RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 PYCR1P32322 319 aa2.42□□□□□ -2.02
CASC4-206ENST00000558847 C1QTNF8P60827 252 aa2.42□□□□□ -2.02
CASC4-206ENST00000558847 RPS11P62280 158 aaKnown RBP eCLIP2.42□□□□□ -2.02
CASC4-206ENST00000558847 PRKCDQ05655 676 aa2.42□□□□□ -2.02
CASC4-206ENST00000558847 TPBGQ13641 420 aa2.42□□□□□ -2.02
CASC4-206ENST00000558847 FAM162BQ5T6X4 162 aa2.42□□□□□ -2.02
CASC4-206ENST00000558847 ERICH5Q6P6B1 374 aa2.42□□□□□ -2.02
CASC4-206ENST00000558847 PAGE2Q7Z2X7 111 aa2.42□□□□□ -2.02
CASC4-206ENST00000558847 COMTD1Q86VU5 262 aa2.42□□□□□ -2.02
CASC4-206ENST00000558847 RPRMLQ8N4K4 120 aa2.42□□□□□ -2.02
CASC4-206ENST00000558847 C1orf64Q8NEQ6 169 aa2.42□□□□□ -2.02
CASC4-206ENST00000558847 OR2AE1Q8NHA4 323 aa2.42□□□□□ -2.02
CASC4-206ENST00000558847 C2orf15Q8WU43 125 aaKnown RBP2.42□□□□□ -2.02
CASC4-206ENST00000558847 OR5P2Q8WZ92 322 aa2.42□□□□□ -2.02
CASC4-206ENST00000558847 CCDC127Q96BQ5 260 aa2.42□□□□□ -2.02
CASC4-206ENST00000558847 MRAP2Q96G30 205 aa2.42□□□□□ -2.02
CASC4-206ENST00000558847 OLFM3Q96PB7 478 aa2.42□□□□□ -2.02
CASC4-206ENST00000558847 DHCR7Q9UBM7 475 aaKnown RBP2.42□□□□□ -2.02
CASC4-206ENST00000558847 ENPP5Q9UJA9 477 aa2.42□□□□□ -2.02
CASC4-206ENST00000558847 COL27A1Q8IZC6 1860 aaPredicted RBP2.41□□□□□ -2.02
CASC4-206ENST00000558847 COL1A2P08123 1366 aa2.41□□□□□ -2.02
CASC4-206ENST00000558847 LRPPRCP42704 1394 aaKnown RBP2.41□□□□□ -2.02
CASC4-206ENST00000558847 KIAA0232Q92628 1395 aa2.41□□□□□ -2.02
CASC4-206ENST00000558847 BAZ2AQ9UIF9 1905 aaKnown RBP2.41□□□□□ -2.02
CASC4-206ENST00000558847 IGHV3-21A0A0B4J1V1 117 aa2.41□□□□□ -2.02
CASC4-206ENST00000558847 SULT1C2O00338 296 aa2.41□□□□□ -2.02
CASC4-206ENST00000558847 CYTH3O43739 400 aa2.41□□□□□ -2.02
CASC4-206ENST00000558847 UGT2B11O75310 529 aa2.41□□□□□ -2.02
CASC4-206ENST00000558847 PDCD6O75340 191 aa2.41□□□□□ -2.02
CASC4-206ENST00000558847 YEATS4O95619 227 aa2.41□□□□□ -2.02
CASC4-206ENST00000558847 FSTL3O95633 263 aa2.41□□□□□ -2.02
CASC4-206ENST00000558847 HLA-AP01891 365 aaKnown RBP2.41□□□□□ -2.02
CASC4-206ENST00000558847 SYT1P21579 422 aa2.41□□□□□ -2.02
CASC4-206ENST00000558847 AQP5P55064 265 aa2.41□□□□□ -2.02
CASC4-206ENST00000558847 OR2B6P58173 313 aa2.41□□□□□ -2.02
CASC4-206ENST00000558847 PRDX1Q06830 199 aaKnown RBP2.41□□□□□ -2.02
CASC4-206ENST00000558847 NXNL2Q5VZ03 156 aa2.41□□□□□ -2.02
CASC4-206ENST00000558847 ZNF470Q6ECI4 717 aa2.41□□□□□ -2.02
CASC4-206ENST00000558847 DGAT2L6Q6ZPD8 337 aa2.41□□□□□ -2.02
CASC4-206ENST00000558847 TMEM144Q7Z5S9 345 aa2.41□□□□□ -2.02
CASC4-206ENST00000558847 DPPA2Q7Z7J5 298 aa2.41□□□□□ -2.02
CASC4-206ENST00000558847 CALHM3Q86XJ0 350 aa2.41□□□□□ -2.02
CASC4-206ENST00000558847 TMEM25Q86YD3 366 aa2.41□□□□□ -2.02
CASC4-206ENST00000558847 AMN1Q8IY45 258 aa2.41□□□□□ -2.02
CASC4-206ENST00000558847 CPNE9Q8IYJ1 553 aa2.41□□□□□ -2.02
CASC4-206ENST00000558847 SLC25A45Q8N413 288 aa2.41□□□□□ -2.02
CASC4-206ENST00000558847 C3orf22Q8N5N4 141 aa2.41□□□□□ -2.02
CASC4-206ENST00000558847 ZFP62Q8NB50 900 aaPredicted RBP2.41□□□□□ -2.02
CASC4-206ENST00000558847 OR1P1Q8NH06 330 aa2.41□□□□□ -2.02
CASC4-206ENST00000558847 OR5AK3PQ8NH89 298 aa2.41□□□□□ -2.02
CASC4-206ENST00000558847 PDCD6IPQ8WUM4 868 aaKnown RBP2.41□□□□□ -2.02
CASC4-206ENST00000558847 DDIT4LQ96D03 193 aa2.41□□□□□ -2.02
CASC4-206ENST00000558847 PYURFQ96I23 114 aa2.41□□□□□ -2.02
CASC4-206ENST00000558847 FAAP24Q9BTP7 215 aa2.41□□□□□ -2.02
CASC4-206ENST00000558847 TRIM45Q9H8W5 580 aaPredicted RBP2.41□□□□□ -2.02
CASC4-206ENST00000558847 SPACA1Q9HBV2 294 aa2.41□□□□□ -2.02
CASC4-206ENST00000558847 KIF26AQ9ULI4 1882 aaPredicted RBP2.41□□□□□ -2.02
CASC4-206ENST00000558847 RPRD2Q5VT52 1461 aaKnown RBP2.4□□□□□ -2.02
CASC4-206ENST00000558847 POLR3AO14802 1390 aaPredicted RBP2.4□□□□□ -2.02
CASC4-206ENST00000558847 IGHV2-26A0A0B4J1V2 119 aa2.4□□□□□ -2.03
CASC4-206ENST00000558847 IGHV3-43A0A0B4J1X8 118 aa2.4□□□□□ -2.03
CASC4-206ENST00000558847 TMEM213A2RRL7 107 aa2.4□□□□□ -2.03
CASC4-206ENST00000558847 FAM183AA6NL82 134 aa2.4□□□□□ -2.03
CASC4-206ENST00000558847 D6RAR5 112 aa2.4□□□□□ -2.03
CASC4-206ENST00000558847 H3BP45 60 aa2.4□□□□□ -2.03
CASC4-206ENST00000558847 M0QXV9 152 aa2.4□□□□□ -2.03
CASC4-206ENST00000558847 PHYHO14832 338 aa2.4□□□□□ -2.03
CASC4-206ENST00000558847 TCF21O43680 179 aa2.4□□□□□ -2.03
CASC4-206ENST00000558847 CA2P00918 260 aa2.4□□□□□ -2.03
CASC4-206ENST00000558847 GTF2F2P13984 249 aa2.4□□□□□ -2.03
CASC4-206ENST00000558847 KDELR2P33947 212 aa2.4□□□□□ -2.03
CASC4-206ENST00000558847 MAGEA6P43360 314 aa2.4□□□□□ -2.03
CASC4-206ENST00000558847 RHOAP61586 193 aa2.4□□□□□ -2.03
CASC4-206ENST00000558847 RAB31Q13636 194 aa2.4□□□□□ -2.03
CASC4-206ENST00000558847 ZBTB6Q15916 424 aa2.4□□□□□ -2.03
CASC4-206ENST00000558847 TMEM241Q24JQ0 296 aa2.4□□□□□ -2.03
CASC4-206ENST00000558847 PP632Q6XCG6 107 aa2.4□□□□□ -2.03
CASC4-206ENST00000558847 USP50Q70EL3 339 aaPredicted RBP2.4□□□□□ -2.03
CASC4-206ENST00000558847 CRLF3Q8IUI8 442 aa2.4□□□□□ -2.03
CASC4-206ENST00000558847 ATP6V1C2Q8NEY4 427 aa2.4□□□□□ -2.03
CASC4-206ENST00000558847 OR8S1Q8NH09 359 aa2.4□□□□□ -2.03
CASC4-206ENST00000558847 CLDN23Q96B33 292 aa2.4□□□□□ -2.03
CASC4-206ENST00000558847 NDEL1Q9GZM8 345 aa2.4□□□□□ -2.03
CASC4-206ENST00000558847 MFSD1Q9H3U5 465 aa2.4□□□□□ -2.03
CASC4-206ENST00000558847 POMKQ9H5K3 350 aa2.4□□□□□ -2.03
CASC4-206ENST00000558847 RBM12B-AS1Q9P1G2 102 aa2.4□□□□□ -2.03
CASC4-206ENST00000558847 AK9Q5TCS8 1911 aa2.4□□□□□ -2.03
CASC4-206ENST00000558847 TRPC5OSA6NMA1 111 aa2.39□□□□□ -2.03
CASC4-206ENST00000558847 F5H5P2 479 aa2.39□□□□□ -2.03
CASC4-206ENST00000558847 K7EM74 188 aa2.39□□□□□ -2.03
CASC4-206ENST00000558847 LIN7AO14910 233 aaPredicted RBP2.39□□□□□ -2.03
CASC4-206ENST00000558847 IGHG2P01859 326 aa2.39□□□□□ -2.03
CASC4-206ENST00000558847 CNTFRP26992 372 aa2.39□□□□□ -2.03
CASC4-206ENST00000558847 DMTNQ08495 405 aa2.39□□□□□ -2.03
CASC4-206ENST00000558847 IL15RAQ13261 267 aa2.39□□□□□ -2.03
CASC4-206ENST00000558847 FAM53BQ14153 422 aa2.39□□□□□ -2.03
CASC4-206ENST00000558847 EXOC3L4Q17RC7 722 aa2.39□□□□□ -2.03
CASC4-206ENST00000558847 OR10J3Q5JRS4 329 aa2.39□□□□□ -2.03
CASC4-206ENST00000558847 OLIG3Q7RTU3 272 aa2.39□□□□□ -2.03
CASC4-206ENST00000558847 OR2M3Q8NG83 312 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms