RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 ANKRD30BLA7E2S9 258 aa3.46□□□□□ -1.86
SPG11-211ENST00000558561 RNF212BA8MTL3 300 aa3.46□□□□□ -1.86
SPG11-211ENST00000558561 ZNF670-ZNF695F2Z2N8 137 aa3.46□□□□□ -1.86
SPG11-211ENST00000558561 LOC110117498-PIK3R3F6TDL0 507 aa3.46□□□□□ -1.86
SPG11-211ENST00000558561 DVL1O14640 695 aa3.46□□□□□ -1.86
SPG11-211ENST00000558561 SPRY1O43609 319 aaPredicted RBP3.46□□□□□ -1.86
SPG11-211ENST00000558561 XPNPEP2O43895 674 aa3.46□□□□□ -1.86
SPG11-211ENST00000558561 NRASP01111 189 aa3.46□□□□□ -1.86
SPG11-211ENST00000558561 IGKV1D-12P01611 117 aa3.46□□□□□ -1.86
SPG11-211ENST00000558561 OR2T7P0C7T2 308 aa3.46□□□□□ -1.86
SPG11-211ENST00000558561 FAM90A13PP0C7W8 464 aa3.46□□□□□ -1.86
SPG11-211ENST00000558561 FAM90A24PP0C7X0 464 aa3.46□□□□□ -1.86
SPG11-211ENST00000558561 DBTP11182 482 aaKnown RBP3.46□□□□□ -1.86
SPG11-211ENST00000558561 PSG2P11465 335 aa3.46□□□□□ -1.86
SPG11-211ENST00000558561 FCGR1AP12314 374 aa3.46□□□□□ -1.86
SPG11-211ENST00000558561 RPS2P15880 293 aaKnown RBP3.46□□□□□ -1.86
SPG11-211ENST00000558561 C21orf33P30042 268 aaPredicted RBP3.46□□□□□ -1.86
SPG11-211ENST00000558561 SRP14P37108 136 aaKnown RBP3.46□□□□□ -1.86
SPG11-211ENST00000558561 MDH2P40926 338 aaKnown RBP3.46□□□□□ -1.86
SPG11-211ENST00000558561 GABRA2P47869 451 aa3.46□□□□□ -1.86
SPG11-211ENST00000558561 AMTP48728 403 aa3.46□□□□□ -1.86
SPG11-211ENST00000558561 COMPP49747 757 aaPredicted RBP3.46□□□□□ -1.86
SPG11-211ENST00000558561 RIDAP52758 137 aaKnown RBP3.46□□□□□ -1.86
SPG11-211ENST00000558561 BLVRAP53004 296 aa3.46□□□□□ -1.86
SPG11-211ENST00000558561 SNU13P55769 128 aaKnown RBP3.46□□□□□ -1.86
SPG11-211ENST00000558561 FGF12P61328 243 aa3.46□□□□□ -1.86
SPG11-211ENST00000558561 KLRD1Q13241 179 aa3.46□□□□□ -1.86
SPG11-211ENST00000558561 ZSCAN26Q16670 478 aa3.46□□□□□ -1.86
SPG11-211ENST00000558561 ZNF181Q2M3W8 571 aa3.46□□□□□ -1.86
SPG11-211ENST00000558561 KRTAP21-3Q3LHN1 58 aa3.46□□□□□ -1.86
SPG11-211ENST00000558561 CDONQ4KMG0 1287 aa3.46□□□□□ -1.86
SPG11-211ENST00000558561 TMEM155Q4W5P6 130 aa3.46□□□□□ -1.86
SPG11-211ENST00000558561 SLC25A30Q5SVS4 291 aa3.46□□□□□ -1.86
SPG11-211ENST00000558561 LDLRAD2Q5SZI1 272 aa3.46□□□□□ -1.86
SPG11-211ENST00000558561 TMEM42Q69YG0 159 aa3.46□□□□□ -1.86
SPG11-211ENST00000558561 HCP5Q6MZN7 132 aa3.46□□□□□ -1.86
SPG11-211ENST00000558561 FAM53AQ6NSI3 398 aaPredicted RBP3.46□□□□□ -1.86
SPG11-211ENST00000558561 ZFP1Q6P2D0 407 aa3.46□□□□□ -1.86
SPG11-211ENST00000558561 KCTD18Q6PI47 426 aaPredicted RBP3.46□□□□□ -1.86
SPG11-211ENST00000558561 HAGHLQ6PII5 290 aaPredicted RBP3.46□□□□□ -1.86
SPG11-211ENST00000558561 DEGS2Q6QHC5 323 aa3.46□□□□□ -1.86
SPG11-211ENST00000558561 UNQ6126/PRO20091Q6UXV3 157 aa3.46□□□□□ -1.86
SPG11-211ENST00000558561 BAIAP2L2Q6UXY1 529 aa3.46□□□□□ -1.86
SPG11-211ENST00000558561 Q6ZSR3 168 aa3.46□□□□□ -1.86
SPG11-211ENST00000558561 KCTD8Q6ZWB6 473 aa3.46□□□□□ -1.86
SPG11-211ENST00000558561 BTN2A1Q7KYR7 527 aa3.46□□□□□ -1.86
SPG11-211ENST00000558561 KRT74Q7RTS7 529 aa3.46□□□□□ -1.86
SPG11-211ENST00000558561 C1orf174Q8IYL3 243 aa3.46□□□□□ -1.86
SPG11-211ENST00000558561 C11orf42Q8N5U0 333 aa3.46□□□□□ -1.86
SPG11-211ENST00000558561 Q8N7P7 452 aa3.46□□□□□ -1.86
SPG11-211ENST00000558561 SIGLECL1Q8N7X8 197 aa3.46□□□□□ -1.86
SPG11-211ENST00000558561 OR4M1Q8NGD0 313 aa3.46□□□□□ -1.86
SPG11-211ENST00000558561 OR52H1Q8NGJ2 320 aa3.46□□□□□ -1.86
SPG11-211ENST00000558561 OR13C5Q8NGS8 318 aa3.46□□□□□ -1.86
SPG11-211ENST00000558561 OR2G2Q8NGZ5 317 aa3.46□□□□□ -1.86
SPG11-211ENST00000558561 OR2T27Q8NH04 317 aa3.46□□□□□ -1.86
SPG11-211ENST00000558561 OR8S1Q8NH09 359 aa3.46□□□□□ -1.86
SPG11-211ENST00000558561 ANGPTL6Q8NI99 470 aa3.46□□□□□ -1.86
SPG11-211ENST00000558561 CYGBQ8WWM9 190 aa3.46□□□□□ -1.86
SPG11-211ENST00000558561 AQP3Q92482 292 aa3.46□□□□□ -1.86
SPG11-211ENST00000558561 POP5Q969H6 163 aaKnown RBP3.46□□□□□ -1.86
SPG11-211ENST00000558561 RFT1Q96AA3 541 aa3.46□□□□□ -1.86
SPG11-211ENST00000558561 PELI1Q96FA3 418 aa3.46□□□□□ -1.86
SPG11-211ENST00000558561 TIMD4Q96H15 378 aa3.46□□□□□ -1.86
SPG11-211ENST00000558561 C4orf36Q96KX1 117 aa3.46□□□□□ -1.86
SPG11-211ENST00000558561 GAFA1Q96PS6 74 aa3.46□□□□□ -1.86
SPG11-211ENST00000558561 PDCD1LG2Q9BQ51 273 aa3.46□□□□□ -1.86
SPG11-211ENST00000558561 NUDT16L1Q9BRJ7 211 aaKnown RBP3.46□□□□□ -1.86
SPG11-211ENST00000558561 SLC25A33Q9BSK2 321 aa3.46□□□□□ -1.86
SPG11-211ENST00000558561 C9orf16Q9BUW7 83 aa3.46□□□□□ -1.86
SPG11-211ENST00000558561 MROQ9BYG7 248 aa3.46□□□□□ -1.86
SPG11-211ENST00000558561 TLNRD1Q9H1K6 362 aa3.46□□□□□ -1.86
SPG11-211ENST00000558561 HIPK2Q9H2X6 1198 aa3.46□□□□□ -1.86
SPG11-211ENST00000558561 MTCH1Q9NZJ7 389 aa3.46□□□□□ -1.86
SPG11-211ENST00000558561 WARS2Q9UGM6 360 aaKnown RBP3.46□□□□□ -1.86
SPG11-211ENST00000558561 NUFIP1Q9UHK0 495 aaKnown RBP3.46□□□□□ -1.86
SPG11-211ENST00000558561 ZNF222Q9UK12 451 aa3.46□□□□□ -1.86
SPG11-211ENST00000558561 SNX5Q9Y5X3 404 aa3.46□□□□□ -1.86
SPG11-211ENST00000558561 TRAV39A0A0B4J263 110 aa3.45□□□□□ -1.86
SPG11-211ENST00000558561 IGHV2-70DA0A0C4DH43 119 aa3.45□□□□□ -1.86
SPG11-211ENST00000558561 CENPVL3A0A0U1RRI6 287 aa3.45□□□□□ -1.86
SPG11-211ENST00000558561 ZNF816-ZNF321PA0A0X1KG74 233 aa3.45□□□□□ -1.86
SPG11-211ENST00000558561 DAPL1A0PJW8 107 aa3.45□□□□□ -1.86
SPG11-211ENST00000558561 PQLC2LA1A4F0 135 aa3.45□□□□□ -1.86
SPG11-211ENST00000558561 MAGEA13PA6NCF6 341 aa3.45□□□□□ -1.86
SPG11-211ENST00000558561 RFPL4AA6NLU0 287 aa3.45□□□□□ -1.86
SPG11-211ENST00000558561 SRRM5B3KS81 715 aa3.45□□□□□ -1.86
SPG11-211ENST00000558561 RFPL4AL1F8VTS6 287 aa3.45□□□□□ -1.86
SPG11-211ENST00000558561 HSPA12AO43301 675 aa3.45□□□□□ -1.86
SPG11-211ENST00000558561 KCNAB3O43448 404 aa3.45□□□□□ -1.86
SPG11-211ENST00000558561 ANGPTL7O43827 346 aa3.45□□□□□ -1.86
SPG11-211ENST00000558561 ZNF254O75437 659 aa3.45□□□□□ -1.86
SPG11-211ENST00000558561 FOXH1O75593 365 aa3.45□□□□□ -1.86
SPG11-211ENST00000558561 MMP23AO75900 390 aa3.45□□□□□ -1.86
SPG11-211ENST00000558561 DHRS3O75911 302 aa3.45□□□□□ -1.86
SPG11-211ENST00000558561 KRT8P05787 483 aa3.45□□□□□ -1.86
SPG11-211ENST00000558561 MMP9P14780 707 aa3.45□□□□□ -1.86
SPG11-211ENST00000558561 BCL3P20749 454 aa3.45□□□□□ -1.86
SPG11-211ENST00000558561 CCL1P22362 96 aa3.45□□□□□ -1.86
SPG11-211ENST00000558561 OMGP23515 440 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms