RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 ZNF44P15621 663 aa12.71□□□□□ -0.37
TUBB3-213ENST00000557262 CD24P25063 80 aa12.71□□□□□ -0.37
TUBB3-213ENST00000557262 CD34P28906 385 aa12.71□□□□□ -0.37
TUBB3-213ENST00000557262 CEACAM3P40198 252 aa12.71□□□□□ -0.37
TUBB3-213ENST00000557262 PRRX1P54821 245 aa12.71□□□□□ -0.37
TUBB3-213ENST00000557262 Q6P435 159 aa12.71□□□□□ -0.37
TUBB3-213ENST00000557262 CHST4Q8NCG5 386 aa12.71□□□□□ -0.37
TUBB3-213ENST00000557262 WFDC9Q8NEX5 89 aa12.71□□□□□ -0.37
TUBB3-213ENST00000557262 OR4D6Q8NGJ1 314 aa12.71□□□□□ -0.37
TUBB3-213ENST00000557262 OR5D18Q8NGL1 313 aa12.71□□□□□ -0.37
TUBB3-213ENST00000557262 PYDC1Q8WXC3 89 aa12.71□□□□□ -0.37
TUBB3-213ENST00000557262 CREB3L1Q96BA8 519 aa12.71□□□□□ -0.37
TUBB3-213ENST00000557262 C4orf36Q96KX1 117 aa12.71□□□□□ -0.37
TUBB3-213ENST00000557262 NECAP2Q9NVZ3 263 aa12.71□□□□□ -0.37
TUBB3-213ENST00000557262 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.71□□□□□ -0.37
TUBB3-213ENST00000557262 ODAMA1E959 279 aa12.7□□□□□ -0.38
TUBB3-213ENST00000557262 E9PQ18 207 aa12.7□□□□□ -0.38
TUBB3-213ENST00000557262 TOR1AO14656 332 aa12.7□□□□□ -0.38
TUBB3-213ENST00000557262 PIN1P1O15428 100 aa12.7□□□□□ -0.38
TUBB3-213ENST00000557262 RPSAP08865 295 aaKnown RBP12.7□□□□□ -0.38
TUBB3-213ENST00000557262 GDNFP39905 211 aa12.7□□□□□ -0.38
TUBB3-213ENST00000557262 LOXL3P58215 753 aa12.7□□□□□ -0.38
TUBB3-213ENST00000557262 GALEQ14376 348 aa12.7□□□□□ -0.38
TUBB3-213ENST00000557262 ZIK1Q3SY52 487 aaPredicted RBP12.7□□□□□ -0.38
TUBB3-213ENST00000557262 KRBOX4Q5JUW0 171 aa12.7□□□□□ -0.38
TUBB3-213ENST00000557262 LHFPL3Q86UP9 236 aa12.7□□□□□ -0.38
TUBB3-213ENST00000557262 SERPINA12Q8IW75 414 aa12.7□□□□□ -0.38
TUBB3-213ENST00000557262 OR5D14Q8NGL3 314 aa12.7□□□□□ -0.38
TUBB3-213ENST00000557262 MRAPQ8TCY5 172 aa12.7□□□□□ -0.38
TUBB3-213ENST00000557262 LGALS12Q96DT0 336 aa12.7□□□□□ -0.38
TUBB3-213ENST00000557262 RBM14Q96PK6 669 aaKnown RBP12.7□□□□□ -0.38
TUBB3-213ENST00000557262 SLC25A33Q9BSK2 321 aa12.7□□□□□ -0.38
TUBB3-213ENST00000557262 ZNF286AQ9HBT8 521 aa12.7□□□□□ -0.38
TUBB3-213ENST00000557262 MYRFQ9Y2G1 1151 aa12.7□□□□□ -0.38
TUBB3-213ENST00000557262 A0A087X0M5 115 aa12.69□□□□□ -0.38
TUBB3-213ENST00000557262 A0A1B0GX30 115 aa12.69□□□□□ -0.38
TUBB3-213ENST00000557262 A0A1W2PRX2 142 aa12.69□□□□□ -0.38
TUBB3-213ENST00000557262 FAM172BPA6NC97 362 aa12.69□□□□□ -0.38
TUBB3-213ENST00000557262 ZNF729A6NN14 1252 aaPredicted RBP12.69□□□□□ -0.38
TUBB3-213ENST00000557262 LY6LH3BQJ8 138 aa12.69□□□□□ -0.38
TUBB3-213ENST00000557262 BUB1B-PAK6H3BSN5 160 aa12.69□□□□□ -0.38
TUBB3-213ENST00000557262 SLC33A1O00400 549 aaPredicted RBP12.69□□□□□ -0.38
TUBB3-213ENST00000557262 EI24O14681 340 aa12.69□□□□□ -0.38
TUBB3-213ENST00000557262 OR2F2O95006 317 aa12.69□□□□□ -0.38
TUBB3-213ENST00000557262 TMEM225BP0DP42 221 aa12.69□□□□□ -0.38
TUBB3-213ENST00000557262 DBTP11182 482 aaKnown RBP12.69□□□□□ -0.38
TUBB3-213ENST00000557262 CD33P20138 364 aa12.69□□□□□ -0.38
TUBB3-213ENST00000557262 PTGFRP43088 359 aa12.69□□□□□ -0.38
TUBB3-213ENST00000557262 ALDH3A2P51648 485 aa12.69□□□□□ -0.38
TUBB3-213ENST00000557262 CDK5R1Q15078 307 aa12.69□□□□□ -0.38
TUBB3-213ENST00000557262 KISS1Q15726 138 aa12.69□□□□□ -0.38
TUBB3-213ENST00000557262 HLA-DRB5Q30154 266 aa12.69□□□□□ -0.38
TUBB3-213ENST00000557262 ABCA11PQ4W5N1 156 aa12.69□□□□□ -0.38
TUBB3-213ENST00000557262 KIAA2026Q5HYC2 2103 aa12.69□□□□□ -0.38
TUBB3-213ENST00000557262 SYS1Q8N2H4 156 aa12.69□□□□□ -0.38
TUBB3-213ENST00000557262 PHF21AQ96BD5 680 aa12.69□□□□□ -0.38
TUBB3-213ENST00000557262 COQ2Q96H96 371 aa12.69□□□□□ -0.38
TUBB3-213ENST00000557262 ING3Q9NXR8 418 aa12.69□□□□□ -0.38
TUBB3-213ENST00000557262 OR6C3Q9NZP0 311 aa12.69□□□□□ -0.38
TUBB3-213ENST00000557262 AASSQ9UDR5 926 aa12.69□□□□□ -0.38
TUBB3-213ENST00000557262 DNAH3Q8TD57 4116 aa12.69□□□□□ -0.38
TUBB3-213ENST00000557262 TCRBV4S1A1TA0A5B7 111 aa12.68□□□□□ -0.38
TUBB3-213ENST00000557262 OOSP1A8MZH6 123 aa12.68□□□□□ -0.38
TUBB3-213ENST00000557262 LPLP06858 475 aa12.68□□□□□ -0.38
TUBB3-213ENST00000557262 HCKP08631 526 aa12.68□□□□□ -0.38
TUBB3-213ENST00000557262 MNDAP41218 407 aa12.68□□□□□ -0.38
TUBB3-213ENST00000557262 ZP1P60852 638 aa12.68□□□□□ -0.38
TUBB3-213ENST00000557262 C17orf58Q2M2W7 97 aa12.68□□□□□ -0.38
TUBB3-213ENST00000557262 TCTEX1D4Q5JR98 221 aa12.68□□□□□ -0.38
TUBB3-213ENST00000557262 TPTE2P1Q5T6R2 138 aa12.68□□□□□ -0.38
TUBB3-213ENST00000557262 PARP16Q8N5Y8 322 aa12.68□□□□□ -0.38
TUBB3-213ENST00000557262 ZNF565Q8N9K5 539 aa12.68□□□□□ -0.38
TUBB3-213ENST00000557262 ALG8Q9BVK2 526 aa12.68□□□□□ -0.38
TUBB3-213ENST00000557262 ISG20L2Q9H9L3 353 aaKnown RBP12.68□□□□□ -0.38
TUBB3-213ENST00000557262 GMPPBQ9Y5P6 360 aa12.68□□□□□ -0.38
TUBB3-213ENST00000557262 TSSC4Q9Y5U2 329 aaPredicted RBP12.68□□□□□ -0.38
TUBB3-213ENST00000557262 KBTBD11-OT1A0A1B0GTJ5 212 aa12.67□□□□□ -0.38
TUBB3-213ENST00000557262 SULT1B1O43704 296 aa12.67□□□□□ -0.38
TUBB3-213ENST00000557262 ZFPL1O95159 310 aa12.67□□□□□ -0.38
TUBB3-213ENST00000557262 FADS2O95864 444 aaKnown RBP12.67□□□□□ -0.38
TUBB3-213ENST00000557262 AMY1AP04745 511 aa12.67□□□□□ -0.38
TUBB3-213ENST00000557262 AMY2AP04746 511 aa12.67□□□□□ -0.38
TUBB3-213ENST00000557262 CGB3P0DN86 165 aa12.67□□□□□ -0.38
TUBB3-213ENST00000557262 CGB7P0DN87 165 aa12.67□□□□□ -0.38
TUBB3-213ENST00000557262 PF4V1P10720 104 aa12.67□□□□□ -0.38
TUBB3-213ENST00000557262 GABRB1P18505 474 aa12.67□□□□□ -0.38
TUBB3-213ENST00000557262 MTNR1BP49286 362 aa12.67□□□□□ -0.38
TUBB3-213ENST00000557262 MRPL28Q13084 256 aaKnown RBP12.67□□□□□ -0.38
TUBB3-213ENST00000557262 ZNF691Q5VV52 312 aa12.67□□□□□ -0.38
TUBB3-213ENST00000557262 FOXB2Q5VYV0 432 aa12.67□□□□□ -0.38
TUBB3-213ENST00000557262 ELP2Q6IA86 826 aa12.67□□□□□ -0.38
TUBB3-213ENST00000557262 CCDC144NLQ6NUI1 221 aa12.67□□□□□ -0.38
TUBB3-213ENST00000557262 CCDC121Q6ZUS5 278 aa12.67□□□□□ -0.38
TUBB3-213ENST00000557262 OR9G1Q8NH87 305 aa12.67□□□□□ -0.38
TUBB3-213ENST00000557262 OR5AK2Q8NH90 309 aa12.67□□□□□ -0.38
TUBB3-213ENST00000557262 Q96MT0 163 aa12.67□□□□□ -0.38
TUBB3-213ENST00000557262 NCOR1P1Q9H4R4 102 aa12.67□□□□□ -0.38
TUBB3-213ENST00000557262 AURKAIP1Q9NWT8 199 aaPredicted RBP12.67□□□□□ -0.38
TUBB3-213ENST00000557262 TMEM212A6NML5 194 aa12.66□□□□□ -0.38
TUBB3-213ENST00000557262 H0YJX3 145 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms