RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 C17orf107Q6ZR85 190 aa17.07■□□□□ 0.32
PSEN1-225ENST00000560005 SMIM4Q8WVI0 70 aa17.07■□□□□ 0.32
PSEN1-225ENST00000560005 ELL3Q9HB65 397 aaPredicted RBP17.07■□□□□ 0.32
PSEN1-225ENST00000560005 C14orf119Q9NWQ9 140 aa17.07■□□□□ 0.32
PSEN1-225ENST00000560005 INSIG2Q9Y5U4 225 aa17.07■□□□□ 0.32
PSEN1-225ENST00000560005 TRAV18A0A075B6X5 111 aa17.06■□□□□ 0.32
PSEN1-225ENST00000560005 IGHV3OR16-10A0A075B7F0 116 aa17.06■□□□□ 0.32
PSEN1-225ENST00000560005 TMEM210A6NLX4 147 aa17.06■□□□□ 0.32
PSEN1-225ENST00000560005 ZNF732B4DXR9 585 aa17.06■□□□□ 0.32
PSEN1-225ENST00000560005 MPIG6BO95866 241 aa17.06■□□□□ 0.32
PSEN1-225ENST00000560005 GSTT2BP0CG30 244 aa17.06■□□□□ 0.32
PSEN1-225ENST00000560005 GTF2F2P13984 249 aa17.06■□□□□ 0.32
PSEN1-225ENST00000560005 EFNB2P52799 333 aa17.06■□□□□ 0.32
PSEN1-225ENST00000560005 PRSS12P56730 875 aa17.06■□□□□ 0.32
PSEN1-225ENST00000560005 AP3S2P59780 193 aa17.06■□□□□ 0.32
PSEN1-225ENST00000560005 IFITM3Q01628 133 aa17.06■□□□□ 0.32
PSEN1-225ENST00000560005 SSBP1Q04837 148 aaKnown RBP17.06■□□□□ 0.32
PSEN1-225ENST00000560005 KIR3DL3Q8N743 410 aa17.06■□□□□ 0.32
PSEN1-225ENST00000560005 POC5Q8NA72 575 aa17.06■□□□□ 0.32
PSEN1-225ENST00000560005 BHLHE23Q8NDY6 225 aa17.06■□□□□ 0.32
PSEN1-225ENST00000560005 OR13G1Q8NGZ3 307 aa17.06■□□□□ 0.32
PSEN1-225ENST00000560005 PKIBQ9C010 78 aa17.06■□□□□ 0.32
PSEN1-225ENST00000560005 SCPEP1Q9HB40 452 aa17.06■□□□□ 0.32
PSEN1-225ENST00000560005 AKR7A2O43488 359 aa17.05■□□□□ 0.32
PSEN1-225ENST00000560005 ECDO95905 644 aaPredicted RBP17.05■□□□□ 0.32
PSEN1-225ENST00000560005 PTTG1O95997 202 aa17.05■□□□□ 0.32
PSEN1-225ENST00000560005 IGHV4-38-2P0DP08 117 aa17.05■□□□□ 0.32
PSEN1-225ENST00000560005 CA6P23280 308 aa17.05■□□□□ 0.32
PSEN1-225ENST00000560005 CPT2P23786 658 aa17.05■□□□□ 0.32
PSEN1-225ENST00000560005 PRSS3P35030 304 aa17.05■□□□□ 0.32
PSEN1-225ENST00000560005 GPM6AP51674 278 aa17.05■□□□□ 0.32
PSEN1-225ENST00000560005 SEC61A1P61619 476 aaKnown RBP17.05■□□□□ 0.32
PSEN1-225ENST00000560005 RPS27AP62979 156 aaKnown RBP17.05■□□□□ 0.32
PSEN1-225ENST00000560005 UNC119Q13432 240 aa17.05■□□□□ 0.32
PSEN1-225ENST00000560005 ASAH1Q13510 395 aa17.05■□□□□ 0.32
PSEN1-225ENST00000560005 OR8G1Q15617 311 aa17.05■□□□□ 0.32
PSEN1-225ENST00000560005 TRIM16LQ309B1 348 aa17.05■□□□□ 0.32
PSEN1-225ENST00000560005 TMEM255AQ5JRV8 349 aa17.05■□□□□ 0.32
PSEN1-225ENST00000560005 MZT2BQ6NZ67 158 aa17.05■□□□□ 0.32
PSEN1-225ENST00000560005 CRIP3Q6Q6R5 217 aa17.05■□□□□ 0.32
PSEN1-225ENST00000560005 SNX29P2Q8IUI4 249 aa17.05■□□□□ 0.32
PSEN1-225ENST00000560005 OR5D18Q8NGL1 313 aa17.05■□□□□ 0.32
PSEN1-225ENST00000560005 CHPT1Q8WUD6 406 aa17.05■□□□□ 0.32
PSEN1-225ENST00000560005 DEDD2Q8WXF8 326 aa17.05■□□□□ 0.32
PSEN1-225ENST00000560005 EGLN1Q9GZT9 426 aa17.05■□□□□ 0.32
PSEN1-225ENST00000560005 DCAF16Q9NXF7 216 aa17.05■□□□□ 0.32
PSEN1-225ENST00000560005 TAS2R8Q9NYW2 309 aa17.05■□□□□ 0.32
PSEN1-225ENST00000560005 POLR3KQ9Y2Y1 108 aaPredicted RBP17.05■□□□□ 0.32
PSEN1-225ENST00000560005 NPTNQ9Y639 398 aa17.05■□□□□ 0.32
PSEN1-225ENST00000560005 TANC2Q9HCD6 1990 aa17.05■□□□□ 0.32
PSEN1-225ENST00000560005 IGKV1-27A0A075B6S5 117 aa17.04■□□□□ 0.32
PSEN1-225ENST00000560005 MDFIC2A0A1B0GVS7 189 aa17.04■□□□□ 0.32
PSEN1-225ENST00000560005 A0A1W2PQ09 198 aa17.04■□□□□ 0.32
PSEN1-225ENST00000560005 PLSCR5A0PG75 271 aa17.04■□□□□ 0.32
PSEN1-225ENST00000560005 ZSCAN5BA6NJL1 495 aa17.04■□□□□ 0.32
PSEN1-225ENST00000560005 CENPXA8MT69 81 aa17.04■□□□□ 0.32
PSEN1-225ENST00000560005 M0QZ24 198 aa17.04■□□□□ 0.32
PSEN1-225ENST00000560005 IGHV2-70P01814 119 aa17.04■□□□□ 0.32
PSEN1-225ENST00000560005 MGMTP16455 207 aa17.04■□□□□ 0.32
PSEN1-225ENST00000560005 MPV17P39210 176 aa17.04■□□□□ 0.32
PSEN1-225ENST00000560005 SPRNQ5BIV9 151 aa17.04■□□□□ 0.32
PSEN1-225ENST00000560005 OR10K2Q6IF99 312 aa17.04■□□□□ 0.32
PSEN1-225ENST00000560005 BRICD5Q6PL45 260 aa17.04■□□□□ 0.32
PSEN1-225ENST00000560005 FAM89BQ8N5H3 189 aa17.04■□□□□ 0.32
PSEN1-225ENST00000560005 OR10R2Q8NGX6 335 aa17.04■□□□□ 0.32
PSEN1-225ENST00000560005 HPSE2Q8WWQ2 592 aa17.04■□□□□ 0.32
PSEN1-225ENST00000560005 NKX3-1Q99801 234 aaPredicted RBP17.04■□□□□ 0.32
PSEN1-225ENST00000560005 C7orf50Q9BRJ6 194 aaKnown RBP17.04■□□□□ 0.32
PSEN1-225ENST00000560005 TM2D1Q9BX74 207 aa17.04■□□□□ 0.32
PSEN1-225ENST00000560005 LPAR5Q9H1C0 372 aa17.04■□□□□ 0.32
PSEN1-225ENST00000560005 KMT2CQ8NEZ4 4911 aaKnown RBP17.03■□□□□ 0.32
PSEN1-225ENST00000560005 A0A1B0GUS0 222 aa17.03■□□□□ 0.32
PSEN1-225ENST00000560005 RAB27BO00194 218 aa17.03■□□□□ 0.32
PSEN1-225ENST00000560005 HTR3BO95264 441 aa17.03■□□□□ 0.32
PSEN1-225ENST00000560005 GSTP1P09211 210 aaKnown RBP17.03■□□□□ 0.32
PSEN1-225ENST00000560005 SERPINA2P20848 420 aa17.03■□□□□ 0.32
PSEN1-225ENST00000560005 RBMXP38159 391 aaKnown RBP17.03■□□□□ 0.32
PSEN1-225ENST00000560005 HAAOP46952 286 aa17.03■□□□□ 0.32
PSEN1-225ENST00000560005 PLA2G7Q13093 441 aa17.03■□□□□ 0.32
PSEN1-225ENST00000560005 FAM76BQ5HYJ3 339 aa17.03■□□□□ 0.32
PSEN1-225ENST00000560005 ZNF57Q68EA5 555 aaPredicted RBP17.03■□□□□ 0.32
PSEN1-225ENST00000560005 RNF144BQ7Z419 303 aa17.03■□□□□ 0.32
PSEN1-225ENST00000560005 C1QL4Q86Z23 238 aa17.03■□□□□ 0.32
PSEN1-225ENST00000560005 IZUMO1Q8IYV9 350 aa17.03■□□□□ 0.32
PSEN1-225ENST00000560005 SPICQ8N5J4 248 aa17.03■□□□□ 0.32
PSEN1-225ENST00000560005 DTX3Q8N9I9 347 aa17.03■□□□□ 0.32
PSEN1-225ENST00000560005 Q8NFD4 153 aa17.03■□□□□ 0.32
PSEN1-225ENST00000560005 OR51T1Q8NGJ9 327 aa17.03■□□□□ 0.32
PSEN1-225ENST00000560005 CITED1Q99966 193 aa17.03■□□□□ 0.32
PSEN1-225ENST00000560005 ADAT1Q9BUB4 502 aaKnown RBP17.03■□□□□ 0.32
PSEN1-225ENST00000560005 AUNIPQ9H7T9 357 aa17.03■□□□□ 0.32
PSEN1-225ENST00000560005 PATZ1Q9HBE1 687 aaKnown RBP17.03■□□□□ 0.32
PSEN1-225ENST00000560005 BEX1Q9HBH7 125 aa17.03■□□□□ 0.32
PSEN1-225ENST00000560005 POLDIP2Q9Y2S7 368 aa17.03■□□□□ 0.32
PSEN1-225ENST00000560005 FAM90A10PA6NDY2 464 aa17.02■□□□□ 0.32
PSEN1-225ENST00000560005 FAM90A18PA6NE21 464 aa17.02■□□□□ 0.32
PSEN1-225ENST00000560005 FAM181BA6NEQ2 426 aa17.02■□□□□ 0.32
PSEN1-225ENST00000560005 FAM90A16PA6NEW6 464 aa17.02■□□□□ 0.32
PSEN1-225ENST00000560005 FAM90A20PA6NIJ5 464 aa17.02■□□□□ 0.32
PSEN1-225ENST00000560005 FAM90A8PA6NJQ4 464 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms