RNA–Protein interactions for RNA: ENST00000557348.5

SHMT2-229, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,659 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-229ENST00000557348 C1orf185Q5T7R7 199 aa10.89□□□□□ -0.67
SHMT2-229ENST00000557348 ZNF585AQ6P3V2 769 aa10.89□□□□□ -0.67
SHMT2-229ENST00000557348 FBXW12Q6X9E4 464 aa10.89□□□□□ -0.67
SHMT2-229ENST00000557348 Q8NFD4 153 aa10.89□□□□□ -0.67
SHMT2-229ENST00000557348 PPP1R1CQ8WVI7 109 aa10.89□□□□□ -0.67
SHMT2-229ENST00000557348 NUDCD2Q8WVJ2 157 aa10.89□□□□□ -0.67
SHMT2-229ENST00000557348 TCTEX1D2Q8WW35 142 aa10.89□□□□□ -0.67
SHMT2-229ENST00000557348 CMBLQ96DG6 245 aa10.89□□□□□ -0.67
SHMT2-229ENST00000557348 ARHGAP5-AS1Q96IT6 56 aa10.89□□□□□ -0.67
SHMT2-229ENST00000557348 SMIM8Q96KF7 97 aa10.89□□□□□ -0.67
SHMT2-229ENST00000557348 ZNF75AQ96N20 296 aa10.89□□□□□ -0.67
SHMT2-229ENST00000557348 PECRQ9BY49 303 aa10.89□□□□□ -0.67
SHMT2-229ENST00000557348 CHST6Q9GZX3 395 aa10.89□□□□□ -0.67
SHMT2-229ENST00000557348 PLK3Q9H4B4 646 aa10.89□□□□□ -0.67
SHMT2-229ENST00000557348 GSN-AS1Q9NRJ2 163 aa10.89□□□□□ -0.67
SHMT2-229ENST00000557348 RCC2Q9P258 522 aaKnown RBP10.89□□□□□ -0.67
SHMT2-229ENST00000557348 DNAJC13O75165 2243 aa10.88□□□□□ -0.67
SHMT2-229ENST00000557348 CD300LBA8K4G0 201 aa10.88□□□□□ -0.67
SHMT2-229ENST00000557348 ZNF850A8MQ14 1090 aa10.88□□□□□ -0.67
SHMT2-229ENST00000557348 PSMB6P28072 239 aa10.88□□□□□ -0.67
SHMT2-229ENST00000557348 ECI1P42126 302 aa10.88□□□□□ -0.67
SHMT2-229ENST00000557348 TMEM50BP56557 158 aa10.88□□□□□ -0.67
SHMT2-229ENST00000557348 PLAC9Q5JTB6 97 aa10.88□□□□□ -0.67
SHMT2-229ENST00000557348 FAAP20Q6NZ36 180 aa10.88□□□□□ -0.67
SHMT2-229ENST00000557348 C1QL2Q7Z5L3 287 aa10.88□□□□□ -0.67
SHMT2-229ENST00000557348 MKXQ8IYA7 352 aa10.88□□□□□ -0.67
SHMT2-229ENST00000557348 OSR2Q8N2R0 312 aa10.88□□□□□ -0.67
SHMT2-229ENST00000557348 RXFP4Q8TDU9 374 aa10.88□□□□□ -0.67
SHMT2-229ENST00000557348 NRIP2Q9BQI9 281 aa10.88□□□□□ -0.67
SHMT2-229ENST00000557348 SMDT1Q9H4I9 107 aa10.88□□□□□ -0.67
SHMT2-229ENST00000557348 ASF1BQ9NVP2 202 aa10.88□□□□□ -0.67
SHMT2-229ENST00000557348 PLEKHJ1Q9NW61 149 aa10.88□□□□□ -0.67
SHMT2-229ENST00000557348 LPAR3Q9UBY5 353 aa10.88□□□□□ -0.67
SHMT2-229ENST00000557348 TINAGQ9UJW2 476 aa10.88□□□□□ -0.67
SHMT2-229ENST00000557348 STARD10Q9Y365 291 aa10.88□□□□□ -0.67
SHMT2-229ENST00000557348 WIPF3A6NGB9 483 aa10.87□□□□□ -0.67
SHMT2-229ENST00000557348 COLCA2A8K830 154 aa10.87□□□□□ -0.67
SHMT2-229ENST00000557348 RAC2P15153 192 aa10.87□□□□□ -0.67
SHMT2-229ENST00000557348 ADCYAP1P18509 176 aa10.87□□□□□ -0.67
SHMT2-229ENST00000557348 AGAP20933 346 aa10.87□□□□□ -0.67
SHMT2-229ENST00000557348 DTYMKP23919 212 aa10.87□□□□□ -0.67
SHMT2-229ENST00000557348 HAAOP46952 286 aa10.87□□□□□ -0.67
SHMT2-229ENST00000557348 PLEKHN1Q494U1 663 aaPredicted RBP10.87□□□□□ -0.67
SHMT2-229ENST00000557348 FAM209BQ5JX69 171 aa10.87□□□□□ -0.67
SHMT2-229ENST00000557348 ATPAF1Q5TC12 328 aaPredicted RBP10.87□□□□□ -0.67
SHMT2-229ENST00000557348 RNF144BQ7Z419 303 aa10.87□□□□□ -0.67
SHMT2-229ENST00000557348 LINC00596Q86U02 117 aa10.87□□□□□ -0.67
SHMT2-229ENST00000557348 HOGA1Q86XE5 327 aa10.87□□□□□ -0.67
SHMT2-229ENST00000557348 ZNF573Q86YE8 665 aa10.87□□□□□ -0.67
SHMT2-229ENST00000557348 C1QL4Q86Z23 238 aa10.87□□□□□ -0.67
SHMT2-229ENST00000557348 ZNF611Q8N823 705 aa10.87□□□□□ -0.67
SHMT2-229ENST00000557348 OR4K15Q8NH41 348 aa10.87□□□□□ -0.67
SHMT2-229ENST00000557348 OR51F2Q8NH61 342 aa10.87□□□□□ -0.67
SHMT2-229ENST00000557348 DVL3Q92997 716 aaPredicted RBP10.87□□□□□ -0.67
SHMT2-229ENST00000557348 SFXN3Q9BWM7 321 aa10.87□□□□□ -0.67
SHMT2-229ENST00000557348 TINAGL1Q9GZM7 467 aaPredicted RBP10.87□□□□□ -0.67
SHMT2-229ENST00000557348 WASF3Q9UPY6 502 aa10.87□□□□□ -0.67
SHMT2-229ENST00000557348 WDFY3Q8IZQ1 3526 aa10.87□□□□□ -0.67
SHMT2-229ENST00000557348 IGKV1-27A0A075B6S5 117 aa10.86□□□□□ -0.67
SHMT2-229ENST00000557348 A0A1W2PP11 408 aa10.86□□□□□ -0.67
SHMT2-229ENST00000557348 TNFSF13O75888 250 aa10.86□□□□□ -0.67
SHMT2-229ENST00000557348 LYZL6O75951 148 aa10.86□□□□□ -0.67
SHMT2-229ENST00000557348 IGKV3-15P01624 115 aa10.86□□□□□ -0.67
SHMT2-229ENST00000557348 FBP1P09467 338 aa10.86□□□□□ -0.67
SHMT2-229ENST00000557348 ZNF735P0CB33 412 aa10.86□□□□□ -0.67
SHMT2-229ENST00000557348 CCL2P13500 99 aa10.86□□□□□ -0.67
SHMT2-229ENST00000557348 RCC1P18754 421 aaPredicted RBP10.86□□□□□ -0.67
SHMT2-229ENST00000557348 MAS1LP35410 378 aa10.86□□□□□ -0.67
SHMT2-229ENST00000557348 WNT5AP41221 380 aa10.86□□□□□ -0.67
SHMT2-229ENST00000557348 TMPRSS3P57727 454 aa10.86□□□□□ -0.67
SHMT2-229ENST00000557348 GNG3P63215 75 aa10.86□□□□□ -0.67
SHMT2-229ENST00000557348 C3orf36Q3SXR2 165 aa10.86□□□□□ -0.67
SHMT2-229ENST00000557348 OR5H2Q8NGV7 314 aa10.86□□□□□ -0.67
SHMT2-229ENST00000557348 FAM57AQ8TBR7 257 aa10.86□□□□□ -0.67
SHMT2-229ENST00000557348 TLNRD1Q9H1K6 362 aa10.86□□□□□ -0.67
SHMT2-229ENST00000557348 TMPRSS5Q9H3S3 457 aa10.86□□□□□ -0.67
SHMT2-229ENST00000557348 DMRT1Q9Y5R6 373 aa10.86□□□□□ -0.67
SHMT2-229ENST00000557348 DBX1A6NMT0 343 aa10.85□□□□□ -0.67
SHMT2-229ENST00000557348 ZNF729A6NN14 1252 aaPredicted RBP10.85□□□□□ -0.67
SHMT2-229ENST00000557348 M0QYG6 137 aa10.85□□□□□ -0.67
SHMT2-229ENST00000557348 SPRY1O43609 319 aaPredicted RBP10.85□□□□□ -0.67
SHMT2-229ENST00000557348 SMPD2O60906 423 aa10.85□□□□□ -0.67
SHMT2-229ENST00000557348 CGAP01215 116 aa10.85□□□□□ -0.67
SHMT2-229ENST00000557348 HLA-AP01891 365 aaKnown RBP10.85□□□□□ -0.67
SHMT2-229ENST00000557348 CD5P06127 495 aa10.85□□□□□ -0.67
SHMT2-229ENST00000557348 AMY2BP19961 511 aa10.85□□□□□ -0.67
SHMT2-229ENST00000557348 HRH1P35367 487 aa10.85□□□□□ -0.67
SHMT2-229ENST00000557348 PPP1CBP62140 327 aa10.85□□□□□ -0.67
SHMT2-229ENST00000557348 IGSF11Q5DX21 431 aa10.85□□□□□ -0.67
SHMT2-229ENST00000557348 FAM74A1Q5RGS3 127 aa10.85□□□□□ -0.67
SHMT2-229ENST00000557348 VWA1Q6PCB0 445 aa10.85□□□□□ -0.67
SHMT2-229ENST00000557348 SSX8Q7RTT4 187 aa10.85□□□□□ -0.67
SHMT2-229ENST00000557348 STARD4Q96DR4 205 aa10.85□□□□□ -0.67
SHMT2-229ENST00000557348 AQP10Q96PS8 301 aa10.85□□□□□ -0.67
SHMT2-229ENST00000557348 MICU1Q9BPX6 476 aa10.85□□□□□ -0.67
SHMT2-229ENST00000557348 BCL2L14Q9BZR8 327 aa10.85□□□□□ -0.67
SHMT2-229ENST00000557348 PKIBQ9C010 78 aa10.85□□□□□ -0.67
SHMT2-229ENST00000557348 WDR13Q9H1Z4 485 aa10.85□□□□□ -0.67
SHMT2-229ENST00000557348 CHMP1AQ9HD42 196 aaPredicted RBP10.85□□□□□ -0.67
SHMT2-229ENST00000557348 TREM1Q9NP99 234 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms