RNA–Protein interactions for RNA: ENST00000556909.1

VIPAS39-209, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-209ENST00000556909 HSPE1-MOB4S4R3N1 261 aa14.53□□□□□ -0.08
VIPAS39-209ENST00000556909 PSMB11A5LHX3 300 aa14.52□□□□□ -0.09
VIPAS39-209ENST00000556909 KDM4BO94953 1096 aa14.52□□□□□ -0.09
VIPAS39-209ENST00000556909 CSN2P05814 226 aa14.52□□□□□ -0.09
VIPAS39-209ENST00000556909 ZNF20P17024 532 aa14.52□□□□□ -0.09
VIPAS39-209ENST00000556909 ATP6V1E1P36543 226 aa14.52□□□□□ -0.09
VIPAS39-209ENST00000556909 MNDAP41218 407 aa14.52□□□□□ -0.09
VIPAS39-209ENST00000556909 OR3A4PP47883 348 aa14.52□□□□□ -0.09
VIPAS39-209ENST00000556909 RBM39Q14498 530 aaKnown RBP14.52□□□□□ -0.09
VIPAS39-209ENST00000556909 CCDC144NLQ6NUI1 221 aa14.52□□□□□ -0.09
VIPAS39-209ENST00000556909 MRPL41Q8IXM3 137 aaKnown RBP14.52□□□□□ -0.09
VIPAS39-209ENST00000556909 OR4D6Q8NGJ1 314 aa14.52□□□□□ -0.09
VIPAS39-209ENST00000556909 OR2G2Q8NGZ5 317 aa14.52□□□□□ -0.09
VIPAS39-209ENST00000556909 DPF1Q92782 380 aa14.52□□□□□ -0.09
VIPAS39-209ENST00000556909 SLC7A6OSQ96CW6 309 aaPredicted RBP14.52□□□□□ -0.09
VIPAS39-209ENST00000556909 COQ2Q96H96 371 aa14.52□□□□□ -0.09
VIPAS39-209ENST00000556909 MBOAT4Q96T53 435 aa14.52□□□□□ -0.09
VIPAS39-209ENST00000556909 CIB1Q99828 191 aa14.52□□□□□ -0.09
VIPAS39-209ENST00000556909 ZNF649Q9BS31 505 aa14.52□□□□□ -0.09
VIPAS39-209ENST00000556909 GPR61Q9BZJ8 451 aa14.52□□□□□ -0.09
VIPAS39-209ENST00000556909 ENOPH1Q9UHY7 261 aa14.52□□□□□ -0.09
VIPAS39-209ENST00000556909 OOSP1A8MZH6 123 aa14.51□□□□□ -0.09
VIPAS39-209ENST00000556909 E9PQ18 207 aa14.51□□□□□ -0.09
VIPAS39-209ENST00000556909 ZNF44P15621 663 aa14.51□□□□□ -0.09
VIPAS39-209ENST00000556909 POLR2IP36954 125 aaKnown RBP14.51□□□□□ -0.09
VIPAS39-209ENST00000556909 CD69Q07108 199 aa14.51□□□□□ -0.09
VIPAS39-209ENST00000556909 ATXN7L3Q14CW9 347 aaPredicted RBP14.51□□□□□ -0.09
VIPAS39-209ENST00000556909 C17orf58Q2M2W7 97 aa14.51□□□□□ -0.09
VIPAS39-209ENST00000556909 KRBOX4Q5JUW0 171 aa14.51□□□□□ -0.09
VIPAS39-209ENST00000556909 TMEM244Q5VVB8 128 aa14.51□□□□□ -0.09
VIPAS39-209ENST00000556909 RNF144BQ7Z419 303 aa14.51□□□□□ -0.09
VIPAS39-209ENST00000556909 ZDHHC13Q8IUH4 622 aa14.51□□□□□ -0.09
VIPAS39-209ENST00000556909 OR51D1Q8NGF3 324 aa14.51□□□□□ -0.09
VIPAS39-209ENST00000556909 OR5D18Q8NGL1 313 aa14.51□□□□□ -0.09
VIPAS39-209ENST00000556909 EME1Q96AY2 570 aa14.51□□□□□ -0.09
VIPAS39-209ENST00000556909 SPACA5Q96QH8 159 aa14.51□□□□□ -0.09
VIPAS39-209ENST00000556909 B9D2Q9BPU9 175 aa14.51□□□□□ -0.09
VIPAS39-209ENST00000556909 ING3Q9NXR8 418 aa14.51□□□□□ -0.09
VIPAS39-209ENST00000556909 ZNF729A6NN14 1252 aaPredicted RBP14.5□□□□□ -0.09
VIPAS39-209ENST00000556909 SLC33A1O00400 549 aaPredicted RBP14.5□□□□□ -0.09
VIPAS39-209ENST00000556909 ISG15P05161 165 aa14.5□□□□□ -0.09
VIPAS39-209ENST00000556909 VSIG8P0DPA2 414 aa14.5□□□□□ -0.09
VIPAS39-209ENST00000556909 THBS3P49746 956 aa14.5□□□□□ -0.09
VIPAS39-209ENST00000556909 PRRX1P54821 245 aa14.5□□□□□ -0.09
VIPAS39-209ENST00000556909 NANOS3P60323 173 aaKnown RBP14.5□□□□□ -0.09
VIPAS39-209ENST00000556909 RPL23AP62750 156 aaKnown RBP14.5□□□□□ -0.09
VIPAS39-209ENST00000556909 SCN1BQ07699 218 aa14.5□□□□□ -0.09
VIPAS39-209ENST00000556909 TMED1Q13445 227 aa14.5□□□□□ -0.09
VIPAS39-209ENST00000556909 Q6P435 159 aa14.5□□□□□ -0.09
VIPAS39-209ENST00000556909 ZNF329Q86UD4 541 aa14.5□□□□□ -0.09
VIPAS39-209ENST00000556909 CHST4Q8NCG5 386 aa14.5□□□□□ -0.09
VIPAS39-209ENST00000556909 OR8J1Q8NGP2 316 aa14.5□□□□□ -0.09
VIPAS39-209ENST00000556909 GABARAPL3Q9BY60 117 aa14.5□□□□□ -0.09
VIPAS39-209ENST00000556909 PPIL3Q9H2H8 161 aaKnown RBP14.5□□□□□ -0.09
VIPAS39-209ENST00000556909 FRRS1LQ9P0K9 344 aa14.5□□□□□ -0.09
VIPAS39-209ENST00000556909 SNRNP70P08621 437 aaKnown RBP14.49□□□□□ -0.09
VIPAS39-209ENST00000556909 OCM2P0CE71 109 aa14.49□□□□□ -0.09
VIPAS39-209ENST00000556909 OCMP0CE72 109 aaPredicted RBP14.49□□□□□ -0.09
VIPAS39-209ENST00000556909 FAM106CPP0CH98 169 aa14.49□□□□□ -0.09
VIPAS39-209ENST00000556909 NFYBP25208 207 aa14.49□□□□□ -0.09
VIPAS39-209ENST00000556909 OR51A4Q8NGJ6 313 aa14.49□□□□□ -0.09
VIPAS39-209ENST00000556909 OR13C9Q8NGT0 318 aa14.49□□□□□ -0.09
VIPAS39-209ENST00000556909 OR10AC1Q8NH08 325 aa14.49□□□□□ -0.09
VIPAS39-209ENST00000556909 OR56B4Q8NH76 319 aa14.49□□□□□ -0.09
VIPAS39-209ENST00000556909 OR9G1Q8NH87 305 aa14.49□□□□□ -0.09
VIPAS39-209ENST00000556909 RFKQ969G6 155 aa14.49□□□□□ -0.09
VIPAS39-209ENST00000556909 TOMM40LQ969M1 308 aa14.49□□□□□ -0.09
VIPAS39-209ENST00000556909 RPEQ96AT9 228 aa14.49□□□□□ -0.09
VIPAS39-209ENST00000556909 KIRREL1Q96J84 757 aa14.49□□□□□ -0.09
VIPAS39-209ENST00000556909 WWC2-AS2Q96NR7 200 aa14.49□□□□□ -0.09
VIPAS39-209ENST00000556909 RHOFQ9HBH0 211 aa14.49□□□□□ -0.09
VIPAS39-209ENST00000556909 NEK6Q9HC98 313 aa14.49□□□□□ -0.09
VIPAS39-209ENST00000556909 FAM90A18PA6NE21 464 aa14.48□□□□□ -0.09
VIPAS39-209ENST00000556909 FAM90A16PA6NEW6 464 aa14.48□□□□□ -0.09
VIPAS39-209ENST00000556909 FAM90A20PA6NIJ5 464 aa14.48□□□□□ -0.09
VIPAS39-209ENST00000556909 FAM90A9PA6NNJ1 464 aa14.48□□□□□ -0.09
VIPAS39-209ENST00000556909 FAM90A12PA8MX19 464 aa14.48□□□□□ -0.09
VIPAS39-209ENST00000556909 FAM90A5PA8MXJ8 464 aa14.48□□□□□ -0.09
VIPAS39-209ENST00000556909 MT-ND2P03891 347 aa14.48□□□□□ -0.09
VIPAS39-209ENST00000556909 FAM90A15PP0C7V4 464 aa14.48□□□□□ -0.09
VIPAS39-209ENST00000556909 FAM90A13PP0C7W8 464 aa14.48□□□□□ -0.09
VIPAS39-209ENST00000556909 FAM90A14PP0C7W9 464 aa14.48□□□□□ -0.09
VIPAS39-209ENST00000556909 FAM90A24PP0C7X0 464 aa14.48□□□□□ -0.09
VIPAS39-209ENST00000556909 FASP25445 335 aa14.48□□□□□ -0.09
VIPAS39-209ENST00000556909 FDX2Q6P4F2 183 aa14.48□□□□□ -0.09
VIPAS39-209ENST00000556909 C18orf65Q6ZTR6 163 aa14.48□□□□□ -0.09
VIPAS39-209ENST00000556909 C8orf86Q6ZUL3 223 aa14.48□□□□□ -0.09
VIPAS39-209ENST00000556909 OR2W3Q7Z3T1 314 aa14.48□□□□□ -0.09
VIPAS39-209ENST00000556909 AMIGO2Q86SJ2 522 aa14.48□□□□□ -0.09
VIPAS39-209ENST00000556909 SAXO1Q8IYX7 474 aa14.48□□□□□ -0.09
VIPAS39-209ENST00000556909 NOL4LQ96MY1 436 aaPredicted RBP14.48□□□□□ -0.09
VIPAS39-209ENST00000556909 RIBC2Q9H4K1 309 aa14.48□□□□□ -0.09
VIPAS39-209ENST00000556909 PCDHB16Q9NRJ7 776 aa14.48□□□□□ -0.09
VIPAS39-209ENST00000556909 OR6C3Q9NZP0 311 aa14.48□□□□□ -0.09
VIPAS39-209ENST00000556909 AMMECR1Q9Y4X0 333 aaPredicted RBP14.48□□□□□ -0.09
VIPAS39-209ENST00000556909 KBTBD11-OT1A0A1B0GTJ5 212 aa14.47□□□□□ -0.09
VIPAS39-209ENST00000556909 A0A1W2PPI3 338 aa14.47□□□□□ -0.09
VIPAS39-209ENST00000556909 CCDC159P0C7I6 412 aa14.47□□□□□ -0.09
VIPAS39-209ENST00000556909 GLP1RP43220 463 aa14.47□□□□□ -0.09
VIPAS39-209ENST00000556909 CDK5R1Q15078 307 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms