RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 GMPPBQ9Y5P6 360 aa12.46□□□□□ -0.41
TPM1-211ENST00000558314 TCRBV4S1A1TA0A5B7 111 aa12.45□□□□□ -0.42
TPM1-211ENST00000558314 ODAMA1E959 279 aa12.45□□□□□ -0.42
TPM1-211ENST00000558314 LEUTXA8MZ59 168 aa12.45□□□□□ -0.42
TPM1-211ENST00000558314 KDM4BO94953 1096 aa12.45□□□□□ -0.42
TPM1-211ENST00000558314 ISG15P05161 165 aa12.45□□□□□ -0.42
TPM1-211ENST00000558314 ALPLP05186 524 aa12.45□□□□□ -0.42
TPM1-211ENST00000558314 CD33P20138 364 aa12.45□□□□□ -0.42
TPM1-211ENST00000558314 PTGFRP43088 359 aa12.45□□□□□ -0.42
TPM1-211ENST00000558314 GLP1RP43220 463 aa12.45□□□□□ -0.42
TPM1-211ENST00000558314 ZSCAN26Q16670 478 aa12.45□□□□□ -0.42
TPM1-211ENST00000558314 RTN4RL2Q86UN3 420 aa12.45□□□□□ -0.42
TPM1-211ENST00000558314 CBR4Q8N4T8 237 aa12.45□□□□□ -0.42
TPM1-211ENST00000558314 AKR1E2Q96JD6 320 aa12.45□□□□□ -0.42
TPM1-211ENST00000558314 GPER1Q99527 375 aa12.45□□□□□ -0.42
TPM1-211ENST00000558314 SLC25A33Q9BSK2 321 aa12.45□□□□□ -0.42
TPM1-211ENST00000558314 WNT10AQ9GZT5 417 aa12.45□□□□□ -0.42
TPM1-211ENST00000558314 ISG20L2Q9H9L3 353 aaKnown RBP12.45□□□□□ -0.42
TPM1-211ENST00000558314 ZNF286AQ9HBT8 521 aa12.45□□□□□ -0.42
TPM1-211ENST00000558314 NOTCH3Q9UM47 2321 aa12.44□□□□□ -0.42
TPM1-211ENST00000558314 DSCAML1Q8TD84 2053 aa12.44□□□□□ -0.42
TPM1-211ENST00000558314 OR4C45A6NMZ5 311 aa12.44□□□□□ -0.42
TPM1-211ENST00000558314 PF4P02776 101 aa12.44□□□□□ -0.42
TPM1-211ENST00000558314 IGLL1P15814 213 aa12.44□□□□□ -0.42
TPM1-211ENST00000558314 CCR9P51686 369 aa12.44□□□□□ -0.42
TPM1-211ENST00000558314 SNRPGP62308 76 aaKnown RBP12.44□□□□□ -0.42
TPM1-211ENST00000558314 FBLN7Q53RD9 439 aa12.44□□□□□ -0.42
TPM1-211ENST00000558314 FDX2Q6P4F2 183 aa12.44□□□□□ -0.42
TPM1-211ENST00000558314 HEPN1Q6WQI6 88 aa12.44□□□□□ -0.42
TPM1-211ENST00000558314 Q6ZPA2 131 aa12.44□□□□□ -0.42
TPM1-211ENST00000558314 LEAP2Q969E1 77 aa12.44□□□□□ -0.42
TPM1-211ENST00000558314 OCSTAMPQ9BR26 566 aa12.44□□□□□ -0.42
TPM1-211ENST00000558314 FAM192AQ9GZU8 254 aa12.44□□□□□ -0.42
TPM1-211ENST00000558314 COMMD4Q9H0A8 199 aa12.44□□□□□ -0.42
TPM1-211ENST00000558314 PPIL3Q9H2H8 161 aaKnown RBP12.44□□□□□ -0.42
TPM1-211ENST00000558314 SEBOXQ9HB31 216 aaPredicted RBP12.44□□□□□ -0.42
TPM1-211ENST00000558314 DHDHQ9UQ10 334 aa12.44□□□□□ -0.42
TPM1-211ENST00000558314 MYRFQ9Y2G1 1151 aa12.44□□□□□ -0.42
TPM1-211ENST00000558314 KIAA2026Q5HYC2 2103 aa12.43□□□□□ -0.42
TPM1-211ENST00000558314 ADARB2-AS1A8MUL3 147 aa12.43□□□□□ -0.42
TPM1-211ENST00000558314 FAM90A22PA8MWA6 464 aa12.43□□□□□ -0.42
TPM1-211ENST00000558314 E9PI62 339 aa12.43□□□□□ -0.42
TPM1-211ENST00000558314 H0YJX3 145 aa12.43□□□□□ -0.42
TPM1-211ENST00000558314 J3QRE1 110 aa12.43□□□□□ -0.42
TPM1-211ENST00000558314 SLC33A1O00400 549 aaPredicted RBP12.43□□□□□ -0.42
TPM1-211ENST00000558314 CEACAM3P40198 252 aa12.43□□□□□ -0.42
TPM1-211ENST00000558314 SOX2P48431 317 aa12.43□□□□□ -0.42
TPM1-211ENST00000558314 ALDH3A2P51648 485 aa12.43□□□□□ -0.42
TPM1-211ENST00000558314 PRRX1P54821 245 aa12.43□□□□□ -0.42
TPM1-211ENST00000558314 BDH1Q02338 343 aa12.43□□□□□ -0.42
TPM1-211ENST00000558314 KISS1Q15726 138 aa12.43□□□□□ -0.42
TPM1-211ENST00000558314 PAN3Q58A45 887 aaKnown RBP12.43□□□□□ -0.42
TPM1-211ENST00000558314 UTF1Q5T230 341 aa12.43□□□□□ -0.42
TPM1-211ENST00000558314 TPTE2P1Q5T6R2 138 aa12.43□□□□□ -0.42
TPM1-211ENST00000558314 KPRPQ5T749 579 aaPredicted RBP12.43□□□□□ -0.42
TPM1-211ENST00000558314 Q6P435 159 aa12.43□□□□□ -0.42
TPM1-211ENST00000558314 OR5D14Q8NGL3 314 aa12.43□□□□□ -0.42
TPM1-211ENST00000558314 OR10K1Q8NGX5 313 aa12.43□□□□□ -0.42
TPM1-211ENST00000558314 OR5AK2Q8NH90 309 aa12.43□□□□□ -0.42
TPM1-211ENST00000558314 PHF21AQ96BD5 680 aa12.43□□□□□ -0.42
TPM1-211ENST00000558314 COQ2Q96H96 371 aa12.43□□□□□ -0.42
TPM1-211ENST00000558314 PDCD1LG2Q9BQ51 273 aa12.43□□□□□ -0.42
TPM1-211ENST00000558314 TAS2R3Q9NYW6 316 aa12.43□□□□□ -0.42
TPM1-211ENST00000558314 EXOGQ9Y2C4 368 aaKnown RBP12.43□□□□□ -0.42
TPM1-211ENST00000558314 MEIKINA0A087WXM9 373 aa12.42□□□□□ -0.42
TPM1-211ENST00000558314 MAGEB3O15480 346 aa12.42□□□□□ -0.42
TPM1-211ENST00000558314 SULT1B1O43704 296 aa12.42□□□□□ -0.42
TPM1-211ENST00000558314 FADS2O95864 444 aaKnown RBP12.42□□□□□ -0.42
TPM1-211ENST00000558314 DBTP11182 482 aaKnown RBP12.42□□□□□ -0.42
TPM1-211ENST00000558314 MNDAP41218 407 aa12.42□□□□□ -0.42
TPM1-211ENST00000558314 GBX2P52951 348 aaPredicted RBP12.42□□□□□ -0.42
TPM1-211ENST00000558314 GALEQ14376 348 aa12.42□□□□□ -0.42
TPM1-211ENST00000558314 HES1Q14469 280 aa12.42□□□□□ -0.42
TPM1-211ENST00000558314 HLA-DRB5Q30154 266 aa12.42□□□□□ -0.42
TPM1-211ENST00000558314 ZNF691Q5VV52 312 aa12.42□□□□□ -0.42
TPM1-211ENST00000558314 C10orf99Q6UWK7 81 aa12.42□□□□□ -0.42
TPM1-211ENST00000558314 REC114Q7Z4M0 266 aa12.42□□□□□ -0.42
TPM1-211ENST00000558314 SERPINA12Q8IW75 414 aa12.42□□□□□ -0.42
TPM1-211ENST00000558314 TNFAIP8L1Q8WVP5 186 aa12.42□□□□□ -0.42
TPM1-211ENST00000558314 RPEQ96AT9 228 aa12.42□□□□□ -0.42
TPM1-211ENST00000558314 LIN7BQ9HAP6 207 aa12.42□□□□□ -0.42
TPM1-211ENST00000558314 NECAP2Q9NVZ3 263 aa12.42□□□□□ -0.42
TPM1-211ENST00000558314 AURKAIP1Q9NWT8 199 aaPredicted RBP12.42□□□□□ -0.42
TPM1-211ENST00000558314 KIF25Q9UIL4 384 aa12.42□□□□□ -0.42
TPM1-211ENST00000558314 TRAV39A0A0B4J263 110 aa12.41□□□□□ -0.42
TPM1-211ENST00000558314 ZNF729A6NN14 1252 aaPredicted RBP12.41□□□□□ -0.42
TPM1-211ENST00000558314 H3BNX3 289 aa12.41□□□□□ -0.42
TPM1-211ENST00000558314 BUB1B-PAK6H3BSN5 160 aa12.41□□□□□ -0.42
TPM1-211ENST00000558314 ZFPL1O95159 310 aa12.41□□□□□ -0.42
TPM1-211ENST00000558314 MT-ND2P03891 347 aa12.41□□□□□ -0.42
TPM1-211ENST00000558314 GNG10P50151 68 aa12.41□□□□□ -0.42
TPM1-211ENST00000558314 LOXL3P58215 753 aa12.41□□□□□ -0.42
TPM1-211ENST00000558314 SLC25A30Q5SVS4 291 aa12.41□□□□□ -0.42
TPM1-211ENST00000558314 C16orf82Q7Z2V1 217 aa12.41□□□□□ -0.42
TPM1-211ENST00000558314 SAXO1Q8IYX7 474 aa12.41□□□□□ -0.42
TPM1-211ENST00000558314 CHST4Q8NCG5 386 aa12.41□□□□□ -0.42
TPM1-211ENST00000558314 OR4X2Q8NGF9 303 aa12.41□□□□□ -0.42
TPM1-211ENST00000558314 RFESDQ8TAC1 157 aa12.41□□□□□ -0.42
TPM1-211ENST00000558314 WIPF2Q8TF74 440 aaPredicted RBP12.41□□□□□ -0.42
TPM1-211ENST00000558314 CORO2AQ92828 525 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms