RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 MINOS1-NBL1R4GNA1 71 aa6.51□□□□□ -1.37
TRAF3-205ENST00000558700 TRGV10A0A0A0MS01 117 aa6.5□□□□□ -1.37
TRAF3-205ENST00000558700 IGHV2-26A0A0B4J1V2 119 aa6.5□□□□□ -1.37
TRAF3-205ENST00000558700 A0A0G2JK05 382 aa6.5□□□□□ -1.37
TRAF3-205ENST00000558700 MEX3AA1L020 520 aaKnown RBP6.5□□□□□ -1.37
TRAF3-205ENST00000558700 FUOMA2VDF0 154 aa6.5□□□□□ -1.37
TRAF3-205ENST00000558700 F8VVB4 439 aa6.5□□□□□ -1.37
TRAF3-205ENST00000558700 F8VWA3 439 aa6.5□□□□□ -1.37
TRAF3-205ENST00000558700 EI24O14681 340 aa6.5□□□□□ -1.37
TRAF3-205ENST00000558700 IGHA1P01876 353 aa6.5□□□□□ -1.37
TRAF3-205ENST00000558700 OPN1MWP04001 364 aa6.5□□□□□ -1.37
TRAF3-205ENST00000558700 ISG15P05161 165 aa6.5□□□□□ -1.37
TRAF3-205ENST00000558700 ALPLP05186 524 aa6.5□□□□□ -1.37
TRAF3-205ENST00000558700 RPSAP08865 295 aaKnown RBP6.5□□□□□ -1.37
TRAF3-205ENST00000558700 OPN1MW2P0DN77 364 aa6.5□□□□□ -1.37
TRAF3-205ENST00000558700 OPN1MW3P0DN78 364 aa6.5□□□□□ -1.37
TRAF3-205ENST00000558700 VSIG10L2P0DP72 767 aa6.5□□□□□ -1.37
TRAF3-205ENST00000558700 ATF1P18846 271 aa6.5□□□□□ -1.37
TRAF3-205ENST00000558700 BCL3P20749 454 aa6.5□□□□□ -1.37
TRAF3-205ENST00000558700 CCR9P51686 369 aa6.5□□□□□ -1.37
TRAF3-205ENST00000558700 DYNLT3P51808 116 aa6.5□□□□□ -1.37
TRAF3-205ENST00000558700 ARHGDIBP52566 201 aa6.5□□□□□ -1.37
TRAF3-205ENST00000558700 SNU13P55769 128 aaKnown RBP6.5□□□□□ -1.37
TRAF3-205ENST00000558700 MTCP1P56278 107 aa6.5□□□□□ -1.37
TRAF3-205ENST00000558700 P2RX3P56373 397 aa6.5□□□□□ -1.37
TRAF3-205ENST00000558700 SNRPGP62308 76 aaKnown RBP6.5□□□□□ -1.37
TRAF3-205ENST00000558700 IL18R1Q13478 541 aa6.5□□□□□ -1.37
TRAF3-205ENST00000558700 ZNF146Q15072 292 aa6.5□□□□□ -1.37
TRAF3-205ENST00000558700 SSX2Q16385 188 aa6.5□□□□□ -1.37
TRAF3-205ENST00000558700 SLC25A30Q5SVS4 291 aa6.5□□□□□ -1.37
TRAF3-205ENST00000558700 OR52W1Q6IF63 320 aa6.5□□□□□ -1.37
TRAF3-205ENST00000558700 ZFP1Q6P2D0 407 aa6.5□□□□□ -1.37
TRAF3-205ENST00000558700 TMEM219Q86XT9 240 aa6.5□□□□□ -1.37
TRAF3-205ENST00000558700 C1QL4Q86Z23 238 aa6.5□□□□□ -1.37
TRAF3-205ENST00000558700 DYNAPQ8N1N2 210 aa6.5□□□□□ -1.37
TRAF3-205ENST00000558700 Q8N2B8 174 aa6.5□□□□□ -1.37
TRAF3-205ENST00000558700 C11orf44Q8N8P7 122 aa6.5□□□□□ -1.37
TRAF3-205ENST00000558700 OR4S1Q8NGB4 309 aa6.5□□□□□ -1.37
TRAF3-205ENST00000558700 OR13C3Q8NGS6 347 aa6.5□□□□□ -1.37
TRAF3-205ENST00000558700 OR13C9Q8NGT0 318 aa6.5□□□□□ -1.37
TRAF3-205ENST00000558700 PIFOQ8TCI5 191 aa6.5□□□□□ -1.37
TRAF3-205ENST00000558700 CPNE2Q96FN4 548 aaPredicted RBP6.5□□□□□ -1.37
TRAF3-205ENST00000558700 C4orf36Q96KX1 117 aa6.5□□□□□ -1.37
TRAF3-205ENST00000558700 MBOAT4Q96T53 435 aa6.5□□□□□ -1.37
TRAF3-205ENST00000558700 PRSS22Q9GZN4 317 aa6.5□□□□□ -1.37
TRAF3-205ENST00000558700 CHST6Q9GZX3 395 aa6.5□□□□□ -1.37
TRAF3-205ENST00000558700 TMEM133Q9H2Q1 129 aa6.5□□□□□ -1.37
TRAF3-205ENST00000558700 RHOFQ9HBH0 211 aa6.5□□□□□ -1.37
TRAF3-205ENST00000558700 HMG20AQ9NP66 347 aa6.5□□□□□ -1.37
TRAF3-205ENST00000558700 IL36RNQ9UBH0 155 aa6.5□□□□□ -1.37
TRAF3-205ENST00000558700 FOXJ3Q9UPW0 622 aa6.5□□□□□ -1.37
TRAF3-205ENST00000558700 UBE2J1Q9Y385 318 aaPredicted RBP6.5□□□□□ -1.37
TRAF3-205ENST00000558700 IGKV1-9A0A0C4DH69 117 aa6.49□□□□□ -1.37
TRAF3-205ENST00000558700 A6NDX4 124 aa6.49□□□□□ -1.37
TRAF3-205ENST00000558700 SIRPB1O00241 398 aa6.49□□□□□ -1.37
TRAF3-205ENST00000558700 SH2D1BO14796 132 aa6.49□□□□□ -1.37
TRAF3-205ENST00000558700 KDM4BO94953 1096 aa6.49□□□□□ -1.37
TRAF3-205ENST00000558700 MT-ND2P03891 347 aa6.49□□□□□ -1.37
TRAF3-205ENST00000558700 CSN2P05814 226 aa6.49□□□□□ -1.37
TRAF3-205ENST00000558700 ZNF44P15621 663 aa6.49□□□□□ -1.37
TRAF3-205ENST00000558700 HTR1DP28221 377 aa6.49□□□□□ -1.37
TRAF3-205ENST00000558700 ERP29P30040 261 aaKnown RBP6.49□□□□□ -1.37
TRAF3-205ENST00000558700 OR3A1P47881 315 aa6.49□□□□□ -1.37
TRAF3-205ENST00000558700 NPBWR2P48146 333 aa6.49□□□□□ -1.37
TRAF3-205ENST00000558700 ALDH3A2P51648 485 aa6.49□□□□□ -1.37
TRAF3-205ENST00000558700 NANOS3P60323 173 aaKnown RBP6.49□□□□□ -1.37
TRAF3-205ENST00000558700 CD83Q01151 205 aa6.49□□□□□ -1.37
TRAF3-205ENST00000558700 SLC34A1Q06495 639 aa6.49□□□□□ -1.37
TRAF3-205ENST00000558700 MRPL28Q13084 256 aaKnown RBP6.49□□□□□ -1.37
TRAF3-205ENST00000558700 PDZK1IP1Q13113 114 aa6.49□□□□□ -1.37
TRAF3-205ENST00000558700 NDUFA11Q86Y39 141 aa6.49□□□□□ -1.37
TRAF3-205ENST00000558700 SAXO1Q8IYX7 474 aa6.49□□□□□ -1.37
TRAF3-205ENST00000558700 RDH10Q8IZV5 341 aa6.49□□□□□ -1.37
TRAF3-205ENST00000558700 ACBD7Q8N6N7 88 aa6.49□□□□□ -1.37
TRAF3-205ENST00000558700 TPRX1Q8N7U7 411 aa6.49□□□□□ -1.37
TRAF3-205ENST00000558700 CHST4Q8NCG5 386 aa6.49□□□□□ -1.37
TRAF3-205ENST00000558700 ZNF596Q8TC21 504 aa6.49□□□□□ -1.37
TRAF3-205ENST00000558700 HAVCR2Q8TDQ0 301 aa6.49□□□□□ -1.37
TRAF3-205ENST00000558700 CAPSLQ8WWF8 208 aa6.49□□□□□ -1.37
TRAF3-205ENST00000558700 PYDC1Q8WXC3 89 aa6.49□□□□□ -1.37
TRAF3-205ENST00000558700 RFT1Q96AA3 541 aa6.49□□□□□ -1.37
TRAF3-205ENST00000558700 FGGYQ96C11 551 aa6.49□□□□□ -1.37
TRAF3-205ENST00000558700 PELI1Q96FA3 418 aa6.49□□□□□ -1.37
TRAF3-205ENST00000558700 AKR1E2Q96JD6 320 aa6.49□□□□□ -1.37
TRAF3-205ENST00000558700 COMMD4Q9H0A8 199 aa6.49□□□□□ -1.37
TRAF3-205ENST00000558700 GSTK1Q9Y2Q3 226 aa6.49□□□□□ -1.37
TRAF3-205ENST00000558700 TGP01266 2768 aa6.49□□□□□ -1.37
TRAF3-205ENST00000558700 TMEM212A6NML5 194 aa6.48□□□□□ -1.37
TRAF3-205ENST00000558700 OR4C45A6NMZ5 311 aa6.48□□□□□ -1.37
TRAF3-205ENST00000558700 J3QLW9 94 aa6.48□□□□□ -1.37
TRAF3-205ENST00000558700 J3QRE1 110 aa6.48□□□□□ -1.37
TRAF3-205ENST00000558700 PLXNB1O43157 2135 aa6.48□□□□□ -1.37
TRAF3-205ENST00000558700 SULT1B1O43704 296 aa6.48□□□□□ -1.37
TRAF3-205ENST00000558700 XPNPEP2O43895 674 aa6.48□□□□□ -1.37
TRAF3-205ENST00000558700 MPZL2O60487 215 aa6.48□□□□□ -1.37
TRAF3-205ENST00000558700 OR2H2O95918 312 aa6.48□□□□□ -1.37
TRAF3-205ENST00000558700 HCKP08631 526 aa6.48□□□□□ -1.37
TRAF3-205ENST00000558700 CCDC159P0C7I6 412 aa6.48□□□□□ -1.37
TRAF3-205ENST00000558700 DBTP11182 482 aaKnown RBP6.48□□□□□ -1.37
TRAF3-205ENST00000558700 ZNF19P17023 458 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms