RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 RBMY1A1P0DJD3 496 aaKnown RBP7.9□□□□□ -1.14
SYNE3-205ENST00000557275 RBMY1CP0DJD4 496 aa7.9□□□□□ -1.14
SYNE3-205ENST00000557275 MMP9P14780 707 aa7.9□□□□□ -1.14
SYNE3-205ENST00000557275 CD68P34810 354 aaPredicted RBP7.9□□□□□ -1.14
SYNE3-205ENST00000557275 PRSS8Q16651 343 aa7.9□□□□□ -1.14
SYNE3-205ENST00000557275 TEPPQ6URK8 271 aa7.9□□□□□ -1.14
SYNE3-205ENST00000557275 C19orf24Q9BVV8 132 aa7.9□□□□□ -1.14
SYNE3-205ENST00000557275 SLC25A22Q9H936 323 aa7.9□□□□□ -1.14
SYNE3-205ENST00000557275 BOLA1Q9Y3E2 137 aa7.9□□□□□ -1.14
SYNE3-205ENST00000557275 SNURFLB1AK76 121 aa7.9□□□□□ -1.14
SYNE3-205ENST00000557275 SLC25A17O43808 307 aa7.9□□□□□ -1.14
SYNE3-205ENST00000557275 PMELP40967 661 aa7.9□□□□□ -1.14
SYNE3-205ENST00000557275 SLC25A1P53007 311 aa7.9□□□□□ -1.14
SYNE3-205ENST00000557275 SELENOTP62341 195 aa7.9□□□□□ -1.14
SYNE3-205ENST00000557275 NTHL1P78549 312 aa7.9□□□□□ -1.14
SYNE3-205ENST00000557275 EIF3IQ13347 325 aaKnown RBP7.9□□□□□ -1.14
SYNE3-205ENST00000557275 PRSS45Q7RTY3 260 aa7.9□□□□□ -1.14
SYNE3-205ENST00000557275 LPAR5Q9H1C0 372 aa7.9□□□□□ -1.14
SYNE3-205ENST00000557275 WIPI2Q9Y4P8 454 aa7.9□□□□□ -1.14
SYNE3-205ENST00000557275 B3GALT4O96024 378 aa7.9□□□□□ -1.15
SYNE3-205ENST00000557275 HIST1H1DP16402 221 aaKnown RBP7.9□□□□□ -1.15
SYNE3-205ENST00000557275 DOK1Q99704 481 aa7.9□□□□□ -1.15
SYNE3-205ENST00000557275 VSIG4Q9Y279 399 aa7.9□□□□□ -1.15
SYNE3-205ENST00000557275 TMEM190Q8WZ59 177 aa7.9□□□□□ -1.15
SYNE3-205ENST00000557275 ABHD14BQ96IU4 210 aa7.9□□□□□ -1.15
SYNE3-205ENST00000557275 H7C1H1 209 aa7.9□□□□□ -1.15
SYNE3-205ENST00000557275 PYCARD-AS1I3L0S3 204 aa7.9□□□□□ -1.15
SYNE3-205ENST00000557275 DYNLRB2Q8TF09 96 aa7.9□□□□□ -1.15
SYNE3-205ENST00000557275 FGF21Q9NSA1 209 aa7.9□□□□□ -1.15
SYNE3-205ENST00000557275 HOXC4P09017 264 aaPredicted RBP7.9□□□□□ -1.15
SYNE3-205ENST00000557275 DEFB133Q30KQ1 61 aa7.9□□□□□ -1.15
SYNE3-205ENST00000557275 BTLAQ7Z6A9 289 aa7.9□□□□□ -1.15
SYNE3-205ENST00000557275 ZNF384Q8TF68 577 aa7.9□□□□□ -1.15
SYNE3-205ENST00000557275 RNF133Q8WVZ7 376 aa7.9□□□□□ -1.15
SYNE3-205ENST00000557275 ELF5Q9UKW6 265 aaPredicted RBP7.9□□□□□ -1.15
SYNE3-205ENST00000557275 KCNMB2Q9Y691 235 aa7.9□□□□□ -1.15
SYNE3-205ENST00000557275 C9orf170A2RU37 121 aa7.89□□□□□ -1.15
SYNE3-205ENST00000557275 TRGC1P0CF51 173 aa7.89□□□□□ -1.15
SYNE3-205ENST00000557275 S100A7L2Q5SY68 101 aa7.89□□□□□ -1.15
SYNE3-205ENST00000557275 FUT9Q9Y231 359 aa7.89□□□□□ -1.15
SYNE3-205ENST00000557275 KCNK7Q9Y2U2 307 aa7.89□□□□□ -1.15
SYNE3-205ENST00000557275 ZBTB42B2RXF5 422 aa7.89□□□□□ -1.15
SYNE3-205ENST00000557275 PPICP45877 212 aa7.89□□□□□ -1.15
SYNE3-205ENST00000557275 CCDC190Q86UF4 302 aa7.89□□□□□ -1.15
SYNE3-205ENST00000557275 DOT1LQ8TEK3 1739 aa7.89□□□□□ -1.15
SYNE3-205ENST00000557275 ZNF646O15015 1829 aaPredicted RBP7.89□□□□□ -1.15
SYNE3-205ENST00000557275 H3BRM9 83 aa7.89□□□□□ -1.15
SYNE3-205ENST00000557275 FAM53BQ14153 422 aa7.89□□□□□ -1.15
SYNE3-205ENST00000557275 GSG1Q2KHT4 349 aa7.89□□□□□ -1.15
SYNE3-205ENST00000557275 NOXO1Q8NFA2 376 aa7.89□□□□□ -1.15
SYNE3-205ENST00000557275 OR2K2Q8NGT1 345 aa7.89□□□□□ -1.15
SYNE3-205ENST00000557275 OR1F12Q8NHA8 337 aa7.89□□□□□ -1.15
SYNE3-205ENST00000557275 A4GNTQ9UNA3 340 aa7.89□□□□□ -1.15
SYNE3-205ENST00000557275 TMEM210A6NLX4 147 aa7.89□□□□□ -1.15
SYNE3-205ENST00000557275 OR51M1Q9H341 326 aa7.89□□□□□ -1.15
SYNE3-205ENST00000557275 ATF1P18846 271 aa7.89□□□□□ -1.15
SYNE3-205ENST00000557275 PFN4Q8NHR9 129 aa7.89□□□□□ -1.15
SYNE3-205ENST00000557275 PTX4Q96A99 478 aa7.89□□□□□ -1.15
SYNE3-205ENST00000557275 DOCK2Q92608 1830 aa7.89□□□□□ -1.15
SYNE3-205ENST00000557275 CDKN2AP42771 156 aaKnown RBP7.89□□□□□ -1.15
SYNE3-205ENST00000557275 CACNG4Q9UBN1 327 aa7.89□□□□□ -1.15
SYNE3-205ENST00000557275 KCNE5Q9UJ90 142 aa7.89□□□□□ -1.15
SYNE3-205ENST00000557275 RICTORQ6R327 1708 aa7.89□□□□□ -1.15
SYNE3-205ENST00000557275 SRSF10O75494 262 aaKnown RBP7.89□□□□□ -1.15
SYNE3-205ENST00000557275 CYB5R3P00387 301 aaPredicted RBP7.89□□□□□ -1.15
SYNE3-205ENST00000557275 SEC11BP0C7V7 166 aa7.89□□□□□ -1.15
SYNE3-205ENST00000557275 LIM2P55344 173 aa7.89□□□□□ -1.15
SYNE3-205ENST00000557275 NAAAQ02083 359 aa7.89□□□□□ -1.15
SYNE3-205ENST00000557275 FBXO46Q6PJ61 603 aaPredicted RBP7.89□□□□□ -1.15
SYNE3-205ENST00000557275 NPTNQ9Y639 398 aa7.89□□□□□ -1.15
SYNE3-205ENST00000557275 AKR7A3O95154 331 aa7.89□□□□□ -1.15
SYNE3-205ENST00000557275 CKS2P33552 79 aa7.89□□□□□ -1.15
SYNE3-205ENST00000557275 SLC37A1P57057 533 aa7.89□□□□□ -1.15
SYNE3-205ENST00000557275 RACK1P63244 317 aaKnown RBP7.89□□□□□ -1.15
SYNE3-205ENST00000557275 KCNMB1Q16558 191 aa7.89□□□□□ -1.15
SYNE3-205ENST00000557275 RARRES2Q99969 163 aa7.89□□□□□ -1.15
SYNE3-205ENST00000557275 AJAP1Q9UKB5 411 aaPredicted RBP7.89□□□□□ -1.15
SYNE3-205ENST00000557275 RGPD4Q7Z3J3 1758 aa7.89□□□□□ -1.15
SYNE3-205ENST00000557275 DCTDP32321 178 aa7.89□□□□□ -1.15
SYNE3-205ENST00000557275 SHISA6Q6ZSJ9 500 aa7.89□□□□□ -1.15
SYNE3-205ENST00000557275 RNF39Q9H2S5 420 aa7.89□□□□□ -1.15
SYNE3-205ENST00000557275 IKZF4Q9H2S9 585 aa7.89□□□□□ -1.15
SYNE3-205ENST00000557275 DDX60LQ5H9U9 1706 aaKnown RBP7.89□□□□□ -1.15
SYNE3-205ENST00000557275 ZNF98A6NK75 572 aa7.89□□□□□ -1.15
SYNE3-205ENST00000557275 SFT2D2O95562 160 aa7.89□□□□□ -1.15
SYNE3-205ENST00000557275 LRRC75BQ2VPJ9 315 aa7.89□□□□□ -1.15
SYNE3-205ENST00000557275 LYPD8Q6UX82 237 aa7.89□□□□□ -1.15
SYNE3-205ENST00000557275 LMO3Q8TAP4 145 aa7.89□□□□□ -1.15
SYNE3-205ENST00000557275 CXorf36Q9H7Y0 433 aa7.89□□□□□ -1.15
SYNE3-205ENST00000557275 DMRT1Q9Y5R6 373 aa7.89□□□□□ -1.15
SYNE3-205ENST00000557275 CSN3P07498 182 aa7.88□□□□□ -1.15
SYNE3-205ENST00000557275 LYZP61626 148 aa7.88□□□□□ -1.15
SYNE3-205ENST00000557275 LINC00303Q3SY05 128 aa7.88□□□□□ -1.15
SYNE3-205ENST00000557275 P2RX4Q99571 388 aa7.88□□□□□ -1.15
SYNE3-205ENST00000557275 FRG2CA6NGY1 282 aa7.88□□□□□ -1.15
SYNE3-205ENST00000557275 GABRA1P14867 456 aa7.88□□□□□ -1.15
SYNE3-205ENST00000557275 MORN1Q5T089 497 aa7.88□□□□□ -1.15
SYNE3-205ENST00000557275 TMEM108Q6UXF1 575 aa7.88□□□□□ -1.15
SYNE3-205ENST00000557275 OTOSQ8NHW6 89 aa7.88□□□□□ -1.15
SYNE3-205ENST00000557275 PHLDA1Q8WV24 401 aaPredicted RBP7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms