RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 Q9N2K0 584 aa10.73□□□□□ -0.69
USP3-213ENST00000559711 DLL4Q9NR61 685 aa10.73□□□□□ -0.69
USP3-213ENST00000559711 TREM2Q9NZC2 230 aa10.73□□□□□ -0.69
USP3-213ENST00000559711 MGAT4CQ9UBM8 478 aa10.73□□□□□ -0.69
USP3-213ENST00000559711 HS3ST1O14792 307 aa10.73□□□□□ -0.69
USP3-213ENST00000559711 SH2D1BO14796 132 aa10.73□□□□□ -0.69
USP3-213ENST00000559711 OR2H2O95918 312 aa10.73□□□□□ -0.69
USP3-213ENST00000559711 ZNF44P15621 663 aa10.73□□□□□ -0.69
USP3-213ENST00000559711 ERP29P30040 261 aaKnown RBP10.73□□□□□ -0.69
USP3-213ENST00000559711 CFHR2P36980 270 aa10.73□□□□□ -0.69
USP3-213ENST00000559711 PRAMEF6Q5VXH4 476 aa10.73□□□□□ -0.69
USP3-213ENST00000559711 SHEQ5VZ18 495 aa10.73□□□□□ -0.69
USP3-213ENST00000559711 VHLLQ6RSH7 139 aa10.73□□□□□ -0.69
USP3-213ENST00000559711 SLC22A25Q6T423 547 aa10.73□□□□□ -0.69
USP3-213ENST00000559711 ZNF826PQ6ZT77 177 aa10.73□□□□□ -0.69
USP3-213ENST00000559711 NLRC3Q7RTR2 1065 aa10.73□□□□□ -0.69
USP3-213ENST00000559711 LYG2Q86SG7 212 aa10.73□□□□□ -0.69
USP3-213ENST00000559711 C12orf45Q8N5I9 185 aaPredicted RBP10.73□□□□□ -0.69
USP3-213ENST00000559711 ADAD2Q8NCV1 583 aaKnown RBP10.73□□□□□ -0.69
USP3-213ENST00000559711 MRPL24Q96A35 216 aaKnown RBP10.73□□□□□ -0.69
USP3-213ENST00000559711 ZNF486Q96H40 463 aaPredicted RBP10.73□□□□□ -0.69
USP3-213ENST00000559711 DHRS9Q9BPW9 319 aa10.73□□□□□ -0.69
USP3-213ENST00000559711 SYT3Q9BQG1 590 aa10.73□□□□□ -0.69
USP3-213ENST00000559711 ZNF2Q9BSG1 426 aaPredicted RBP10.73□□□□□ -0.69
USP3-213ENST00000559711 RTBDNQ9BSG5 229 aaPredicted RBP10.73□□□□□ -0.69
USP3-213ENST00000559711 MRPL37Q9BZE1 423 aaKnown RBP10.73□□□□□ -0.69
USP3-213ENST00000559711 WDR13Q9H1Z4 485 aa10.73□□□□□ -0.69
USP3-213ENST00000559711 CHMP1AQ9HD42 196 aaPredicted RBP10.73□□□□□ -0.69
USP3-213ENST00000559711 NGBQ9NPG2 151 aa10.73□□□□□ -0.69
USP3-213ENST00000559711 CA10Q9NS85 328 aa10.73□□□□□ -0.69
USP3-213ENST00000559711 PIPOXQ9P0Z9 390 aa10.73□□□□□ -0.69
USP3-213ENST00000559711 PLSCR5A0PG75 271 aa10.72□□□□□ -0.69
USP3-213ENST00000559711 C9orf170A2RU37 121 aa10.72□□□□□ -0.69
USP3-213ENST00000559711 A6NLC8 198 aa10.72□□□□□ -0.69
USP3-213ENST00000559711 SMLR1H3BR10 107 aa10.72□□□□□ -0.69
USP3-213ENST00000559711 SLC33A1O00400 549 aaPredicted RBP10.72□□□□□ -0.69
USP3-213ENST00000559711 ABCD4O14678 606 aa10.72□□□□□ -0.69
USP3-213ENST00000559711 GSTT2P0CG29 244 aa10.72□□□□□ -0.69
USP3-213ENST00000559711 LMO1P25800 156 aa10.72□□□□□ -0.69
USP3-213ENST00000559711 BSPH1Q075Z2 132 aa10.72□□□□□ -0.69
USP3-213ENST00000559711 PPP1R1AQ13522 171 aa10.72□□□□□ -0.69
USP3-213ENST00000559711 TMEM128Q5BJH2 165 aa10.72□□□□□ -0.69
USP3-213ENST00000559711 ZNF880Q6PDB4 577 aa10.72□□□□□ -0.69
USP3-213ENST00000559711 FIP1L1Q6UN15 594 aaKnown RBP10.72□□□□□ -0.69
USP3-213ENST00000559711 ACP7Q6ZNF0 438 aa10.72□□□□□ -0.69
USP3-213ENST00000559711 OR10Z1Q8NGY1 313 aa10.72□□□□□ -0.69
USP3-213ENST00000559711 LILRB4Q8NHJ6 448 aa10.72□□□□□ -0.69
USP3-213ENST00000559711 MRPL30Q8TCC3 161 aaKnown RBP10.72□□□□□ -0.69
USP3-213ENST00000559711 NEK7Q8TDX7 302 aa10.72□□□□□ -0.69
USP3-213ENST00000559711 RDH5Q92781 318 aa10.72□□□□□ -0.69
USP3-213ENST00000559711 LIME1Q9H400 295 aa10.72□□□□□ -0.69
USP3-213ENST00000559711 RANBP3Q9H6Z4 567 aaPredicted RBP10.72□□□□□ -0.69
USP3-213ENST00000559711 TAAR3PQ9P1P4 343 aa10.72□□□□□ -0.69
USP3-213ENST00000559711 CADP27708 2225 aa10.71□□□□□ -0.69
USP3-213ENST00000559711 HSPB6O14558 160 aa10.71□□□□□ -0.69
USP3-213ENST00000559711 HLA-AP01891 365 aaKnown RBP10.71□□□□□ -0.69
USP3-213ENST00000559711 GIPP09681 153 aaPredicted RBP10.71□□□□□ -0.69
USP3-213ENST00000559711 MDH2P40926 338 aaKnown RBP10.71□□□□□ -0.69
USP3-213ENST00000559711 IL13RA1P78552 427 aa10.71□□□□□ -0.69
USP3-213ENST00000559711 ADORA2A-AS1P86434 159 aa10.71□□□□□ -0.69
USP3-213ENST00000559711 C2orf68Q2NKX9 166 aa10.71□□□□□ -0.69
USP3-213ENST00000559711 GAPTQ8N292 157 aa10.71□□□□□ -0.69
USP3-213ENST00000559711 PRR7Q8TB68 274 aa10.71□□□□□ -0.69
USP3-213ENST00000559711 MITD1Q8WV92 249 aa10.71□□□□□ -0.69
USP3-213ENST00000559711 RNASE6Q93091 150 aaKnown RBP10.71□□□□□ -0.69
USP3-213ENST00000559711 TMEM230Q96A57 120 aa10.71□□□□□ -0.69
USP3-213ENST00000559711 ELMOD3Q96FG2 381 aa10.71□□□□□ -0.69
USP3-213ENST00000559711 MEGF10Q96KG7 1140 aa10.71□□□□□ -0.69
USP3-213ENST00000559711 HYLS1Q96M11 299 aa10.71□□□□□ -0.69
USP3-213ENST00000559711 UFSP2Q9NUQ7 469 aa10.71□□□□□ -0.69
USP3-213ENST00000559711 RASL12Q9NYN1 266 aa10.71□□□□□ -0.69
USP3-213ENST00000559711 GLS2Q9UI32 602 aa10.71□□□□□ -0.69
USP3-213ENST00000559711 ATP23Q9Y6H3 246 aa10.71□□□□□ -0.69
USP3-213ENST00000559711 KIR2DS1A0A191URI9 304 aa10.7□□□□□ -0.7
USP3-213ENST00000559711 TRDCB7Z8K6 153 aa10.7□□□□□ -0.7
USP3-213ENST00000559711 H7C1Q1 480 aa10.7□□□□□ -0.7
USP3-213ENST00000559711 WNT9BO14905 357 aa10.7□□□□□ -0.7
USP3-213ENST00000559711 DUS4LO95620 317 aaKnown RBP10.7□□□□□ -0.7
USP3-213ENST00000559711 HAND1O96004 215 aa10.7□□□□□ -0.7
USP3-213ENST00000559711 KNG1P01042 644 aa10.7□□□□□ -0.7
USP3-213ENST00000559711 AKR1C4P17516 323 aa10.7□□□□□ -0.7
USP3-213ENST00000559711 HLA-GP17693 338 aa10.7□□□□□ -0.7
USP3-213ENST00000559711 GLRA1P23415 457 aa10.7□□□□□ -0.7
USP3-213ENST00000559711 KIR2DS4P43632 304 aa10.7□□□□□ -0.7
USP3-213ENST00000559711 GATA4P43694 442 aa10.7□□□□□ -0.7
USP3-213ENST00000559711 RAP2BP61225 183 aa10.7□□□□□ -0.7
USP3-213ENST00000559711 KIR2DS1Q14954 304 aa10.7□□□□□ -0.7
USP3-213ENST00000559711 PAN3Q58A45 887 aaKnown RBP10.7□□□□□ -0.7
USP3-213ENST00000559711 C20orf204Q6ZNR8 217 aa10.7□□□□□ -0.7
USP3-213ENST00000559711 ASB13Q8WXK3 278 aa10.7□□□□□ -0.7
USP3-213ENST00000559711 SEBOXQ9HB31 216 aaPredicted RBP10.7□□□□□ -0.7
USP3-213ENST00000559711 TMEM165Q9HC07 324 aa10.7□□□□□ -0.7
USP3-213ENST00000559711 C1orf123Q9NWV4 160 aa10.7□□□□□ -0.7
USP3-213ENST00000559711 COQ3Q9NZJ6 369 aa10.7□□□□□ -0.7
USP3-213ENST00000559711 SHANK1Q9Y566 2161 aa10.7□□□□□ -0.7
USP3-213ENST00000559711 PKD1L2Q7Z442 2459 aa10.7□□□□□ -0.7
USP3-213ENST00000559711 IFNL4K9M1U5 179 aa10.69□□□□□ -0.7
USP3-213ENST00000559711 SIRPB1O00241 398 aa10.69□□□□□ -0.7
USP3-213ENST00000559711 ATXN7O15265 892 aaPredicted RBP10.69□□□□□ -0.7
USP3-213ENST00000559711 SLC22A5O76082 557 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms