RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 HTN1P15515 57 aa11.88□□□□□ -0.51
TRAF3-208ENST00000560371 H3F3AP84243 136 aa11.88□□□□□ -0.51
TRAF3-208ENST00000560371 SLC25A45Q8N413 288 aa11.88□□□□□ -0.51
TRAF3-208ENST00000560371 TTTY12Q9BZ98 90 aa11.88□□□□□ -0.51
TRAF3-208ENST00000560371 UQCC1Q9NVA1 299 aa11.88□□□□□ -0.51
TRAF3-208ENST00000560371 OOEPA6NGQ2 149 aa11.87□□□□□ -0.51
TRAF3-208ENST00000560371 OPN1MWP04001 364 aa11.87□□□□□ -0.51
TRAF3-208ENST00000560371 OPN1MW2P0DN77 364 aa11.87□□□□□ -0.51
TRAF3-208ENST00000560371 OPN1MW3P0DN78 364 aa11.87□□□□□ -0.51
TRAF3-208ENST00000560371 PRF1P14222 555 aa11.87□□□□□ -0.51
TRAF3-208ENST00000560371 PDZD11Q5EBL8 140 aa11.87□□□□□ -0.51
TRAF3-208ENST00000560371 DDA1Q9BW61 102 aa11.87□□□□□ -0.51
TRAF3-208ENST00000560371 PCMT1P22061 227 aa11.87□□□□□ -0.51
TRAF3-208ENST00000560371 ERVFC1-1P60608 527 aa11.87□□□□□ -0.51
TRAF3-208ENST00000560371 RASL12Q9NYN1 266 aa11.87□□□□□ -0.51
TRAF3-208ENST00000560371 MYLKQ15746 1914 aa11.87□□□□□ -0.51
TRAF3-208ENST00000560371 FOXS1O43638 330 aa11.87□□□□□ -0.51
TRAF3-208ENST00000560371 ZNF207O43670 478 aaKnown RBP11.87□□□□□ -0.51
TRAF3-208ENST00000560371 CADM3Q8N126 398 aa11.87□□□□□ -0.51
TRAF3-208ENST00000560371 RXFP4Q8TDU9 374 aa11.87□□□□□ -0.51
TRAF3-208ENST00000560371 HEXA-AS1Q9H8Q6 139 aa11.87□□□□□ -0.51
TRAF3-208ENST00000560371 C10orf35Q96D05 121 aa11.87□□□□□ -0.51
TRAF3-208ENST00000560371 GPR35Q9HC97 309 aa11.87□□□□□ -0.51
TRAF3-208ENST00000560371 MSL2Q9HCI7 577 aa11.87□□□□□ -0.51
TRAF3-208ENST00000560371 RNF7Q9UBF6 113 aa11.87□□□□□ -0.51
TRAF3-208ENST00000560371 LOC102724200A0A096LPH7 203 aaPredicted RBP11.87□□□□□ -0.51
TRAF3-208ENST00000560371 PPP1R2P9O14990 202 aa11.87□□□□□ -0.51
TRAF3-208ENST00000560371 NKX2-8O15522 239 aa11.87□□□□□ -0.51
TRAF3-208ENST00000560371 NPY1RP25929 384 aa11.87□□□□□ -0.51
TRAF3-208ENST00000560371 PIK3IP1Q96FE7 263 aa11.87□□□□□ -0.51
TRAF3-208ENST00000560371 ARFGEF3Q5TH69 2177 aa11.87□□□□□ -0.51
TRAF3-208ENST00000560371 AVPI1Q5T686 147 aa11.87□□□□□ -0.51
TRAF3-208ENST00000560371 RAB40CQ96S21 281 aa11.87□□□□□ -0.51
TRAF3-208ENST00000560371 ZNF320A2RRD8 509 aa11.86□□□□□ -0.51
TRAF3-208ENST00000560371 PEBP1P30086 187 aaKnown RBP11.86□□□□□ -0.51
TRAF3-208ENST00000560371 FFAR4Q5NUL3 377 aa11.86□□□□□ -0.51
TRAF3-208ENST00000560371 MRPS18BQ9Y676 258 aaKnown RBP11.86□□□□□ -0.51
TRAF3-208ENST00000560371 MS4A18H0YCH9 400 aa11.86□□□□□ -0.51
TRAF3-208ENST00000560371 MS4A18Q3C1V0 323 aa11.86□□□□□ -0.51
TRAF3-208ENST00000560371 C1orf185Q5T7R7 199 aa11.86□□□□□ -0.51
TRAF3-208ENST00000560371 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.86□□□□□ -0.51
TRAF3-208ENST00000560371 C17orf47Q8NEP4 570 aa11.86□□□□□ -0.51
TRAF3-208ENST00000560371 OR1L4Q8NGR5 311 aa11.86□□□□□ -0.51
TRAF3-208ENST00000560371 SLC25A40Q8TBP6 338 aa11.86□□□□□ -0.51
TRAF3-208ENST00000560371 CABLES2Q9BTV7 478 aa11.86□□□□□ -0.51
TRAF3-208ENST00000560371 PECRQ9BY49 303 aa11.86□□□□□ -0.51
TRAF3-208ENST00000560371 F5H697 171 aa11.86□□□□□ -0.51
TRAF3-208ENST00000560371 RNASEK-C17orf49H0YIS7 233 aa11.86□□□□□ -0.51
TRAF3-208ENST00000560371 K7ESF4 209 aa11.86□□□□□ -0.51
TRAF3-208ENST00000560371 BAK1Q16611 211 aa11.86□□□□□ -0.51
TRAF3-208ENST00000560371 ZNF770Q6IQ21 691 aaPredicted RBP11.86□□□□□ -0.51
TRAF3-208ENST00000560371 OR5R1Q8NH85 324 aa11.86□□□□□ -0.51
TRAF3-208ENST00000560371 DNASE2BQ8WZ79 361 aa11.86□□□□□ -0.51
TRAF3-208ENST00000560371 MAP6Q96JE9 813 aa11.86□□□□□ -0.51
TRAF3-208ENST00000560371 KCNMB2Q9Y691 235 aa11.86□□□□□ -0.51
TRAF3-208ENST00000560371 COL4A1P02462 1669 aa11.86□□□□□ -0.51
TRAF3-208ENST00000560371 CTAG2O75638 210 aa11.86□□□□□ -0.51
TRAF3-208ENST00000560371 INSL4Q14641 139 aa11.86□□□□□ -0.51
TRAF3-208ENST00000560371 COL19A1Q14993 1142 aa11.86□□□□□ -0.51
TRAF3-208ENST00000560371 ETV3LQ6ZN32 361 aa11.86□□□□□ -0.51
TRAF3-208ENST00000560371 SRRQ9GZT4 340 aa11.86□□□□□ -0.51
TRAF3-208ENST00000560371 PLAC1Q9HBJ0 212 aa11.86□□□□□ -0.51
TRAF3-208ENST00000560371 AHRRA9YTQ3 701 aa11.86□□□□□ -0.51
TRAF3-208ENST00000560371 GZMHP20718 246 aa11.86□□□□□ -0.51
TRAF3-208ENST00000560371 MRPS11P82912 194 aaKnown RBP11.86□□□□□ -0.51
TRAF3-208ENST00000560371 SPICQ8N5J4 248 aa11.86□□□□□ -0.51
TRAF3-208ENST00000560371 GDF15Q99988 308 aa11.86□□□□□ -0.51
TRAF3-208ENST00000560371 ZNF665Q9H7R5 613 aa11.86□□□□□ -0.51
TRAF3-208ENST00000560371 TMEM38BQ9NVV0 291 aa11.86□□□□□ -0.51
TRAF3-208ENST00000560371 CACNG5Q9UF02 275 aa11.86□□□□□ -0.51
TRAF3-208ENST00000560371 HAND1O96004 215 aa11.86□□□□□ -0.51
TRAF3-208ENST00000560371 SCAND1P57086 179 aa11.86□□□□□ -0.51
TRAF3-208ENST00000560371 PAX5Q02548 391 aa11.86□□□□□ -0.51
TRAF3-208ENST00000560371 SPNS3Q6ZMD2 512 aa11.86□□□□□ -0.51
TRAF3-208ENST00000560371 COA4Q9NYJ1 87 aa11.86□□□□□ -0.51
TRAF3-208ENST00000560371 CES1P1Q9UKY3 287 aa11.86□□□□□ -0.51
TRAF3-208ENST00000560371 C3orf85A0A1B0GTC6 90 aa11.85□□□□□ -0.51
TRAF3-208ENST00000560371 EPOPA6NHQ4 379 aa11.85□□□□□ -0.51
TRAF3-208ENST00000560371 G3V3Q6 166 aa11.85□□□□□ -0.51
TRAF3-208ENST00000560371 SPINK2P20155 84 aa11.85□□□□□ -0.51
TRAF3-208ENST00000560371 TNXAQ16473 311 aa11.85□□□□□ -0.51
TRAF3-208ENST00000560371 OR13D1Q8NGV5 346 aa11.85□□□□□ -0.51
TRAF3-208ENST00000560371 ZNF721Q8TF20 911 aa11.85□□□□□ -0.51
TRAF3-208ENST00000560371 PRDM6Q9NQX0 595 aa11.85□□□□□ -0.51
TRAF3-208ENST00000560371 FLRT3Q9NZU0 649 aa11.85□□□□□ -0.51
TRAF3-208ENST00000560371 DOCK11Q5JSL3 2073 aa11.85□□□□□ -0.51
TRAF3-208ENST00000560371 GTF2H5Q6ZYL4 71 aa11.85□□□□□ -0.51
TRAF3-208ENST00000560371 OR51I2Q9H344 312 aa11.85□□□□□ -0.51
TRAF3-208ENST00000560371 MTFP1Q9UDX5 166 aa11.85□□□□□ -0.51
TRAF3-208ENST00000560371 BDP1A6H8Y1 2624 aa11.85□□□□□ -0.51
TRAF3-208ENST00000560371 FNDC7Q5VTL7 733 aa11.85□□□□□ -0.51
TRAF3-208ENST00000560371 DIRC2Q96SL1 478 aa11.85□□□□□ -0.51
TRAF3-208ENST00000560371 SLC25A22Q9H936 323 aa11.85□□□□□ -0.51
TRAF3-208ENST00000560371 OR1A1Q9P1Q5 309 aa11.85□□□□□ -0.51
TRAF3-208ENST00000560371 TRDCB7Z8K6 153 aa11.85□□□□□ -0.51
TRAF3-208ENST00000560371 CRYBB2P43320 205 aa11.85□□□□□ -0.51
TRAF3-208ENST00000560371 MESTQ5EB52 335 aa11.85□□□□□ -0.51
TRAF3-208ENST00000560371 OR2H1Q9GZK4 316 aa11.85□□□□□ -0.51
TRAF3-208ENST00000560371 FGF5P12034 268 aa11.85□□□□□ -0.51
TRAF3-208ENST00000560371 TGIF1Q15583 401 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms