RNA–Protein interactions for RNA: ENST00000558335.5

GABPB1-207, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-207ENST00000558335 J3QR06 171 aa4.82□□□□□ -1.64
GABPB1-207ENST00000558335 M0R036 132 aa4.82□□□□□ -1.64
GABPB1-207ENST00000558335 CORTO00230 105 aa4.82□□□□□ -1.64
GABPB1-207ENST00000558335 AGRPO00253 132 aa4.82□□□□□ -1.64
GABPB1-207ENST00000558335 P2RY10O00398 339 aa4.82□□□□□ -1.64
GABPB1-207ENST00000558335 HMGB3O15347 200 aaKnown RBP4.82□□□□□ -1.64
GABPB1-207ENST00000558335 CCL25O15444 150 aa4.82□□□□□ -1.64
GABPB1-207ENST00000558335 TNFSF13O75888 250 aa4.82□□□□□ -1.64
GABPB1-207ENST00000558335 TTRP02766 147 aa4.82□□□□□ -1.64
GABPB1-207ENST00000558335 CTSDP07339 412 aaPredicted RBP4.82□□□□□ -1.64
GABPB1-207ENST00000558335 VSIG8P0DPA2 414 aa4.82□□□□□ -1.64
GABPB1-207ENST00000558335 SRFP11831 508 aa4.82□□□□□ -1.64
GABPB1-207ENST00000558335 ZNF28P17035 718 aa4.82□□□□□ -1.64
GABPB1-207ENST00000558335 CEACAM3P40198 252 aa4.82□□□□□ -1.64
GABPB1-207ENST00000558335 OR1D4P47884 311 aa4.82□□□□□ -1.64
GABPB1-207ENST00000558335 NXPH1P58417 271 aa4.82□□□□□ -1.64
GABPB1-207ENST00000558335 PCBD1P61457 104 aa4.82□□□□□ -1.64
GABPB1-207ENST00000558335 RPS15P62841 145 aaKnown RBP4.82□□□□□ -1.64
GABPB1-207ENST00000558335 QRFPP83859 136 aa4.82□□□□□ -1.64
GABPB1-207ENST00000558335 RHOGP84095 191 aa4.82□□□□□ -1.64
GABPB1-207ENST00000558335 FAM3AP98173 230 aa4.82□□□□□ -1.64
GABPB1-207ENST00000558335 PMP22Q01453 160 aa4.82□□□□□ -1.64
GABPB1-207ENST00000558335 OC90Q02509 493 aaPredicted RBP4.82□□□□□ -1.64
GABPB1-207ENST00000558335 HGFACQ04756 655 aa4.82□□□□□ -1.64
GABPB1-207ENST00000558335 C1orf61Q13536 156 aa4.82□□□□□ -1.64
GABPB1-207ENST00000558335 RBM39Q14498 530 aaKnown RBP4.82□□□□□ -1.64
GABPB1-207ENST00000558335 OR8B8Q15620 311 aa4.82□□□□□ -1.64
GABPB1-207ENST00000558335 EXT1Q16394 746 aa4.82□□□□□ -1.64
GABPB1-207ENST00000558335 MS4A18Q3C1V0 323 aa4.82□□□□□ -1.64
GABPB1-207ENST00000558335 TCTEX1D4Q5JR98 221 aa4.82□□□□□ -1.64
GABPB1-207ENST00000558335 DCAF12L2Q5VW00 463 aa4.82□□□□□ -1.64
GABPB1-207ENST00000558335 OR2T2Q6IF00 324 aa4.82□□□□□ -1.64
GABPB1-207ENST00000558335 GLIPR1L1Q6UWM5 242 aa4.82□□□□□ -1.64
GABPB1-207ENST00000558335 UNQ6494/PRO21346Q6UXR6 183 aa4.82□□□□□ -1.64
GABPB1-207ENST00000558335 ZNF705AQ6ZN79 300 aaPredicted RBP4.82□□□□□ -1.64
GABPB1-207ENST00000558335 LRRC69Q6ZNQ3 347 aa4.82□□□□□ -1.64
GABPB1-207ENST00000558335 TMEM144Q7Z5S9 345 aa4.82□□□□□ -1.64
GABPB1-207ENST00000558335 SULF2Q8IWU5 870 aa4.82□□□□□ -1.64
GABPB1-207ENST00000558335 ZNF100Q8IYN0 542 aa4.82□□□□□ -1.64
GABPB1-207ENST00000558335 LYG1Q8N1E2 194 aa4.82□□□□□ -1.64
GABPB1-207ENST00000558335 OR4D6Q8NGJ1 314 aa4.82□□□□□ -1.64
GABPB1-207ENST00000558335 OR51A2Q8NGJ7 313 aa4.82□□□□□ -1.64
GABPB1-207ENST00000558335 OR4D5Q8NGN0 318 aa4.82□□□□□ -1.64
GABPB1-207ENST00000558335 OR10AC1Q8NH08 325 aa4.82□□□□□ -1.64
GABPB1-207ENST00000558335 FNDC9Q8TBE3 224 aa4.82□□□□□ -1.64
GABPB1-207ENST00000558335 RNF138Q8WVD3 245 aa4.82□□□□□ -1.64
GABPB1-207ENST00000558335 WFDC12Q8WWY7 111 aa4.82□□□□□ -1.64
GABPB1-207ENST00000558335 DVL3Q92997 716 aaPredicted RBP4.82□□□□□ -1.64
GABPB1-207ENST00000558335 NKD1Q969G9 470 aa4.82□□□□□ -1.64
GABPB1-207ENST00000558335 TOMM40LQ969M1 308 aa4.82□□□□□ -1.64
GABPB1-207ENST00000558335 NTNG2Q96CW9 530 aa4.82□□□□□ -1.64
GABPB1-207ENST00000558335 KIRREL1Q96J84 757 aa4.82□□□□□ -1.64
GABPB1-207ENST00000558335 JSRP1Q96MG2 331 aaPredicted RBP4.82□□□□□ -1.64
GABPB1-207ENST00000558335 IMMP2LQ96T52 175 aa4.82□□□□□ -1.64
GABPB1-207ENST00000558335 AMELYQ99218 206 aa4.82□□□□□ -1.64
GABPB1-207ENST00000558335 SPIN2AQ99865 258 aa4.82□□□□□ -1.64
GABPB1-207ENST00000558335 HIST1H2BLQ99880 126 aa4.82□□□□□ -1.64
GABPB1-207ENST00000558335 SPIN2BQ9BPZ2 258 aa4.82□□□□□ -1.64
GABPB1-207ENST00000558335 TM2D1Q9BX74 207 aa4.82□□□□□ -1.64
GABPB1-207ENST00000558335 PBX4Q9BYU1 374 aa4.82□□□□□ -1.64
GABPB1-207ENST00000558335 SELENOIQ9C0D9 397 aa4.82□□□□□ -1.64
GABPB1-207ENST00000558335 VN1R1Q9GZP7 353 aa4.82□□□□□ -1.64
GABPB1-207ENST00000558335 NKX2-4Q9H2Z4 354 aa4.82□□□□□ -1.64
GABPB1-207ENST00000558335 TCEAL2Q9H3H9 227 aaPredicted RBP4.82□□□□□ -1.64
GABPB1-207ENST00000558335 CST9LQ9H4G1 147 aa4.82□□□□□ -1.64
GABPB1-207ENST00000558335 METTL7AQ9H8H3 244 aa4.82□□□□□ -1.64
GABPB1-207ENST00000558335 WDR54Q9H977 334 aa4.82□□□□□ -1.64
GABPB1-207ENST00000558335 FGF21Q9NSA1 209 aa4.82□□□□□ -1.64
GABPB1-207ENST00000558335 MRPL27Q9P0M9 148 aaKnown RBP4.82□□□□□ -1.64
GABPB1-207ENST00000558335 CLEC1BQ9P126 229 aa4.82□□□□□ -1.64
GABPB1-207ENST00000558335 B3GAT1Q9P2W7 334 aa4.82□□□□□ -1.64
GABPB1-207ENST00000558335 CGGBP1Q9UFW8 167 aaPredicted RBP4.82□□□□□ -1.64
GABPB1-207ENST00000558335 HSF4Q9ULV5 492 aa4.82□□□□□ -1.64
GABPB1-207ENST00000558335 VSIG4Q9Y279 399 aa4.82□□□□□ -1.64
GABPB1-207ENST00000558335 NSG2Q9Y328 171 aa4.82□□□□□ -1.64
GABPB1-207ENST00000558335 PTRH2Q9Y3E5 179 aaKnown RBP4.82□□□□□ -1.64
GABPB1-207ENST00000558335 TBL2Q9Y4P3 447 aaKnown RBP4.82□□□□□ -1.64
GABPB1-207ENST00000558335 CSAG2Q9Y5P2 127 aa4.82□□□□□ -1.64
GABPB1-207ENST00000558335 KIF26BQ2KJY2 2108 aa4.82□□□□□ -1.64
GABPB1-207ENST00000558335 MPDZO75970 2070 aa4.82□□□□□ -1.64
GABPB1-207ENST00000558335 THADAQ6YHU6 1953 aa4.82□□□□□ -1.64
GABPB1-207ENST00000558335 IGHV1OR15-9A0A0B4J2B8 117 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 DUXBA0A1W2PPF3 345 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 LRP5LA4QPB2 252 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 NKX2-6A6NCS4 301 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 FAM90A10PA6NDY2 464 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 FAM90A18PA6NE21 464 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 FAM90A16PA6NEW6 464 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 FAM90A20PA6NIJ5 464 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 FAM90A8PA6NJQ4 464 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 FAM90A7PA6NKC0 464 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 AQP7P3A6NL99 342 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 ZNF705GA8MUZ8 300 aaPredicted RBP4.81□□□□□ -1.64
GABPB1-207ENST00000558335 FAM90A22PA8MWA6 464 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 FAM90A12PA8MX19 464 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 FAM90A5PA8MXJ8 464 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 FAM90A23PA8MXZ1 464 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 EEF1E1-BLOC1S5C9J1V9 151 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 UMAD1C9J7I0 102 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 H3BMH7 237 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms