RNA–Protein interactions for RNA: ENST00000558649.5

RABGGTA-206, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-206ENST00000558649 DUX5Q96PT3 197 aa13□□□□□ -0.33
RABGGTA-206ENST00000558649 SLITRK2Q9H156 845 aa13□□□□□ -0.33
RABGGTA-206ENST00000558649 SEBOXQ9HB31 216 aaPredicted RBP13□□□□□ -0.33
RABGGTA-206ENST00000558649 IL36GQ9NZH8 169 aa13□□□□□ -0.33
RABGGTA-206ENST00000558649 ZNF581Q9P0T4 197 aa13□□□□□ -0.33
RABGGTA-206ENST00000558649 LRRC42Q9Y546 428 aa13□□□□□ -0.33
RABGGTA-206ENST00000558649 hADV38S2A0JD32 116 aa12.99□□□□□ -0.33
RABGGTA-206ENST00000558649 CRTAPO75718 401 aaPredicted RBP12.99□□□□□ -0.33
RABGGTA-206ENST00000558649 OR7C1O76099 320 aaPredicted RBP12.99□□□□□ -0.33
RABGGTA-206ENST00000558649 CALRP27797 417 aaKnown RBP12.99□□□□□ -0.33
RABGGTA-206ENST00000558649 P2RX3P56373 397 aa12.99□□□□□ -0.33
RABGGTA-206ENST00000558649 BAMBIQ13145 260 aa12.99□□□□□ -0.33
RABGGTA-206ENST00000558649 IL13RA2Q14627 380 aa12.99□□□□□ -0.33
RABGGTA-206ENST00000558649 DEFB112Q30KQ8 113 aa12.99□□□□□ -0.33
RABGGTA-206ENST00000558649 KRTAP24-1Q3LI83 254 aa12.99□□□□□ -0.33
RABGGTA-206ENST00000558649 UBE2UQ5VVX9 321 aa12.99□□□□□ -0.33
RABGGTA-206ENST00000558649 GLT8D1Q68CQ7 371 aa12.99□□□□□ -0.33
RABGGTA-206ENST00000558649 ZNF773Q6PK81 442 aa12.99□□□□□ -0.33
RABGGTA-206ENST00000558649 C9orf139Q6ZV77 190 aa12.99□□□□□ -0.33
RABGGTA-206ENST00000558649 USP43Q70EL4 1123 aa12.99□□□□□ -0.33
RABGGTA-206ENST00000558649 TCF23Q7RTU1 214 aa12.99□□□□□ -0.33
RABGGTA-206ENST00000558649 CHST4Q8NCG5 386 aa12.99□□□□□ -0.33
RABGGTA-206ENST00000558649 TMEM158Q8WZ71 300 aa12.99□□□□□ -0.33
RABGGTA-206ENST00000558649 PHYHIPQ92561 330 aa12.99□□□□□ -0.33
RABGGTA-206ENST00000558649 ZDHHC16Q969W1 377 aa12.99□□□□□ -0.33
RABGGTA-206ENST00000558649 JMJD8Q96S16 334 aa12.99□□□□□ -0.33
RABGGTA-206ENST00000558649 BANF2Q9H503 90 aa12.99□□□□□ -0.33
RABGGTA-206ENST00000558649 ESM1Q9NQ30 184 aa12.99□□□□□ -0.33
RABGGTA-206ENST00000558649 PCDHB16Q9NRJ7 776 aa12.99□□□□□ -0.33
RABGGTA-206ENST00000558649 NDUFB11Q9NX14 153 aa12.99□□□□□ -0.33
RABGGTA-206ENST00000558649 SF3B6Q9Y3B4 125 aaKnown RBP12.99□□□□□ -0.33
RABGGTA-206ENST00000558649 DSCAML1Q8TD84 2053 aa12.99□□□□□ -0.33
RABGGTA-206ENST00000558649 A0A0A6YYJ9 748 aa12.98□□□□□ -0.33
RABGGTA-206ENST00000558649 TRAV24A0A0B4J272 114 aa12.98□□□□□ -0.33
RABGGTA-206ENST00000558649 hCG_1809904A0A1W2PP81 198 aa12.98□□□□□ -0.33
RABGGTA-206ENST00000558649 A0A1W2PPE2 198 aa12.98□□□□□ -0.33
RABGGTA-206ENST00000558649 A0A1W2PR64 198 aa12.98□□□□□ -0.33
RABGGTA-206ENST00000558649 A0A1W2PRV1 198 aa12.98□□□□□ -0.33
RABGGTA-206ENST00000558649 MEGF11A6BM72 1044 aa12.98□□□□□ -0.33
RABGGTA-206ENST00000558649 GEMIN2O14893 280 aaKnown RBP12.98□□□□□ -0.33
RABGGTA-206ENST00000558649 ZNF780AO75290 641 aaPredicted RBP12.98□□□□□ -0.33
RABGGTA-206ENST00000558649 ARL6IP5O75915 188 aa12.98□□□□□ -0.33
RABGGTA-206ENST00000558649 ZNF728P0DKX0 622 aa12.98□□□□□ -0.33
RABGGTA-206ENST00000558649 GTF2F2P13984 249 aa12.98□□□□□ -0.33
RABGGTA-206ENST00000558649 PRTN3P24158 256 aa12.98□□□□□ -0.33
RABGGTA-206ENST00000558649 COX7A1P24310 79 aa12.98□□□□□ -0.33
RABGGTA-206ENST00000558649 LMO1P25800 156 aa12.98□□□□□ -0.33
RABGGTA-206ENST00000558649 GLIPR1P48060 266 aa12.98□□□□□ -0.33
RABGGTA-206ENST00000558649 GUCA2AQ02747 115 aa12.98□□□□□ -0.33
RABGGTA-206ENST00000558649 MEF2CQ06413 473 aaPredicted RBP12.98□□□□□ -0.33
RABGGTA-206ENST00000558649 GPR176Q14439 515 aa12.98□□□□□ -0.33
RABGGTA-206ENST00000558649 KRBOX4Q5JUW0 171 aa12.98□□□□□ -0.33
RABGGTA-206ENST00000558649 NCR3LG1Q68D85 454 aa12.98□□□□□ -0.33
RABGGTA-206ENST00000558649 C1orf122Q6ZSJ8 110 aa12.98□□□□□ -0.33
RABGGTA-206ENST00000558649 CDH26Q8IXH8 852 aa12.98□□□□□ -0.33
RABGGTA-206ENST00000558649 FCGR1BQ92637 280 aa12.98□□□□□ -0.33
RABGGTA-206ENST00000558649 TNFRSF14Q92956 283 aa12.98□□□□□ -0.33
RABGGTA-206ENST00000558649 FAM46BQ96A09 425 aa12.98□□□□□ -0.33
RABGGTA-206ENST00000558649 ZNF714Q96N38 554 aa12.98□□□□□ -0.33
RABGGTA-206ENST00000558649 UQCC2Q9BRT2 126 aa12.98□□□□□ -0.33
RABGGTA-206ENST00000558649 TNFRSF19Q9NS68 423 aa12.98□□□□□ -0.33
RABGGTA-206ENST00000558649 LINC00312Q9Y6C7 94 aa12.98□□□□□ -0.33
RABGGTA-206ENST00000558649 A0A0U1RQK1 487 aa12.97□□□□□ -0.33
RABGGTA-206ENST00000558649 DNAJC9-AS1A6NH13 148 aa12.97□□□□□ -0.33
RABGGTA-206ENST00000558649 CCRL2O00421 344 aa12.97□□□□□ -0.33
RABGGTA-206ENST00000558649 NPFFO15130 113 aa12.97□□□□□ -0.33
RABGGTA-206ENST00000558649 DLX6P56179 175 aa12.97□□□□□ -0.33
RABGGTA-206ENST00000558649 BPIFB3P59826 476 aa12.97□□□□□ -0.33
RABGGTA-206ENST00000558649 NEDD8Q15843 81 aa12.97□□□□□ -0.33
RABGGTA-206ENST00000558649 TAF9Q16594 264 aa12.97□□□□□ -0.33
RABGGTA-206ENST00000558649 KCTD21Q4G0X4 260 aa12.97□□□□□ -0.33
RABGGTA-206ENST00000558649 ATAD3CQ5T2N8 411 aa12.97□□□□□ -0.33
RABGGTA-206ENST00000558649 PIP4P2Q8N4L2 257 aa12.97□□□□□ -0.33
RABGGTA-206ENST00000558649 SUMF2Q8NBJ7 301 aa12.97□□□□□ -0.33
RABGGTA-206ENST00000558649 Q8NFD4 153 aa12.97□□□□□ -0.33
RABGGTA-206ENST00000558649 NEK7Q8TDX7 302 aa12.97□□□□□ -0.33
RABGGTA-206ENST00000558649 COQ2Q96H96 371 aa12.97□□□□□ -0.33
RABGGTA-206ENST00000558649 SELENOIQ9C0D9 397 aa12.97□□□□□ -0.33
RABGGTA-206ENST00000558649 KCNK15Q9H427 330 aa12.97□□□□□ -0.33
RABGGTA-206ENST00000558649 AK6Q9Y3D8 172 aaKnown RBP12.97□□□□□ -0.33
RABGGTA-206ENST00000558649 TRGV10A0A0A0MS01 117 aa12.96□□□□□ -0.33
RABGGTA-206ENST00000558649 MEIOCA2RUB1 952 aa12.96□□□□□ -0.33
RABGGTA-206ENST00000558649 FUOMA2VDF0 154 aa12.96□□□□□ -0.33
RABGGTA-206ENST00000558649 TRIM77I1YAP6 450 aa12.96□□□□□ -0.33
RABGGTA-206ENST00000558649 MGMTP16455 207 aa12.96□□□□□ -0.33
RABGGTA-206ENST00000558649 ERP29P30040 261 aaKnown RBP12.96□□□□□ -0.33
RABGGTA-206ENST00000558649 SAA4P35542 130 aa12.96□□□□□ -0.33
RABGGTA-206ENST00000558649 BRICD5Q6PL45 260 aa12.96□□□□□ -0.33
RABGGTA-206ENST00000558649 LYPD6Q86Y78 171 aa12.96□□□□□ -0.33
RABGGTA-206ENST00000558649 C11orf42Q8N5U0 333 aa12.96□□□□□ -0.33
RABGGTA-206ENST00000558649 ZDHHC22Q8N966 263 aa12.96□□□□□ -0.33
RABGGTA-206ENST00000558649 TMEM104Q8NE00 496 aa12.96□□□□□ -0.33
RABGGTA-206ENST00000558649 FOXRED1Q96CU9 486 aaPredicted RBP12.96□□□□□ -0.33
RABGGTA-206ENST00000558649 C1orf147Q96MC9 270 aaPredicted RBP12.96□□□□□ -0.33
RABGGTA-206ENST00000558649 DPCDQ9BVM2 203 aaPredicted RBP12.96□□□□□ -0.33
RABGGTA-206ENST00000558649 C19orf24Q9BVV8 132 aa12.96□□□□□ -0.33
RABGGTA-206ENST00000558649 UNKLQ9H9P5 680 aaKnown RBP12.96□□□□□ -0.33
RABGGTA-206ENST00000558649 PLGRKTQ9HBL7 147 aa12.96□□□□□ -0.33
RABGGTA-206ENST00000558649 FAM96BQ9Y3D0 163 aa12.96□□□□□ -0.33
RABGGTA-206ENST00000558649 ODAMA1E959 279 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms