RNA–Protein interactions for RNA: ENST00000559658.5

CHRNA3-206, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 1,889 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-206ENST00000559658 CLEC18CQ8NCF0 446 aa14.52□□□□□ -0.08
CHRNA3-206ENST00000559658 DEFB108BQ8NET1 73 aa14.52□□□□□ -0.08
CHRNA3-206ENST00000559658 PLPPR1Q8TBJ4 325 aa14.52□□□□□ -0.08
CHRNA3-206ENST00000559658 COX4I2Q96KJ9 171 aa14.52□□□□□ -0.08
CHRNA3-206ENST00000559658 CMSS1Q9BQ75 279 aaKnown RBP14.52□□□□□ -0.08
CHRNA3-206ENST00000559658 ST6GALNAC5Q9BVH7 336 aa14.52□□□□□ -0.08
CHRNA3-206ENST00000559658 IFT46Q9NQC8 304 aa14.52□□□□□ -0.08
CHRNA3-206ENST00000559658 CBLN4Q9NTU7 201 aa14.52□□□□□ -0.08
CHRNA3-206ENST00000559658 NLKQ9UBE8 527 aa14.52□□□□□ -0.08
CHRNA3-206ENST00000559658 USF3Q68DE3 2245 aa14.52□□□□□ -0.08
CHRNA3-206ENST00000559658 CSN2P05814 226 aa14.52□□□□□ -0.09
CHRNA3-206ENST00000559658 FCGR3AP08637 254 aa14.52□□□□□ -0.09
CHRNA3-206ENST00000559658 TNFRSF1AP19438 455 aa14.52□□□□□ -0.09
CHRNA3-206ENST00000559658 COL8A1P27658 744 aa14.52□□□□□ -0.09
CHRNA3-206ENST00000559658 ACTBP60709 375 aa14.52□□□□□ -0.09
CHRNA3-206ENST00000559658 ACTG1P63261 375 aa14.52□□□□□ -0.09
CHRNA3-206ENST00000559658 OR56B4Q8NH76 319 aa14.52□□□□□ -0.09
CHRNA3-206ENST00000559658 NEK7Q8TDX7 302 aa14.52□□□□□ -0.09
CHRNA3-206ENST00000559658 CCL17Q92583 94 aa14.52□□□□□ -0.09
CHRNA3-206ENST00000559658 TRAF4Q9BUZ4 470 aaPredicted RBP14.52□□□□□ -0.09
CHRNA3-206ENST00000559658 CACNG6Q9BXT2 260 aa14.52□□□□□ -0.09
CHRNA3-206ENST00000559658 IFT22Q9H7X7 185 aa14.52□□□□□ -0.09
CHRNA3-206ENST00000559658 WIPI2Q9Y4P8 454 aa14.52□□□□□ -0.09
CHRNA3-206ENST00000559658 CENPEQ02224 2701 aa14.51□□□□□ -0.09
CHRNA3-206ENST00000559658 TRAV39A0A0B4J263 110 aa14.51□□□□□ -0.09
CHRNA3-206ENST00000559658 TMEM82A0PJX8 343 aa14.51□□□□□ -0.09
CHRNA3-206ENST00000559658 OR2AT4A6NND4 320 aa14.51□□□□□ -0.09
CHRNA3-206ENST00000559658 KNG1P01042 644 aa14.51□□□□□ -0.09
CHRNA3-206ENST00000559658 CSF1P09603 554 aa14.51□□□□□ -0.09
CHRNA3-206ENST00000559658 CDKN1AP38936 164 aa14.51□□□□□ -0.09
CHRNA3-206ENST00000559658 PPOXP50336 477 aa14.51□□□□□ -0.09
CHRNA3-206ENST00000559658 COL10A1Q03692 680 aa14.51□□□□□ -0.09
CHRNA3-206ENST00000559658 PAN3Q58A45 887 aaKnown RBP14.51□□□□□ -0.09
CHRNA3-206ENST00000559658 CCBE1Q6UXH8 406 aaPredicted RBP14.51□□□□□ -0.09
CHRNA3-206ENST00000559658 DTX2Q86UW9 622 aa14.51□□□□□ -0.09
CHRNA3-206ENST00000559658 OCSTAMPQ9BR26 566 aa14.51□□□□□ -0.09
CHRNA3-206ENST00000559658 DNAJB11Q9UBS4 358 aa14.51□□□□□ -0.09
CHRNA3-206ENST00000559658 ZNF222Q9UK12 451 aa14.51□□□□□ -0.09
CHRNA3-206ENST00000559658 CELSR2Q9HCU4 2923 aa14.51□□□□□ -0.09
CHRNA3-206ENST00000559658 MEX3AA1L020 520 aaKnown RBP14.5□□□□□ -0.09
CHRNA3-206ENST00000559658 GIFP27352 417 aa14.5□□□□□ -0.09
CHRNA3-206ENST00000559658 RCVRNP35243 200 aa14.5□□□□□ -0.09
CHRNA3-206ENST00000559658 HRH1P35367 487 aa14.5□□□□□ -0.09
CHRNA3-206ENST00000559658 DYRK1AQ13627 763 aa14.5□□□□□ -0.09
CHRNA3-206ENST00000559658 MICBQ29980 383 aa14.5□□□□□ -0.09
CHRNA3-206ENST00000559658 STEAP1BQ6NZ63 245 aa14.5□□□□□ -0.09
CHRNA3-206ENST00000559658 Q6ZNX1 250 aa14.5□□□□□ -0.09
CHRNA3-206ENST00000559658 C17orf107Q6ZR85 190 aa14.5□□□□□ -0.09
CHRNA3-206ENST00000559658 UPRTQ96BW1 309 aa14.5□□□□□ -0.09
CHRNA3-206ENST00000559658 EGLN1Q9GZT9 426 aa14.5□□□□□ -0.09
CHRNA3-206ENST00000559658 MCUBQ9NWR8 336 aa14.5□□□□□ -0.09
CHRNA3-206ENST00000559658 NPTNQ9Y639 398 aa14.5□□□□□ -0.09
CHRNA3-206ENST00000559658 SH2D1BO14796 132 aa14.5□□□□□ -0.09
CHRNA3-206ENST00000559658 NDUFS7O75251 213 aa14.5□□□□□ -0.09
CHRNA3-206ENST00000559658 PMP2P02689 132 aa14.5□□□□□ -0.09
CHRNA3-206ENST00000559658 COL8A2P25067 703 aa14.5□□□□□ -0.09
CHRNA3-206ENST00000559658 SLC6A1P30531 599 aa14.5□□□□□ -0.09
CHRNA3-206ENST00000559658 AGAP6Q5VW22 663 aa14.5□□□□□ -0.09
CHRNA3-206ENST00000559658 HOGA1Q86XE5 327 aa14.5□□□□□ -0.09
CHRNA3-206ENST00000559658 FGFRL1Q8N441 504 aa14.5□□□□□ -0.09
CHRNA3-206ENST00000559658 TMEM229BQ8NBD8 167 aa14.5□□□□□ -0.09
CHRNA3-206ENST00000559658 SPOCK3Q9BQ16 436 aa14.5□□□□□ -0.09
CHRNA3-206ENST00000559658 C12orf4Q9NQ89 552 aa14.5□□□□□ -0.09
CHRNA3-206ENST00000559658 TMEM106BQ9NUM4 274 aa14.5□□□□□ -0.09
CHRNA3-206ENST00000559658 ETAA1Q9NY74 926 aa14.5□□□□□ -0.09
CHRNA3-206ENST00000559658 GCN1Q92616 2671 aaKnown RBP14.5□□□□□ -0.09
CHRNA3-206ENST00000559658 IGHV1-69-2A0A0G2JMI3 117 aa14.49□□□□□ -0.09
CHRNA3-206ENST00000559658 ZNF736B4DX44 427 aaPredicted RBP14.49□□□□□ -0.09
CHRNA3-206ENST00000559658 MCRIP1C9JLW8 97 aa14.49□□□□□ -0.09
CHRNA3-206ENST00000559658 TMEM178BH3BS89 294 aa14.49□□□□□ -0.09
CHRNA3-206ENST00000559658 CA11O75493 328 aa14.49□□□□□ -0.09
CHRNA3-206ENST00000559658 ECDO95905 644 aaPredicted RBP14.49□□□□□ -0.09
CHRNA3-206ENST00000559658 NAPSAO96009 420 aa14.49□□□□□ -0.09
CHRNA3-206ENST00000559658 GYPAP02724 150 aa14.49□□□□□ -0.09
CHRNA3-206ENST00000559658 CD74P04233 296 aa14.49□□□□□ -0.09
CHRNA3-206ENST00000559658 PRDX2P32119 198 aa14.49□□□□□ -0.09
CHRNA3-206ENST00000559658 OR3A1P47881 315 aa14.49□□□□□ -0.09
CHRNA3-206ENST00000559658 SSBP1Q04837 148 aaKnown RBP14.49□□□□□ -0.09
CHRNA3-206ENST00000559658 PLA1AQ53H76 456 aa14.49□□□□□ -0.09
CHRNA3-206ENST00000559658 TPRX1Q8N7U7 411 aa14.49□□□□□ -0.09
CHRNA3-206ENST00000559658 BEST4Q8NFU0 473 aa14.49□□□□□ -0.09
CHRNA3-206ENST00000559658 OR11L1Q8NGX0 322 aa14.49□□□□□ -0.09
CHRNA3-206ENST00000559658 OR4K15Q8NH41 348 aa14.49□□□□□ -0.09
CHRNA3-206ENST00000559658 ANGPTL6Q8NI99 470 aa14.49□□□□□ -0.09
CHRNA3-206ENST00000559658 ENKURQ8TC29 256 aa14.49□□□□□ -0.09
CHRNA3-206ENST00000559658 MRPL30Q8TCC3 161 aaKnown RBP14.49□□□□□ -0.09
CHRNA3-206ENST00000559658 ERGIC1Q969X5 290 aa14.49□□□□□ -0.09
CHRNA3-206ENST00000559658 POM121Q96HA1 1249 aa14.49□□□□□ -0.09
CHRNA3-206ENST00000559658 J3QKU1 62 aa14.48□□□□□ -0.09
CHRNA3-206ENST00000559658 ZNF737O75373 536 aa14.48□□□□□ -0.09
CHRNA3-206ENST00000559658 ZNF735P0CB33 412 aa14.48□□□□□ -0.09
CHRNA3-206ENST00000559658 GSTT2BP0CG30 244 aa14.48□□□□□ -0.09
CHRNA3-206ENST00000559658 AKAIN1P0CW23 69 aa14.48□□□□□ -0.09
CHRNA3-206ENST00000559658 NAT1P18440 290 aa14.48□□□□□ -0.09
CHRNA3-206ENST00000559658 GABRA2P47869 451 aa14.48□□□□□ -0.09
CHRNA3-206ENST00000559658 TAS2R19P59542 299 aa14.48□□□□□ -0.09
CHRNA3-206ENST00000559658 STUMQ69YW2 141 aa14.48□□□□□ -0.09
CHRNA3-206ENST00000559658 FIP1L1Q6UN15 594 aaKnown RBP14.48□□□□□ -0.09
CHRNA3-206ENST00000559658 ASCC1Q8N9N2 400 aaKnown RBP14.48□□□□□ -0.09
CHRNA3-206ENST00000559658 ZNRF1Q8ND25 227 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms