RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 IGKV1-12A0A0C4DH73 117 aa10.4□□□□□ -0.74
TPM1-220ENST00000559556 ODAMA1E959 279 aa10.4□□□□□ -0.74
TPM1-220ENST00000559556 OOSP1A8MZH6 123 aa10.4□□□□□ -0.74
TPM1-220ENST00000559556 KDM4BO94953 1096 aa10.4□□□□□ -0.74
TPM1-220ENST00000559556 IGKV1D-12P01611 117 aa10.4□□□□□ -0.74
TPM1-220ENST00000559556 ISG15P05161 165 aa10.4□□□□□ -0.74
TPM1-220ENST00000559556 PTGFRP43088 359 aa10.4□□□□□ -0.74
TPM1-220ENST00000559556 ZNF85Q03923 595 aa10.4□□□□□ -0.74
TPM1-220ENST00000559556 TMED1Q13445 227 aa10.4□□□□□ -0.74
TPM1-220ENST00000559556 TP53I3Q53FA7 332 aa10.4□□□□□ -0.74
TPM1-220ENST00000559556 CCDC144NLQ6NUI1 221 aa10.4□□□□□ -0.74
TPM1-220ENST00000559556 RDH10Q8IZV5 341 aa10.4□□□□□ -0.74
TPM1-220ENST00000559556 OSR2Q8N2R0 312 aa10.4□□□□□ -0.74
TPM1-220ENST00000559556 OR2G2Q8NGZ5 317 aa10.4□□□□□ -0.74
TPM1-220ENST00000559556 COQ2Q96H96 371 aa10.4□□□□□ -0.74
TPM1-220ENST00000559556 MBOAT4Q96T53 435 aa10.4□□□□□ -0.74
TPM1-220ENST00000559556 CIB1Q99828 191 aa10.4□□□□□ -0.74
TPM1-220ENST00000559556 RHOFQ9HBH0 211 aa10.4□□□□□ -0.74
TPM1-220ENST00000559556 GSTK1Q9Y2Q3 226 aa10.4□□□□□ -0.74
TPM1-220ENST00000559556 MOB4Q9Y3A3 225 aa10.4□□□□□ -0.74
TPM1-220ENST00000559556 HSPE1-MOB4S4R3N1 261 aa10.4□□□□□ -0.74
TPM1-220ENST00000559556 TENM2Q9NT68 2774 aa10.4□□□□□ -0.74
TPM1-220ENST00000559556 PSMB11A5LHX3 300 aa10.39□□□□□ -0.75
TPM1-220ENST00000559556 SH2D7A6NKC9 451 aaPredicted RBP10.39□□□□□ -0.75
TPM1-220ENST00000559556 ZNF729A6NN14 1252 aaPredicted RBP10.39□□□□□ -0.75
TPM1-220ENST00000559556 E9PQ18 207 aa10.39□□□□□ -0.75
TPM1-220ENST00000559556 MT-ND2P03891 347 aa10.39□□□□□ -0.75
TPM1-220ENST00000559556 ZNF20P17024 532 aa10.39□□□□□ -0.75
TPM1-220ENST00000559556 HOXD3P31249 432 aaPredicted RBP10.39□□□□□ -0.75
TPM1-220ENST00000559556 MNDAP41218 407 aa10.39□□□□□ -0.75
TPM1-220ENST00000559556 KPNB1Q14974 876 aaKnown RBP10.39□□□□□ -0.75
TPM1-220ENST00000559556 Q6P435 159 aa10.39□□□□□ -0.75
TPM1-220ENST00000559556 FDX2Q6P4F2 183 aa10.39□□□□□ -0.75
TPM1-220ENST00000559556 ZDHHC13Q8IUH4 622 aa10.39□□□□□ -0.75
TPM1-220ENST00000559556 MRPL41Q8IXM3 137 aaKnown RBP10.39□□□□□ -0.75
TPM1-220ENST00000559556 SAXO1Q8IYX7 474 aa10.39□□□□□ -0.75
TPM1-220ENST00000559556 CHST4Q8NCG5 386 aa10.39□□□□□ -0.75
TPM1-220ENST00000559556 OR51D1Q8NGF3 324 aa10.39□□□□□ -0.75
TPM1-220ENST00000559556 OR4D6Q8NGJ1 314 aa10.39□□□□□ -0.75
TPM1-220ENST00000559556 OR8J1Q8NGP2 316 aa10.39□□□□□ -0.75
TPM1-220ENST00000559556 RFKQ969G6 155 aa10.39□□□□□ -0.75
TPM1-220ENST00000559556 RFT1Q96AA3 541 aa10.39□□□□□ -0.75
TPM1-220ENST00000559556 EME1Q96AY2 570 aa10.39□□□□□ -0.75
TPM1-220ENST00000559556 FGGYQ96C11 551 aa10.39□□□□□ -0.75
TPM1-220ENST00000559556 B9D2Q9BPU9 175 aa10.39□□□□□ -0.75
TPM1-220ENST00000559556 GABARAPL3Q9BY60 117 aa10.39□□□□□ -0.75
TPM1-220ENST00000559556 PCDHB16Q9NRJ7 776 aa10.39□□□□□ -0.75
TPM1-220ENST00000559556 CSMD3Q7Z407 3707 aa10.38□□□□□ -0.75
TPM1-220ENST00000559556 FAM90A18PA6NE21 464 aa10.38□□□□□ -0.75
TPM1-220ENST00000559556 FAM90A16PA6NEW6 464 aa10.38□□□□□ -0.75
TPM1-220ENST00000559556 FAM90A20PA6NIJ5 464 aa10.38□□□□□ -0.75
TPM1-220ENST00000559556 FAM90A9PA6NNJ1 464 aa10.38□□□□□ -0.75
TPM1-220ENST00000559556 FAM90A12PA8MX19 464 aa10.38□□□□□ -0.75
TPM1-220ENST00000559556 FAM90A5PA8MXJ8 464 aa10.38□□□□□ -0.75
TPM1-220ENST00000559556 SLC33A1O00400 549 aaPredicted RBP10.38□□□□□ -0.75
TPM1-220ENST00000559556 TOR1AO14656 332 aa10.38□□□□□ -0.75
TPM1-220ENST00000559556 FAM90A15PP0C7V4 464 aa10.38□□□□□ -0.75
TPM1-220ENST00000559556 FAM90A13PP0C7W8 464 aa10.38□□□□□ -0.75
TPM1-220ENST00000559556 FAM90A14PP0C7W9 464 aa10.38□□□□□ -0.75
TPM1-220ENST00000559556 FAM90A24PP0C7X0 464 aa10.38□□□□□ -0.75
TPM1-220ENST00000559556 PRRX1P54821 245 aa10.38□□□□□ -0.75
TPM1-220ENST00000559556 NANOS3P60323 173 aaKnown RBP10.38□□□□□ -0.75
TPM1-220ENST00000559556 RPL23AP62750 156 aaKnown RBP10.38□□□□□ -0.75
TPM1-220ENST00000559556 CD69Q07108 199 aa10.38□□□□□ -0.75
TPM1-220ENST00000559556 ATXN7L3Q14CW9 347 aaPredicted RBP10.38□□□□□ -0.75
TPM1-220ENST00000559556 C17orf58Q2M2W7 97 aa10.38□□□□□ -0.75
TPM1-220ENST00000559556 DEFB121Q5J5C9 76 aa10.38□□□□□ -0.75
TPM1-220ENST00000559556 C9orf152Q5JTZ5 239 aa10.38□□□□□ -0.75
TPM1-220ENST00000559556 KRBOX4Q5JUW0 171 aa10.38□□□□□ -0.75
TPM1-220ENST00000559556 UTF1Q5T230 341 aa10.38□□□□□ -0.75
TPM1-220ENST00000559556 RNF144BQ7Z419 303 aa10.38□□□□□ -0.75
TPM1-220ENST00000559556 THNSL2Q86YJ6 484 aa10.38□□□□□ -0.75
TPM1-220ENST00000559556 DPF1Q92782 380 aa10.38□□□□□ -0.75
TPM1-220ENST00000559556 KIRREL1Q96J84 757 aa10.38□□□□□ -0.75
TPM1-220ENST00000559556 SPACA5Q96QH8 159 aa10.38□□□□□ -0.75
TPM1-220ENST00000559556 PPIL3Q9H2H8 161 aaKnown RBP10.38□□□□□ -0.75
TPM1-220ENST00000559556 FRRS1LQ9P0K9 344 aa10.38□□□□□ -0.75
TPM1-220ENST00000559556 FAM106CPP0CH98 169 aa10.37□□□□□ -0.75
TPM1-220ENST00000559556 ZNF44P15621 663 aa10.37□□□□□ -0.75
TPM1-220ENST00000559556 FASP25445 335 aa10.37□□□□□ -0.75
TPM1-220ENST00000559556 SLC6A1P30531 599 aa10.37□□□□□ -0.75
TPM1-220ENST00000559556 ATP6V1E1P36543 226 aa10.37□□□□□ -0.75
TPM1-220ENST00000559556 POLR2IP36954 125 aaKnown RBP10.37□□□□□ -0.75
TPM1-220ENST00000559556 OR3A4PP47883 348 aa10.37□□□□□ -0.75
TPM1-220ENST00000559556 THBS3P49746 956 aa10.37□□□□□ -0.75
TPM1-220ENST00000559556 CCR9P51686 369 aa10.37□□□□□ -0.75
TPM1-220ENST00000559556 DCTN2Q13561 401 aaKnown RBP10.37□□□□□ -0.75
TPM1-220ENST00000559556 RBM39Q14498 530 aaKnown RBP10.37□□□□□ -0.75
TPM1-220ENST00000559556 CDK5R1Q15078 307 aa10.37□□□□□ -0.75
TPM1-220ENST00000559556 KCTD20Q7Z5Y7 419 aa10.37□□□□□ -0.75
TPM1-220ENST00000559556 OR51A4Q8NGJ6 313 aa10.37□□□□□ -0.75
TPM1-220ENST00000559556 OR51T1Q8NGJ9 327 aa10.37□□□□□ -0.75
TPM1-220ENST00000559556 OR5D18Q8NGL1 313 aa10.37□□□□□ -0.75
TPM1-220ENST00000559556 OR13C9Q8NGT0 318 aa10.37□□□□□ -0.75
TPM1-220ENST00000559556 OR10AC1Q8NH08 325 aa10.37□□□□□ -0.75
TPM1-220ENST00000559556 OR9G1Q8NH87 305 aa10.37□□□□□ -0.75
TPM1-220ENST00000559556 CHPT1Q8WUD6 406 aa10.37□□□□□ -0.75
TPM1-220ENST00000559556 TOMM40LQ969M1 308 aa10.37□□□□□ -0.75
TPM1-220ENST00000559556 WWC2-AS2Q96NR7 200 aa10.37□□□□□ -0.75
TPM1-220ENST00000559556 ZNF649Q9BS31 505 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms