RNA–Protein interactions for RNA: ENST00000559931.5

SMAD6-204, Transcript of SMAD family member 6, humanhuman

TSL 3

Gene SMAD6, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-204ENST00000559931 SCAND1P57086 179 aa11.93□□□□□ -0.5
SMAD6-204ENST00000559931 SEC61A1P61619 476 aaKnown RBP11.93□□□□□ -0.5
SMAD6-204ENST00000559931 GRK1Q15835 563 aa11.93□□□□□ -0.5
SMAD6-204ENST00000559931 FOXB2Q5VYV0 432 aa11.93□□□□□ -0.5
SMAD6-204ENST00000559931 RAB12Q6IQ22 244 aa11.93□□□□□ -0.5
SMAD6-204ENST00000559931 SPNS3Q6ZMD2 512 aa11.93□□□□□ -0.5
SMAD6-204ENST00000559931 GDPD3Q7L5L3 318 aa11.93□□□□□ -0.5
SMAD6-204ENST00000559931 BPIFB2Q8N4F0 458 aa11.93□□□□□ -0.5
SMAD6-204ENST00000559931 SUMF2Q8NBJ7 301 aa11.93□□□□□ -0.5
SMAD6-204ENST00000559931 OR56B1Q8NGI3 324 aa11.93□□□□□ -0.5
SMAD6-204ENST00000559931 PTX4Q96A99 478 aa11.93□□□□□ -0.5
SMAD6-204ENST00000559931 POM121Q96HA1 1249 aa11.93□□□□□ -0.5
SMAD6-204ENST00000559931 DPCDQ9BVM2 203 aaPredicted RBP11.93□□□□□ -0.5
SMAD6-204ENST00000559931 TM2D1Q9BX74 207 aa11.93□□□□□ -0.5
SMAD6-204ENST00000559931 PPA2Q9H2U2 334 aa11.93□□□□□ -0.5
SMAD6-204ENST00000559931 SPACA1Q9HBV2 294 aa11.93□□□□□ -0.5
SMAD6-204ENST00000559931 LPAR2Q9HBW0 351 aa11.93□□□□□ -0.5
SMAD6-204ENST00000559931 PLEKHJ1Q9NW61 149 aa11.93□□□□□ -0.5
SMAD6-204ENST00000559931 CCDC59Q9P031 241 aaKnown RBP11.93□□□□□ -0.5
SMAD6-204ENST00000559931 MALRD1Q5VYJ5 2156 aa11.93□□□□□ -0.5
SMAD6-204ENST00000559931 ARHGAP32A7KAX9 2087 aa11.93□□□□□ -0.5
SMAD6-204ENST00000559931 CR1P17927 2039 aa11.93□□□□□ -0.5
SMAD6-204ENST00000559931 ZNF469Q96JG9 3925 aaPredicted RBP11.92□□□□□ -0.5
SMAD6-204ENST00000559931 TRAV24A0A0B4J272 114 aa11.92□□□□□ -0.5
SMAD6-204ENST00000559931 F5H0A9 414 aaPredicted RBP11.92□□□□□ -0.5
SMAD6-204ENST00000559931 K7N7A8 449 aa11.92□□□□□ -0.5
SMAD6-204ENST00000559931 SOCS1O15524 211 aa11.92□□□□□ -0.5
SMAD6-204ENST00000559931 RGS5O15539 181 aa11.92□□□□□ -0.5
SMAD6-204ENST00000559931 FOXH1O75593 365 aa11.92□□□□□ -0.5
SMAD6-204ENST00000559931 LMO1P25800 156 aa11.92□□□□□ -0.5
SMAD6-204ENST00000559931 LCN2P80188 198 aa11.92□□□□□ -0.5
SMAD6-204ENST00000559931 RBM39Q14498 530 aaKnown RBP11.92□□□□□ -0.5
SMAD6-204ENST00000559931 EDDM3AQ14507 147 aa11.92□□□□□ -0.5
SMAD6-204ENST00000559931 WDR25Q64LD2 544 aaPredicted RBP11.92□□□□□ -0.5
SMAD6-204ENST00000559931 CIARTQ8N365 385 aaPredicted RBP11.92□□□□□ -0.5
SMAD6-204ENST00000559931 FGFRL1Q8N441 504 aa11.92□□□□□ -0.5
SMAD6-204ENST00000559931 OR4S1Q8NGB4 309 aa11.92□□□□□ -0.5
SMAD6-204ENST00000559931 MCFD2Q8NI22 146 aa11.92□□□□□ -0.5
SMAD6-204ENST00000559931 S100A16Q96FQ6 103 aaKnown RBP11.92□□□□□ -0.5
SMAD6-204ENST00000559931 FAM234AQ9H0X4 552 aa11.92□□□□□ -0.5
SMAD6-204ENST00000559931 RHBDL2Q9NX52 303 aa11.92□□□□□ -0.5
SMAD6-204ENST00000559931 ZNF581Q9P0T4 197 aa11.92□□□□□ -0.5
SMAD6-204ENST00000559931 A0A075B6Q4 140 aa11.91□□□□□ -0.5
SMAD6-204ENST00000559931 LOC105371242A0A075B767 164 aa11.91□□□□□ -0.5
SMAD6-204ENST00000559931 UBE2QL1A1L167 161 aa11.91□□□□□ -0.5
SMAD6-204ENST00000559931 FAM25AB3EWG3 89 aa11.91□□□□□ -0.5
SMAD6-204ENST00000559931 FAM25CB3EWG5 89 aa11.91□□□□□ -0.5
SMAD6-204ENST00000559931 FAM25GB3EWG6 89 aa11.91□□□□□ -0.5
SMAD6-204ENST00000559931 FAM157AC9JC47 383 aa11.91□□□□□ -0.5
SMAD6-204ENST00000559931 PSPNO60542 156 aa11.91□□□□□ -0.5
SMAD6-204ENST00000559931 HPGDSO60760 199 aa11.91□□□□□ -0.5
SMAD6-204ENST00000559931 PDCD6O75340 191 aa11.91□□□□□ -0.5
SMAD6-204ENST00000559931 ZNF737O75373 536 aa11.91□□□□□ -0.5
SMAD6-204ENST00000559931 OR3A1P47881 315 aa11.91□□□□□ -0.5
SMAD6-204ENST00000559931 EDDM3BP56851 147 aa11.91□□□□□ -0.5
SMAD6-204ENST00000559931 DYNC1I2Q13409 638 aaKnown RBP11.91□□□□□ -0.5
SMAD6-204ENST00000559931 UBE2NLQ5JXB2 153 aa11.91□□□□□ -0.5
SMAD6-204ENST00000559931 CD276Q5ZPR3 534 aa11.91□□□□□ -0.5
SMAD6-204ENST00000559931 ZNF841Q6ZN19 808 aa11.91□□□□□ -0.5
SMAD6-204ENST00000559931 C17orf107Q6ZR85 190 aa11.91□□□□□ -0.5
SMAD6-204ENST00000559931 Q6ZTK2 550 aa11.91□□□□□ -0.5
SMAD6-204ENST00000559931 BTN2A1Q7KYR7 527 aa11.91□□□□□ -0.5
SMAD6-204ENST00000559931 OR8H2Q8N162 312 aa11.91□□□□□ -0.5
SMAD6-204ENST00000559931 FAM89BQ8N5H3 189 aa11.91□□□□□ -0.5
SMAD6-204ENST00000559931 OR10R2Q8NGX6 335 aa11.91□□□□□ -0.5
SMAD6-204ENST00000559931 TSC22D3Q99576 134 aa11.91□□□□□ -0.5
SMAD6-204ENST00000559931 C6orf62Q9GZU0 229 aaPredicted RBP11.91□□□□□ -0.5
SMAD6-204ENST00000559931 IFT22Q9H7X7 185 aa11.91□□□□□ -0.5
SMAD6-204ENST00000559931 DIABLOQ9NR28 239 aa11.91□□□□□ -0.5
SMAD6-204ENST00000559931 TEP1Q99973 2627 aaKnown RBP11.9□□□□□ -0.5
SMAD6-204ENST00000559931 KIAA2026Q5HYC2 2103 aa11.9□□□□□ -0.5
SMAD6-204ENST00000559931 WNK2Q9Y3S1 2297 aa11.9□□□□□ -0.5
SMAD6-204ENST00000559931 A0A096LNT2 108 aa11.9□□□□□ -0.5
SMAD6-204ENST00000559931 A0A0A6YYD4 124 aa11.9□□□□□ -0.5
SMAD6-204ENST00000559931 FUOMA2VDF0 154 aa11.9□□□□□ -0.5
SMAD6-204ENST00000559931 B4DSR2 109 aa11.9□□□□□ -0.5
SMAD6-204ENST00000559931 MGST3O14880 152 aa11.9□□□□□ -0.5
SMAD6-204ENST00000559931 GPR37O15354 613 aa11.9□□□□□ -0.5
SMAD6-204ENST00000559931 SCGNO76038 276 aa11.9□□□□□ -0.5
SMAD6-204ENST00000559931 ECDO95905 644 aaPredicted RBP11.9□□□□□ -0.5
SMAD6-204ENST00000559931 ZFP36P26651 326 aaKnown RBP11.9□□□□□ -0.5
SMAD6-204ENST00000559931 GZMKP49863 264 aa11.9□□□□□ -0.5
SMAD6-204ENST00000559931 AESQ08117 197 aa11.9□□□□□ -0.5
SMAD6-204ENST00000559931 ATXN7L3Q14CW9 347 aaPredicted RBP11.9□□□□□ -0.5
SMAD6-204ENST00000559931 TMEM249Q2WGJ8 235 aa11.9□□□□□ -0.5
SMAD6-204ENST00000559931 CYB5R2Q6BCY4 276 aa11.9□□□□□ -0.5
SMAD6-204ENST00000559931 SIGIRRQ6IA17 410 aa11.9□□□□□ -0.5
SMAD6-204ENST00000559931 C6orf201Q7Z4U5 140 aa11.9□□□□□ -0.5
SMAD6-204ENST00000559931 CMTM4Q8IZR5 234 aa11.9□□□□□ -0.5
SMAD6-204ENST00000559931 DTX3Q8N9I9 347 aa11.9□□□□□ -0.5
SMAD6-204ENST00000559931 LINC01356Q8N9X3 169 aa11.9□□□□□ -0.5
SMAD6-204ENST00000559931 OR4M1Q8NGD0 313 aa11.9□□□□□ -0.5
SMAD6-204ENST00000559931 RAB3CQ96E17 227 aa11.9□□□□□ -0.5
SMAD6-204ENST00000559931 FAAP24Q9BTP7 215 aa11.9□□□□□ -0.5
SMAD6-204ENST00000559931 SHARPINQ9H0F6 387 aa11.9□□□□□ -0.5
SMAD6-204ENST00000559931 A0A1W2PQ09 198 aa11.89□□□□□ -0.51
SMAD6-204ENST00000559931 CTDSP2O14595 271 aa11.89□□□□□ -0.51
SMAD6-204ENST00000559931 TGFAP01135 160 aa11.89□□□□□ -0.51
SMAD6-204ENST00000559931 GLAP06280 429 aa11.89□□□□□ -0.51
SMAD6-204ENST00000559931 CHATP28329 748 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms