RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 MT-ND2P03891 347 aa5.97□□□□□ -1.45
SCFD1-222ENST00000556768 ARG1P05089 322 aa5.97□□□□□ -1.45
SCFD1-222ENST00000556768 TMEM225BP0DP42 221 aa5.97□□□□□ -1.45
SCFD1-222ENST00000556768 CCL3L1P16619 93 aa5.97□□□□□ -1.45
SCFD1-222ENST00000556768 GABRA5P31644 462 aa5.97□□□□□ -1.45
SCFD1-222ENST00000556768 BMXP51813 675 aa5.97□□□□□ -1.45
SCFD1-222ENST00000556768 NANOS3P60323 173 aaKnown RBP5.97□□□□□ -1.45
SCFD1-222ENST00000556768 SCN1BQ07699 218 aa5.97□□□□□ -1.45
SCFD1-222ENST00000556768 ZNF146Q15072 292 aa5.97□□□□□ -1.45
SCFD1-222ENST00000556768 CCDC58Q4VC31 144 aa5.97□□□□□ -1.45
SCFD1-222ENST00000556768 LPCAT4Q643R3 524 aa5.97□□□□□ -1.45
SCFD1-222ENST00000556768 OR52W1Q6IF63 320 aa5.97□□□□□ -1.45
SCFD1-222ENST00000556768 C11orf88Q6PI97 169 aa5.97□□□□□ -1.45
SCFD1-222ENST00000556768 ZNF782Q6ZMW2 699 aaPredicted RBP5.97□□□□□ -1.45
SCFD1-222ENST00000556768 SETD9Q8NE22 299 aa5.97□□□□□ -1.45
SCFD1-222ENST00000556768 OR4C13Q8NGP0 309 aa5.97□□□□□ -1.45
SCFD1-222ENST00000556768 OR13C9Q8NGT0 318 aa5.97□□□□□ -1.45
SCFD1-222ENST00000556768 MALSU1Q96EH3 234 aa5.97□□□□□ -1.45
SCFD1-222ENST00000556768 GPER1Q99527 375 aa5.97□□□□□ -1.45
SCFD1-222ENST00000556768 S100A13Q99584 98 aa5.97□□□□□ -1.45
SCFD1-222ENST00000556768 SLC29A1Q99808 456 aa5.97□□□□□ -1.45
SCFD1-222ENST00000556768 CDCA4Q9BXL8 241 aa5.97□□□□□ -1.45
SCFD1-222ENST00000556768 GAL3ST2Q9H3Q3 398 aa5.97□□□□□ -1.45
SCFD1-222ENST00000556768 EXOSC4Q9NPD3 245 aaKnown RBP5.97□□□□□ -1.45
SCFD1-222ENST00000556768 RBFOX1Q9NWB1 397 aaKnown RBP5.97□□□□□ -1.45
SCFD1-222ENST00000556768 MYRFQ9Y2G1 1151 aa5.97□□□□□ -1.45
SCFD1-222ENST00000556768 GSTK1Q9Y2Q3 226 aa5.97□□□□□ -1.45
SCFD1-222ENST00000556768 LINC00312Q9Y6C7 94 aa5.97□□□□□ -1.45
SCFD1-222ENST00000556768 IGKV1-9A0A0C4DH69 117 aa5.96□□□□□ -1.46
SCFD1-222ENST00000556768 OR4C45A6NMZ5 311 aa5.96□□□□□ -1.46
SCFD1-222ENST00000556768 C17orf98A8MV24 154 aa5.96□□□□□ -1.46
SCFD1-222ENST00000556768 F8VVB4 439 aa5.96□□□□□ -1.46
SCFD1-222ENST00000556768 F8VWA3 439 aa5.96□□□□□ -1.46
SCFD1-222ENST00000556768 SULT1B1O43704 296 aa5.96□□□□□ -1.46
SCFD1-222ENST00000556768 ZNF737O75373 536 aa5.96□□□□□ -1.46
SCFD1-222ENST00000556768 TSPAN9O75954 239 aa5.96□□□□□ -1.46
SCFD1-222ENST00000556768 ZFPL1O95159 310 aa5.96□□□□□ -1.46
SCFD1-222ENST00000556768 IGHA1P01876 353 aa5.96□□□□□ -1.46
SCFD1-222ENST00000556768 IGHV1-8P0DP01 117 aa5.96□□□□□ -1.46
SCFD1-222ENST00000556768 ZNF44P15621 663 aa5.96□□□□□ -1.46
SCFD1-222ENST00000556768 RAB3AP20336 220 aa5.96□□□□□ -1.46
SCFD1-222ENST00000556768 BCL3P20749 454 aa5.96□□□□□ -1.46
SCFD1-222ENST00000556768 DUSP1P28562 367 aa5.96□□□□□ -1.46
SCFD1-222ENST00000556768 NPBWR2P48146 333 aa5.96□□□□□ -1.46
SCFD1-222ENST00000556768 SNU13P55769 128 aaKnown RBP5.96□□□□□ -1.46
SCFD1-222ENST00000556768 IL18R1Q13478 541 aa5.96□□□□□ -1.46
SCFD1-222ENST00000556768 ZNF273Q14593 569 aa5.96□□□□□ -1.46
SCFD1-222ENST00000556768 KISS1Q15726 138 aa5.96□□□□□ -1.46
SCFD1-222ENST00000556768 LRRC36Q1X8D7 754 aa5.96□□□□□ -1.46
SCFD1-222ENST00000556768 SLC35E4Q6ICL7 350 aa5.96□□□□□ -1.46
SCFD1-222ENST00000556768 SATL1Q86VE3 508 aa5.96□□□□□ -1.46
SCFD1-222ENST00000556768 SAXO1Q8IYX7 474 aa5.96□□□□□ -1.46
SCFD1-222ENST00000556768 ZNF565Q8N9K5 539 aa5.96□□□□□ -1.46
SCFD1-222ENST00000556768 CHST4Q8NCG5 386 aa5.96□□□□□ -1.46
SCFD1-222ENST00000556768 OR51A4Q8NGJ6 313 aa5.96□□□□□ -1.46
SCFD1-222ENST00000556768 OR52I1Q8NGK6 324 aa5.96□□□□□ -1.46
SCFD1-222ENST00000556768 OR2T6Q8NHC8 308 aa5.96□□□□□ -1.46
SCFD1-222ENST00000556768 RPS4Y2Q8TD47 263 aa5.96□□□□□ -1.46
SCFD1-222ENST00000556768 GPR148Q8TDV2 347 aa5.96□□□□□ -1.46
SCFD1-222ENST00000556768 CYGBQ8WWM9 190 aa5.96□□□□□ -1.46
SCFD1-222ENST00000556768 RFT1Q96AA3 541 aa5.96□□□□□ -1.46
SCFD1-222ENST00000556768 NPFFR1Q9GZQ6 430 aa5.96□□□□□ -1.46
SCFD1-222ENST00000556768 CHST6Q9GZX3 395 aa5.96□□□□□ -1.46
SCFD1-222ENST00000556768 VCXQ9H320 206 aa5.96□□□□□ -1.46
SCFD1-222ENST00000556768 C16orf95Q9H693 158 aa5.96□□□□□ -1.46
SCFD1-222ENST00000556768 ISG20L2Q9H9L3 353 aaKnown RBP5.96□□□□□ -1.46
SCFD1-222ENST00000556768 HMG20AQ9NP66 347 aa5.96□□□□□ -1.46
SCFD1-222ENST00000556768 PCDHB16Q9NRJ7 776 aa5.96□□□□□ -1.46
SCFD1-222ENST00000556768 MRPS18AQ9NVS2 196 aaKnown RBP5.96□□□□□ -1.46
SCFD1-222ENST00000556768 AASSQ9UDR5 926 aa5.96□□□□□ -1.46
SCFD1-222ENST00000556768 TBL2Q9Y4P3 447 aaKnown RBP5.96□□□□□ -1.46
SCFD1-222ENST00000556768 PRSS47A8MTI9 375 aa5.95□□□□□ -1.46
SCFD1-222ENST00000556768 DEGS1O15121 323 aa5.95□□□□□ -1.46
SCFD1-222ENST00000556768 CLPXO76031 633 aa5.95□□□□□ -1.46
SCFD1-222ENST00000556768 GABRB1P18505 474 aa5.95□□□□□ -1.46
SCFD1-222ENST00000556768 ERP29P30040 261 aaKnown RBP5.95□□□□□ -1.46
SCFD1-222ENST00000556768 P2RX3P56373 397 aa5.95□□□□□ -1.46
SCFD1-222ENST00000556768 PPP3R1P63098 170 aa5.95□□□□□ -1.46
SCFD1-222ENST00000556768 FAM189A2Q15884 450 aa5.95□□□□□ -1.46
SCFD1-222ENST00000556768 SSX2Q16385 188 aa5.95□□□□□ -1.46
SCFD1-222ENST00000556768 LY6EQ16553 131 aa5.95□□□□□ -1.46
SCFD1-222ENST00000556768 RPL22L1Q6P5R6 122 aaKnown RBP5.95□□□□□ -1.46
SCFD1-222ENST00000556768 Q6ZSV7 163 aa5.95□□□□□ -1.46
SCFD1-222ENST00000556768 Q6ZTK2 550 aa5.95□□□□□ -1.46
SCFD1-222ENST00000556768 PARP16Q8N5Y8 322 aa5.95□□□□□ -1.46
SCFD1-222ENST00000556768 PACRGLQ8N7B6 248 aa5.95□□□□□ -1.46
SCFD1-222ENST00000556768 OR5D18Q8NGL1 313 aa5.95□□□□□ -1.46
SCFD1-222ENST00000556768 NDNFQ8TB73 568 aa5.95□□□□□ -1.46
SCFD1-222ENST00000556768 CAPSLQ8WWF8 208 aa5.95□□□□□ -1.46
SCFD1-222ENST00000556768 CREB3L1Q96BA8 519 aa5.95□□□□□ -1.46
SCFD1-222ENST00000556768 SPACA5Q96QH8 159 aa5.95□□□□□ -1.46
SCFD1-222ENST00000556768 CITED1Q99966 193 aa5.95□□□□□ -1.46
SCFD1-222ENST00000556768 PDCD1LG2Q9BQ51 273 aa5.95□□□□□ -1.46
SCFD1-222ENST00000556768 BARHL1Q9BZE3 327 aa5.95□□□□□ -1.46
SCFD1-222ENST00000556768 PAK1IP1Q9NWT1 392 aaPredicted RBP5.95□□□□□ -1.46
SCFD1-222ENST00000556768 CKLFQ9UBR5 152 aa5.95□□□□□ -1.46
SCFD1-222ENST00000556768 UBE2J1Q9Y385 318 aaPredicted RBP5.95□□□□□ -1.46
SCFD1-222ENST00000556768 VGLL3A8MV65 326 aa5.95□□□□□ -1.46
SCFD1-222ENST00000556768 E9PQ18 207 aa5.95□□□□□ -1.46
SCFD1-222ENST00000556768 SIRPB1O00241 398 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms