RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 ABCB10Q9NRK6 738 aa14.12□□□□□ -0.15
SNX1-203ENST00000558040 AK3Q9UIJ7 227 aa14.12□□□□□ -0.15
SNX1-203ENST00000558040 ZNF222Q9UK12 451 aa14.12□□□□□ -0.15
SNX1-203ENST00000558040 MEIOCA2RUB1 952 aa14.11□□□□□ -0.15
SNX1-203ENST00000558040 H7C1Q1 480 aa14.11□□□□□ -0.15
SNX1-203ENST00000558040 LY6HO94772 140 aa14.11□□□□□ -0.15
SNX1-203ENST00000558040 GYPAP02724 150 aa14.11□□□□□ -0.15
SNX1-203ENST00000558040 CSF3P09919 207 aa14.11□□□□□ -0.15
SNX1-203ENST00000558040 IL7P13232 177 aa14.11□□□□□ -0.15
SNX1-203ENST00000558040 TMEM33P57088 247 aa14.11□□□□□ -0.15
SNX1-203ENST00000558040 GUCA2AQ02747 115 aa14.11□□□□□ -0.15
SNX1-203ENST00000558040 BAK1Q16611 211 aa14.11□□□□□ -0.15
SNX1-203ENST00000558040 ATPAF1Q5TC12 328 aaPredicted RBP14.11□□□□□ -0.15
SNX1-203ENST00000558040 OLFML2AQ68BL7 652 aa14.11□□□□□ -0.15
SNX1-203ENST00000558040 BRICD5Q6PL45 260 aa14.11□□□□□ -0.15
SNX1-203ENST00000558040 MUC20Q8N307 709 aaPredicted RBP14.11□□□□□ -0.15
SNX1-203ENST00000558040 NUDCD2Q8WVJ2 157 aa14.11□□□□□ -0.15
SNX1-203ENST00000558040 SDSLQ96GA7 329 aa14.11□□□□□ -0.15
SNX1-203ENST00000558040 SNX22Q96L94 193 aa14.11□□□□□ -0.15
SNX1-203ENST00000558040 RIMS4Q9H426 269 aaPredicted RBP14.11□□□□□ -0.15
SNX1-203ENST00000558040 C12orf4Q9NQ89 552 aa14.11□□□□□ -0.15
SNX1-203ENST00000558040 IFT46Q9NQC8 304 aa14.11□□□□□ -0.15
SNX1-203ENST00000558040 ZNF701Q9NV72 531 aaPredicted RBP14.11□□□□□ -0.15
SNX1-203ENST00000558040 ETAA1Q9NY74 926 aa14.11□□□□□ -0.15
SNX1-203ENST00000558040 TAS2R8Q9NYW2 309 aa14.11□□□□□ -0.15
SNX1-203ENST00000558040 ELF5Q9UKW6 265 aaPredicted RBP14.11□□□□□ -0.15
SNX1-203ENST00000558040 PPIHO43447 177 aaKnown RBP14.1□□□□□ -0.15
SNX1-203ENST00000558040 GSTT2BP0CG30 244 aa14.1□□□□□ -0.15
SNX1-203ENST00000558040 DTYMKP23919 212 aa14.1□□□□□ -0.15
SNX1-203ENST00000558040 AP3S2P59780 193 aa14.1□□□□□ -0.15
SNX1-203ENST00000558040 IL13RA1P78552 427 aa14.1□□□□□ -0.15
SNX1-203ENST00000558040 ZMYND11Q15326 602 aa14.1□□□□□ -0.15
SNX1-203ENST00000558040 CARTPTQ16568 116 aa14.1□□□□□ -0.15
SNX1-203ENST00000558040 ZNF788Q6ZQV5 615 aa14.1□□□□□ -0.15
SNX1-203ENST00000558040 SLC36A1Q7Z2H8 476 aa14.1□□□□□ -0.15
SNX1-203ENST00000558040 BPIFB2Q8N4F0 458 aa14.1□□□□□ -0.15
SNX1-203ENST00000558040 ZFAND2BQ8WV99 257 aa14.1□□□□□ -0.15
SNX1-203ENST00000558040 TRIM63Q969Q1 353 aa14.1□□□□□ -0.15
SNX1-203ENST00000558040 MED30Q96HR3 178 aa14.1□□□□□ -0.15
SNX1-203ENST00000558040 CHST6Q9GZX3 395 aa14.1□□□□□ -0.15
SNX1-203ENST00000558040 FAM234AQ9H0X4 552 aa14.1□□□□□ -0.15
SNX1-203ENST00000558040 PPA2Q9H2U2 334 aa14.1□□□□□ -0.15
SNX1-203ENST00000558040 CHMP1AQ9HD42 196 aaPredicted RBP14.1□□□□□ -0.15
SNX1-203ENST00000558040 MTFP1Q9UDX5 166 aa14.1□□□□□ -0.15
SNX1-203ENST00000558040 RBMX2Q9Y388 322 aaKnown RBP14.1□□□□□ -0.15
SNX1-203ENST00000558040 ISPDA4D126 451 aa14.09□□□□□ -0.15
SNX1-203ENST00000558040 SIGLEC5O15389 551 aa14.09□□□□□ -0.15
SNX1-203ENST00000558040 SSX5O60225 188 aa14.09□□□□□ -0.15
SNX1-203ENST00000558040 PSPNO60542 156 aa14.09□□□□□ -0.15
SNX1-203ENST00000558040 NDUFS7O75251 213 aa14.09□□□□□ -0.15
SNX1-203ENST00000558040 ECDO95905 644 aaPredicted RBP14.09□□□□□ -0.15
SNX1-203ENST00000558040 IGHV2-70P01814 119 aa14.09□□□□□ -0.15
SNX1-203ENST00000558040 IGHV4-39P01824 125 aa14.09□□□□□ -0.15
SNX1-203ENST00000558040 CSN2P05814 226 aa14.09□□□□□ -0.15
SNX1-203ENST00000558040 PAX1P15863 534 aa14.09□□□□□ -0.15
SNX1-203ENST00000558040 RCVRNP35243 200 aa14.09□□□□□ -0.15
SNX1-203ENST00000558040 GDNFP39905 211 aa14.09□□□□□ -0.15
SNX1-203ENST00000558040 ATP5J2P56134 94 aa14.09□□□□□ -0.15
SNX1-203ENST00000558040 GRK1Q15835 563 aa14.09□□□□□ -0.15
SNX1-203ENST00000558040 DCDC5Q6ZRR9 648 aa14.09□□□□□ -0.15
SNX1-203ENST00000558040 OR5D13Q8NGL4 314 aa14.09□□□□□ -0.15
SNX1-203ENST00000558040 GAFA1Q96PS6 74 aa14.09□□□□□ -0.15
SNX1-203ENST00000558040 CCL13Q99616 98 aa14.09□□□□□ -0.15
SNX1-203ENST00000558040 OCSTAMPQ9BR26 566 aa14.09□□□□□ -0.15
SNX1-203ENST00000558040 LIME1Q9H400 295 aa14.09□□□□□ -0.15
SNX1-203ENST00000558040 TMEM165Q9HC07 324 aa14.09□□□□□ -0.15
SNX1-203ENST00000558040 KLK11Q9UBX7 282 aa14.09□□□□□ -0.15
SNX1-203ENST00000558040 ZNF107Q9UII5 783 aaPredicted RBP14.09□□□□□ -0.15
SNX1-203ENST00000558040 COL12A1Q99715 3063 aa14.08□□□□□ -0.16
SNX1-203ENST00000558040 A0A1W2PQ09 198 aa14.08□□□□□ -0.16
SNX1-203ENST00000558040 TMEM82A0PJX8 343 aa14.08□□□□□ -0.16
SNX1-203ENST00000558040 MEIS3P1A6NDR6 274 aa14.08□□□□□ -0.16
SNX1-203ENST00000558040 POM121CA8CG34 1229 aa14.08□□□□□ -0.16
SNX1-203ENST00000558040 K7N7A8 449 aa14.08□□□□□ -0.16
SNX1-203ENST00000558040 MGST3O14880 152 aa14.08□□□□□ -0.16
SNX1-203ENST00000558040 TMPRSS2O15393 492 aa14.08□□□□□ -0.16
SNX1-203ENST00000558040 ORC5O43913 435 aa14.08□□□□□ -0.16
SNX1-203ENST00000558040 ZNF737O75373 536 aa14.08□□□□□ -0.16
SNX1-203ENST00000558040 TFF1P04155 84 aa14.08□□□□□ -0.16
SNX1-203ENST00000558040 CSF1P09603 554 aa14.08□□□□□ -0.16
SNX1-203ENST00000558040 GPR6P46095 362 aaPredicted RBP14.08□□□□□ -0.16
SNX1-203ENST00000558040 OR3A1P47881 315 aa14.08□□□□□ -0.16
SNX1-203ENST00000558040 PDLIM4P50479 330 aa14.08□□□□□ -0.16
SNX1-203ENST00000558040 ATXN7L3Q14CW9 347 aaPredicted RBP14.08□□□□□ -0.16
SNX1-203ENST00000558040 TMEM155Q4W5P6 130 aa14.08□□□□□ -0.16
SNX1-203ENST00000558040 ZNF57Q68EA5 555 aaPredicted RBP14.08□□□□□ -0.16
SNX1-203ENST00000558040 C17orf107Q6ZR85 190 aa14.08□□□□□ -0.16
SNX1-203ENST00000558040 TOMM5Q8N4H5 51 aa14.08□□□□□ -0.16
SNX1-203ENST00000558040 TMEM185AQ8NFB2 350 aa14.08□□□□□ -0.16
SNX1-203ENST00000558040 OR4S1Q8NGB4 309 aa14.08□□□□□ -0.16
SNX1-203ENST00000558040 DYRK2Q92630 601 aa14.08□□□□□ -0.16
SNX1-203ENST00000558040 TMEM246Q9BRR3 403 aa14.08□□□□□ -0.16
SNX1-203ENST00000558040 GSX2Q9BZM3 304 aa14.08□□□□□ -0.16
SNX1-203ENST00000558040 KAAG1Q9UBP8 84 aa14.08□□□□□ -0.16
SNX1-203ENST00000558040 METRNQ9UJH8 293 aa14.08□□□□□ -0.16
SNX1-203ENST00000558040 DOPEY2Q9Y3R5 2298 aa14.08□□□□□ -0.16
SNX1-203ENST00000558040 TMEM30CPA0ZSE6 113 aa14.07□□□□□ -0.16
SNX1-203ENST00000558040 FUOMA2VDF0 154 aa14.07□□□□□ -0.16
SNX1-203ENST00000558040 ADAM20O43506 726 aa14.07□□□□□ -0.16
SNX1-203ENST00000558040 LANCL1O43813 399 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms