RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 METRNLQ641Q3 311 aa12.34□□□□□ -0.43
CSPG4P12-202ENST00000559989 SCN9AQ15858 1988 aa12.34□□□□□ -0.43
CSPG4P12-202ENST00000559989 SCAND1P57086 179 aa12.34□□□□□ -0.43
CSPG4P12-202ENST00000559989 ALG14Q96F25 216 aa12.34□□□□□ -0.43
CSPG4P12-202ENST00000559989 GHITMQ9H3K2 345 aa12.34□□□□□ -0.43
CSPG4P12-202ENST00000559989 R3HDM4Q96D70 268 aa12.33□□□□□ -0.44
CSPG4P12-202ENST00000559989 CYSLTR2Q9NS75 346 aa12.33□□□□□ -0.44
CSPG4P12-202ENST00000559989 DNAJB12Q9NXW2 375 aaKnown RBP12.33□□□□□ -0.44
CSPG4P12-202ENST00000559989 TRAV8-7A0A075B6U6 113 aa12.33□□□□□ -0.44
CSPG4P12-202ENST00000559989 HOXA6P31267 233 aa12.33□□□□□ -0.44
CSPG4P12-202ENST00000559989 LDLRAD3Q86YD5 345 aa12.33□□□□□ -0.44
CSPG4P12-202ENST00000559989 TXNRD2Q9NNW7 524 aa12.33□□□□□ -0.44
CSPG4P12-202ENST00000559989 MMP9P14780 707 aa12.33□□□□□ -0.44
CSPG4P12-202ENST00000559989 RAC3P60763 192 aa12.33□□□□□ -0.44
CSPG4P12-202ENST00000559989 WFDC3Q8IUB2 231 aa12.33□□□□□ -0.44
CSPG4P12-202ENST00000559989 HS3ST2Q9Y278 367 aa12.33□□□□□ -0.44
CSPG4P12-202ENST00000559989 NEURL4Q96JN8 1562 aa12.33□□□□□ -0.44
CSPG4P12-202ENST00000559989 TRDCB7Z8K6 153 aa12.33□□□□□ -0.44
CSPG4P12-202ENST00000559989 CXCL13O43927 109 aa12.33□□□□□ -0.44
CSPG4P12-202ENST00000559989 GPR3P46089 330 aa12.33□□□□□ -0.44
CSPG4P12-202ENST00000559989 ETFBKMTQ8IXQ9 262 aa12.33□□□□□ -0.44
CSPG4P12-202ENST00000559989 B9D1Q9UPM9 204 aa12.33□□□□□ -0.44
CSPG4P12-202ENST00000559989 EMDP50402 254 aa12.33□□□□□ -0.44
CSPG4P12-202ENST00000559989 TMEM33P57088 247 aa12.33□□□□□ -0.44
CSPG4P12-202ENST00000559989 MUC20Q8N307 709 aaPredicted RBP12.33□□□□□ -0.44
CSPG4P12-202ENST00000559989 ZNF418Q8TF45 676 aaPredicted RBP12.33□□□□□ -0.44
CSPG4P12-202ENST00000559989 PLPPR2Q96GM1 343 aa12.33□□□□□ -0.44
CSPG4P12-202ENST00000559989 FZR1Q9UM11 496 aa12.33□□□□□ -0.44
CSPG4P12-202ENST00000559989 DAPP1Q9UN19 280 aa12.33□□□□□ -0.44
CSPG4P12-202ENST00000559989 A0A0B4J293 547 aa12.33□□□□□ -0.44
CSPG4P12-202ENST00000559989 MED19A0JLT2 244 aaPredicted RBP12.33□□□□□ -0.44
CSPG4P12-202ENST00000559989 NPPBP16860 134 aa12.33□□□□□ -0.44
CSPG4P12-202ENST00000559989 GALP22466 123 aa12.33□□□□□ -0.44
CSPG4P12-202ENST00000559989 WNT5AP41221 380 aa12.33□□□□□ -0.44
CSPG4P12-202ENST00000559989 MS4A6EQ96DS6 147 aa12.33□□□□□ -0.44
CSPG4P12-202ENST00000559989 MED29Q9NX70 200 aa12.33□□□□□ -0.44
CSPG4P12-202ENST00000559989 UBR2Q8IWV8 1755 aa12.32□□□□□ -0.44
CSPG4P12-202ENST00000559989 TRAV38-1A0A0B4J264 116 aa12.32□□□□□ -0.44
CSPG4P12-202ENST00000559989 CDC14BO60729 498 aa12.32□□□□□ -0.44
CSPG4P12-202ENST00000559989 FCGR3AP08637 254 aa12.32□□□□□ -0.44
CSPG4P12-202ENST00000559989 CCL17Q92583 94 aa12.32□□□□□ -0.44
CSPG4P12-202ENST00000559989 ISOC2Q96AB3 205 aa12.32□□□□□ -0.44
CSPG4P12-202ENST00000559989 BEX4Q9NWD9 120 aaPredicted RBP12.32□□□□□ -0.44
CSPG4P12-202ENST00000559989 NUP188Q5SRE5 1749 aa12.32□□□□□ -0.44
CSPG4P12-202ENST00000559989 CA6P23280 308 aa12.32□□□□□ -0.44
CSPG4P12-202ENST00000559989 ZNF83P51522 516 aa12.32□□□□□ -0.44
CSPG4P12-202ENST00000559989 DLX6P56179 175 aa12.32□□□□□ -0.44
CSPG4P12-202ENST00000559989 LRRC75BQ2VPJ9 315 aa12.32□□□□□ -0.44
CSPG4P12-202ENST00000559989 TMEM52BQ4KMG9 183 aa12.32□□□□□ -0.44
CSPG4P12-202ENST00000559989 PABPC1L2AQ5JQF8 200 aa12.32□□□□□ -0.44
CSPG4P12-202ENST00000559989 TM4SF19Q96DZ7 209 aa12.32□□□□□ -0.44
CSPG4P12-202ENST00000559989 MRPL16Q9NX20 251 aaKnown RBP12.32□□□□□ -0.44
CSPG4P12-202ENST00000559989 SCN3AQ9NY46 2000 aa12.32□□□□□ -0.44
CSPG4P12-202ENST00000559989 TMEM210A6NLX4 147 aa12.32□□□□□ -0.44
CSPG4P12-202ENST00000559989 CDX4O14627 284 aaPredicted RBP12.32□□□□□ -0.44
CSPG4P12-202ENST00000559989 ASB5Q8WWX0 329 aa12.32□□□□□ -0.44
CSPG4P12-202ENST00000559989 C20orf27Q9GZN8 174 aa12.32□□□□□ -0.44
CSPG4P12-202ENST00000559989 HIGD1AQ9Y241 93 aa12.32□□□□□ -0.44
CSPG4P12-202ENST00000559989 HKR1P10072 659 aa12.32□□□□□ -0.44
CSPG4P12-202ENST00000559989 TMEM108Q6UXF1 575 aa12.32□□□□□ -0.44
CSPG4P12-202ENST00000559989 A8MWL6 223 aa12.32□□□□□ -0.44
CSPG4P12-202ENST00000559989 CD27P26842 260 aa12.32□□□□□ -0.44
CSPG4P12-202ENST00000559989 PMELP40967 661 aa12.32□□□□□ -0.44
CSPG4P12-202ENST00000559989 TEX30Q5JUR7 227 aa12.32□□□□□ -0.44
CSPG4P12-202ENST00000559989 TMEM211Q6ICI0 200 aa12.32□□□□□ -0.44
CSPG4P12-202ENST00000559989 TBX21Q9UL17 535 aa12.32□□□□□ -0.44
CSPG4P12-202ENST00000559989 FAM78AQ5JUQ0 283 aa12.32□□□□□ -0.44
CSPG4P12-202ENST00000559989 H3BQ15 152 aa12.31□□□□□ -0.44
CSPG4P12-202ENST00000559989 RAB1CQ92928 201 aa12.31□□□□□ -0.44
CSPG4P12-202ENST00000559989 HSPB9Q9BQS6 159 aa12.31□□□□□ -0.44
CSPG4P12-202ENST00000559989 PRNDQ9UKY0 176 aa12.31□□□□□ -0.44
CSPG4P12-202ENST00000559989 SNED1Q8TER0 1413 aa12.31□□□□□ -0.44
CSPG4P12-202ENST00000559989 IDSB3KWA1 339 aa12.31□□□□□ -0.44
CSPG4P12-202ENST00000559989 FAM157AC9JC47 383 aa12.31□□□□□ -0.44
CSPG4P12-202ENST00000559989 OTOSQ8NHW6 89 aa12.31□□□□□ -0.44
CSPG4P12-202ENST00000559989 HSF4Q9ULV5 492 aa12.31□□□□□ -0.44
CSPG4P12-202ENST00000559989 F11P03951 625 aa12.31□□□□□ -0.44
CSPG4P12-202ENST00000559989 MRPL30Q8TCC3 161 aaKnown RBP12.31□□□□□ -0.44
CSPG4P12-202ENST00000559989 PPT2Q9UMR5 302 aa12.31□□□□□ -0.44
CSPG4P12-202ENST00000559989 ZFC3H1O60293 1989 aaKnown RBP12.31□□□□□ -0.44
CSPG4P12-202ENST00000559989 PTGESO14684 152 aa12.31□□□□□ -0.44
CSPG4P12-202ENST00000559989 FOLR2P14207 255 aa12.31□□□□□ -0.44
CSPG4P12-202ENST00000559989 TNFSF10P50591 281 aa12.31□□□□□ -0.44
CSPG4P12-202ENST00000559989 MRPL43Q8N983 215 aaKnown RBP12.31□□□□□ -0.44
CSPG4P12-202ENST00000559989 TRGV5A0A0B4J1U4 118 aa12.31□□□□□ -0.44
CSPG4P12-202ENST00000559989 DHHO43323 396 aa12.31□□□□□ -0.44
CSPG4P12-202ENST00000559989 TMEM95Q3KNT9 176 aa12.31□□□□□ -0.44
CSPG4P12-202ENST00000559989 SLC25A40Q8TBP6 338 aa12.31□□□□□ -0.44
CSPG4P12-202ENST00000559989 PHLDA1Q8WV24 401 aaPredicted RBP12.31□□□□□ -0.44
CSPG4P12-202ENST00000559989 C16orf92Q96LL3 132 aa12.31□□□□□ -0.44
CSPG4P12-202ENST00000559989 FOXB1Q99853 325 aa12.31□□□□□ -0.44
CSPG4P12-202ENST00000559989 C2orf88Q9BSF0 95 aa12.31□□□□□ -0.44
CSPG4P12-202ENST00000559989 SLC52A3Q9NQ40 469 aa12.31□□□□□ -0.44
CSPG4P12-202ENST00000559989 RBMY1BA6NDE4 496 aaKnown RBP12.31□□□□□ -0.44
CSPG4P12-202ENST00000559989 RBMY1EA6NEQ0 496 aaKnown RBP12.31□□□□□ -0.44
CSPG4P12-202ENST00000559989 RBMY1DP0C7P1 496 aaKnown RBP12.31□□□□□ -0.44
CSPG4P12-202ENST00000559989 RBMY1A1P0DJD3 496 aaKnown RBP12.31□□□□□ -0.44
CSPG4P12-202ENST00000559989 RBMY1CP0DJD4 496 aa12.31□□□□□ -0.44
CSPG4P12-202ENST00000559989 CEACAM16Q2WEN9 425 aa12.31□□□□□ -0.44
CSPG4P12-202ENST00000559989 TMEM78Q5T7P6 136 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms