCNAB3O43448 404 aa11.35□□□□□ -0.59
TPM1-223ENST00000560445 ZNF780AO75290 641 aaPredicted RBP11.35□□□□□ -0.59
TPM1-223ENST00000560445 VDAC2P45880 294 aaPredicted RBP11.35□□□□□ -0.59
TPM1-223ENST00000560445 AESQ08117 197 aa11.35□□□□□ -0.59
TPM1-223ENST00000560445 PAN3Q58A45 887 aaKnown RBP11.35□□□□□ -0.59
TPM1-223ENST00000560445 NDUFA11Q86Y39 141 aa11.35□□□□□ -0.59
TPM1-223ENST00000560445 TNFAIP8L1Q8WVP5 186 aa11.35□□□□□ -0.59
TPM1-223ENST00000560445 SPACA5Q96QH8 159 aa11.35□□□□□ -0.59
TPM1-223ENST00000560445 PDCD1LG2Q9BQ51 273 aa11.35□□□□□ -0.59
TPM1-223ENST00000560445 FAM192AQ9GZU8 254 aa11.35□□□□□ -0.59
TPM1-223ENST00000560445 ZNF702PQ9H963 129 aa11.35□□□□□ -0.59
TPM1-223ENST00000560445 ISG20L2Q9H9L3 353 aaKnown RBP11.35□□□□□ -0.59
TPM1-223ENST00000560445 TMEM138Q9NPI0 162 aa11.35□□□□□ -0.59
TPM1-223ENST00000560445 SIGLEC9Q9Y336 463 aa11.35□□□□□ -0.59
TPM1-223ENST00000560445 VWFP04275 2813 aa11.34□□□□□ -0.59
TPM1-223ENST00000560445 A0A087X0M5 115 aa11.34□□□□□ -0.59
TPM1-223ENST00000560445 IGKV1-12A0A0C4DH73 117 aa11.34□□□□□ -0.59
TPM1-223ENST00000560445 KBTBD11-OT1A0A1B0GTJ5 212 aa11.34□□□□□ -0.59
TPM1-223ENST00000560445 A0A1B0GX30 115 aa11.34□□□□□ -0.59
TPM1-223ENST00000560445 MEX3AA1L020 520 aaKnown RBP11.34□□□□□ -0.59
TPM1-223ENST00000560445 FAM90A22PA8MWA6 464 aa11.34□□□□□ -0.59
TPM1-223ENST00000560445 H0YJX3 145 aa11.34□□□□□ -0.59
TPM1-223ENST00000560445 IGKV1D-12P01611 117 aa11.34□□□□□ -0.59
TPM1-223ENST00000560445 CSTBP04080 98 aaKnown RBP11.34□□□□□ -0.59
TPM1-223ENST00000560445 TAS2R43P59537 309 aa11.34□□□□□ -0.59
TPM1-223ENST00000560445 ZP1P60852 638 aa11.34□□□□□ -0.59
TPM1-223ENST00000560445 PAX5Q02548 391 aa11.34□□□□□ -0.59
TPM1-223ENST00000560445 GPR176Q14439 515 aa11.34□□□□□ -0.59
TPM1-223ENST00000560445 CDK5R1Q15078 307 aa11.34□□□□□ -0.59
TPM1-223ENST00000560445 LRRC36Q1X8D7 754 aa11.34□□□□□ -0.59
TPM1-223ENST00000560445 PRAMEF5Q5TYX0 476 aa11.34□□□□□ -0.59
TPM1-223ENST00000560445 SLC16A12Q6ZSM3 486 aa11.34□□□□□ -0.59
TPM1-223ENST00000560445 SATL1Q86VE3 508 aa11.34□□□□□ -0.59
TPM1-223ENST00000560445 TMEM219Q86XT9 240 aa11.34□□□□□ -0.59
TPM1-223ENST00000560445 OR10A7Q8NGE5 316 aa11.34□□□□□ -0.59
TPM1-223ENST00000560445 OR4P4Q8NGL7 312 aa11.34□□□□□ -0.59
TPM1-223ENST00000560445 OR9G1Q8NH87 305 aa11.34□□□□□ -0.59
TPM1-223ENST00000560445 CYGBQ8WWM9 190 aa11.34□□□□□ -0.59
TPM1-223ENST00000560445 TMEM106AQ96A25 262 aa11.34□□□□□ -0.59
TPM1-223ENST00000560445 METTL9Q9H1A3 318 aa11.34□□□□□ -0.59
TPM1-223ENST00000560445 VCXQ9H320 206 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms