RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 STRADBQ9C0K7 418 aa8.62□□□□□ -1.03
LRRC28-216ENST00000559819 SAV1Q9H4B6 383 aaPredicted RBP8.62□□□□□ -1.03
LRRC28-216ENST00000559819 PLEKHA2Q9HB19 425 aa8.62□□□□□ -1.03
LRRC28-216ENST00000559819 MTCH1Q9NZJ7 389 aa8.62□□□□□ -1.03
LRRC28-216ENST00000559819 RFNGQ9Y644 331 aa8.62□□□□□ -1.03
LRRC28-216ENST00000559819 AHCTF1Q8WYP5 2266 aa8.62□□□□□ -1.03
LRRC28-216ENST00000559819 C3orf85A0A1B0GTC6 90 aa8.62□□□□□ -1.03
LRRC28-216ENST00000559819 SLC33A1O00400 549 aaPredicted RBP8.62□□□□□ -1.03
LRRC28-216ENST00000559819 GPR137BO60478 399 aa8.62□□□□□ -1.03
LRRC28-216ENST00000559819 PVALBP20472 110 aaPredicted RBP8.62□□□□□ -1.03
LRRC28-216ENST00000559819 GNRHRP30968 328 aa8.62□□□□□ -1.03
LRRC28-216ENST00000559819 MPLP40238 635 aa8.62□□□□□ -1.03
LRRC28-216ENST00000559819 SPIN3Q5JUX0 258 aa8.62□□□□□ -1.03
LRRC28-216ENST00000559819 TBC1D26Q86UD7 250 aa8.62□□□□□ -1.03
LRRC28-216ENST00000559819 TMEM251Q8N6I4 163 aa8.62□□□□□ -1.03
LRRC28-216ENST00000559819 USB1Q9BQ65 265 aaKnown RBP8.62□□□□□ -1.03
LRRC28-216ENST00000559819 SYT3Q9BQG1 590 aa8.62□□□□□ -1.03
LRRC28-216ENST00000559819 ZNF552Q9H707 407 aaPredicted RBP8.62□□□□□ -1.03
LRRC28-216ENST00000559819 PARP11Q9NR21 331 aa8.62□□□□□ -1.03
LRRC28-216ENST00000559819 GPR179Q6PRD1 2367 aa8.62□□□□□ -1.03
LRRC28-216ENST00000559819 IGKV1D-13A0A0B4J2D9 117 aa8.61□□□□□ -1.03
LRRC28-216ENST00000559819 A0A1B0GV50 99 aa8.61□□□□□ -1.03
LRRC28-216ENST00000559819 MPPED1O15442 326 aa8.61□□□□□ -1.03
LRRC28-216ENST00000559819 NXPH3O95157 252 aa8.61□□□□□ -1.03
LRRC28-216ENST00000559819 SNAPINO95295 136 aa8.61□□□□□ -1.03
LRRC28-216ENST00000559819 SYNGR4O95473 234 aa8.61□□□□□ -1.03
LRRC28-216ENST00000559819 CD5P06127 495 aa8.61□□□□□ -1.03
LRRC28-216ENST00000559819 IGKV1-13P0DP09 117 aa8.61□□□□□ -1.03
LRRC28-216ENST00000559819 UCP3P55916 312 aa8.61□□□□□ -1.03
LRRC28-216ENST00000559819 PLGLB1Q02325 96 aa8.61□□□□□ -1.03
LRRC28-216ENST00000559819 HERPUD1Q15011 391 aa8.61□□□□□ -1.03
LRRC28-216ENST00000559819 SWI5Q1ZZU3 235 aa8.61□□□□□ -1.03
LRRC28-216ENST00000559819 MIDNQ504T8 468 aa8.61□□□□□ -1.03
LRRC28-216ENST00000559819 ZDHHC23Q8IYP9 409 aa8.61□□□□□ -1.03
LRRC28-216ENST00000559819 SPAG16Q8N0X2 631 aa8.61□□□□□ -1.03
LRRC28-216ENST00000559819 HSD17B11Q8NBQ5 300 aa8.61□□□□□ -1.03
LRRC28-216ENST00000559819 OR4D5Q8NGN0 318 aa8.61□□□□□ -1.03
LRRC28-216ENST00000559819 TECTBQ96PL2 329 aa8.61□□□□□ -1.03
LRRC28-216ENST00000559819 LINC00470Q9BZP3 86 aa8.61□□□□□ -1.03
LRRC28-216ENST00000559819 FBXO9Q9UK97 447 aaPredicted RBP8.61□□□□□ -1.03
LRRC28-216ENST00000559819 LIPGQ9Y5X9 500 aa8.61□□□□□ -1.03
LRRC28-216ENST00000559819 FAM24AA6NFZ4 105 aa8.61□□□□□ -1.03
LRRC28-216ENST00000559819 FAM157AC9JC47 383 aa8.61□□□□□ -1.03
LRRC28-216ENST00000559819 HSD17B6O14756 317 aa8.61□□□□□ -1.03
LRRC28-216ENST00000559819 GLAP06280 429 aa8.61□□□□□ -1.03
LRRC28-216ENST00000559819 AKR1C3P42330 323 aa8.61□□□□□ -1.03
LRRC28-216ENST00000559819 F2RL1P55085 397 aa8.61□□□□□ -1.03
LRRC28-216ENST00000559819 RAB1AP62820 205 aa8.61□□□□□ -1.03
LRRC28-216ENST00000559819 ZNF616Q08AN1 781 aa8.61□□□□□ -1.03
LRRC28-216ENST00000559819 ZNF818PQ6ZRF7 136 aa8.61□□□□□ -1.03
LRRC28-216ENST00000559819 DPPA2Q7Z7J5 298 aa8.61□□□□□ -1.03
LRRC28-216ENST00000559819 VASH2Q86V25 355 aa8.61□□□□□ -1.03
LRRC28-216ENST00000559819 CCDC71LQ8N9Z2 235 aa8.61□□□□□ -1.03
LRRC28-216ENST00000559819 UBAC2Q8NBM4 344 aa8.61□□□□□ -1.03
LRRC28-216ENST00000559819 NEK7Q8TDX7 302 aa8.61□□□□□ -1.03
LRRC28-216ENST00000559819 AKR1E2Q96JD6 320 aa8.61□□□□□ -1.03
LRRC28-216ENST00000559819 C12orf49Q9H741 205 aa8.61□□□□□ -1.03
LRRC28-216ENST00000559819 Q9N2K0 584 aa8.61□□□□□ -1.03
LRRC28-216ENST00000559819 B4GALT7Q9UBV7 327 aa8.61□□□□□ -1.03
LRRC28-216ENST00000559819 NDRG3Q9UGV2 375 aa8.61□□□□□ -1.03
LRRC28-216ENST00000559819 PRSS50Q9UI38 385 aa8.61□□□□□ -1.03
LRRC28-216ENST00000559819 TECTAO75443 2155 aa8.61□□□□□ -1.03
LRRC28-216ENST00000559819 IGKV1-6A0A0C4DH72 117 aa8.6□□□□□ -1.03
LRRC28-216ENST00000559819 LNP1A1A4G5 178 aa8.6□□□□□ -1.03
LRRC28-216ENST00000559819 ST8SIA3O43173 380 aa8.6□□□□□ -1.03
LRRC28-216ENST00000559819 TNFSF12O43508 249 aa8.6□□□□□ -1.03
LRRC28-216ENST00000559819 H2AFB1P0C5Y9 115 aa8.6□□□□□ -1.03
LRRC28-216ENST00000559819 PRKACAP17612 351 aa8.6□□□□□ -1.03
LRRC28-216ENST00000559819 PPT1P50897 306 aa8.6□□□□□ -1.03
LRRC28-216ENST00000559819 FGF12P61328 243 aa8.6□□□□□ -1.03
LRRC28-216ENST00000559819 POLR2GP62487 172 aaKnown RBP eCLIP8.6□□□□□ -1.03
LRRC28-216ENST00000559819 HIKESHIQ53FT3 197 aa8.6□□□□□ -1.03
LRRC28-216ENST00000559819 GAPTQ8N292 157 aa8.6□□□□□ -1.03
LRRC28-216ENST00000559819 C17orf78Q8N4C9 275 aa8.6□□□□□ -1.03
LRRC28-216ENST00000559819 KIRREL1Q96J84 757 aa8.6□□□□□ -1.03
LRRC28-216ENST00000559819 DDA1Q9BW61 102 aa8.6□□□□□ -1.03
LRRC28-216ENST00000559819 MAGT1Q9H0U3 335 aa8.6□□□□□ -1.03
LRRC28-216ENST00000559819 ARV1Q9H2C2 271 aa8.6□□□□□ -1.03
LRRC28-216ENST00000559819 IL17BQ9UHF5 180 aa8.6□□□□□ -1.03
LRRC28-216ENST00000559819 TRDCB7Z8K6 153 aa8.6□□□□□ -1.03
LRRC28-216ENST00000559819 H7C2Y5 167 aa8.6□□□□□ -1.03
LRRC28-216ENST00000559819 P2RY1P47900 373 aa8.6□□□□□ -1.03
LRRC28-216ENST00000559819 CEACAM21Q3KPI0 293 aa8.6□□□□□ -1.03
LRRC28-216ENST00000559819 NRN1LQ496H8 165 aa8.6□□□□□ -1.03
LRRC28-216ENST00000559819 DCAF10Q5QP82 559 aa8.6□□□□□ -1.03
LRRC28-216ENST00000559819 DBX2Q6ZNG2 339 aa8.6□□□□□ -1.03
LRRC28-216ENST00000559819 APH1AQ96BI3 265 aa8.6□□□□□ -1.03
LRRC28-216ENST00000559819 ZPBPQ9BS86 351 aa8.6□□□□□ -1.03
LRRC28-216ENST00000559819 CCL28Q9NRJ3 127 aa8.6□□□□□ -1.03
LRRC28-216ENST00000559819 UBE2J1Q9Y385 318 aaPredicted RBP8.6□□□□□ -1.03
LRRC28-216ENST00000559819 PRELID3BQ9Y3B1 194 aa8.6□□□□□ -1.03
LRRC28-216ENST00000559819 POMT1Q9Y6A1 747 aa8.6□□□□□ -1.03
LRRC28-216ENST00000559819 SLC22A20A6NK97 555 aa8.6□□□□□ -1.03
LRRC28-216ENST00000559819 TRAPPC2LH3BP13 241 aa8.6□□□□□ -1.03
LRRC28-216ENST00000559819 HS3ST1O14792 307 aa8.6□□□□□ -1.03
LRRC28-216ENST00000559819 TSPAN15O95858 294 aa8.6□□□□□ -1.03
LRRC28-216ENST00000559819 NAPSAO96009 420 aa8.6□□□□□ -1.03
LRRC28-216ENST00000559819 WNT5AP41221 380 aa8.6□□□□□ -1.03
LRRC28-216ENST00000559819 CAMLGP49069 296 aa8.6□□□□□ -1.03
LRRC28-216ENST00000559819 FLI1Q01543 452 aaPredicted RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms