RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 NARFLQ9H6Q4 476 aa8.63□□□□□ -1.03
TMEM260-211ENST00000556648 LUZP4Q9P127 313 aa8.63□□□□□ -1.03
TMEM260-211ENST00000556648 TMA7Q9Y2S6 64 aaKnown RBP8.63□□□□□ -1.03
TMEM260-211ENST00000556648 TRAV39A0A0B4J263 110 aa8.62□□□□□ -1.03
TMEM260-211ENST00000556648 IGKV1D-13A0A0B4J2D9 117 aa8.62□□□□□ -1.03
TMEM260-211ENST00000556648 K7EM74 188 aa8.62□□□□□ -1.03
TMEM260-211ENST00000556648 SCGB1D2O95969 90 aa8.62□□□□□ -1.03
TMEM260-211ENST00000556648 IGKV1-13P0DP09 117 aa8.62□□□□□ -1.03
TMEM260-211ENST00000556648 GLP1RP43220 463 aa8.62□□□□□ -1.03
TMEM260-211ENST00000556648 HERV-K104P61576 105 aa8.62□□□□□ -1.03
TMEM260-211ENST00000556648 IL24Q13007 206 aa8.62□□□□□ -1.03
TMEM260-211ENST00000556648 MPV17LQ2QL34 196 aa8.62□□□□□ -1.03
TMEM260-211ENST00000556648 OR2A2Q6IF42 318 aa8.62□□□□□ -1.03
TMEM260-211ENST00000556648 ZNF585AQ6P3V2 769 aa8.62□□□□□ -1.03
TMEM260-211ENST00000556648 FBXW12Q6X9E4 464 aa8.62□□□□□ -1.03
TMEM260-211ENST00000556648 SEM1Q6ZVN7 128 aa8.62□□□□□ -1.03
TMEM260-211ENST00000556648 LYZL2Q7Z4W2 148 aa8.62□□□□□ -1.03
TMEM260-211ENST00000556648 ZNF573Q86YE8 665 aa8.62□□□□□ -1.03
TMEM260-211ENST00000556648 FAM58AQ8N1B3 248 aa8.62□□□□□ -1.03
TMEM260-211ENST00000556648 MARVELD3Q96A59 401 aa8.62□□□□□ -1.03
TMEM260-211ENST00000556648 TP53RKQ96S44 253 aa8.62□□□□□ -1.03
TMEM260-211ENST00000556648 OPN3Q9H1Y3 402 aaPredicted RBP8.62□□□□□ -1.03
TMEM260-211ENST00000556648 GLRX2Q9NS18 164 aa8.62□□□□□ -1.03
TMEM260-211ENST00000556648 ASPMQ8IZT6 3477 aa8.62□□□□□ -1.03
TMEM260-211ENST00000556648 FAM186AA6NE01 2351 aa8.62□□□□□ -1.03
TMEM260-211ENST00000556648 SHANK1Q9Y566 2161 aa8.61□□□□□ -1.03
TMEM260-211ENST00000556648 J3QT63 122 aa8.61□□□□□ -1.03
TMEM260-211ENST00000556648 SHOXO15266 292 aa8.61□□□□□ -1.03
TMEM260-211ENST00000556648 COX5AP20674 150 aa8.61□□□□□ -1.03
TMEM260-211ENST00000556648 TGFBR3Q03167 851 aa8.61□□□□□ -1.03
TMEM260-211ENST00000556648 LDLRAD3Q86YD5 345 aa8.61□□□□□ -1.03
TMEM260-211ENST00000556648 SLC38A6Q8IZM9 456 aa8.61□□□□□ -1.03
TMEM260-211ENST00000556648 OR1J1Q8NGS3 322 aa8.61□□□□□ -1.03
TMEM260-211ENST00000556648 MSI2Q96DH6 328 aaKnown RBP8.61□□□□□ -1.03
TMEM260-211ENST00000556648 C18orf12Q96KH6 178 aa8.61□□□□□ -1.03
TMEM260-211ENST00000556648 DHRS9Q9BPW9 319 aa8.61□□□□□ -1.03
TMEM260-211ENST00000556648 ADAT1Q9BUB4 502 aaKnown RBP8.61□□□□□ -1.03
TMEM260-211ENST00000556648 SLC25A32Q9H2D1 315 aa8.61□□□□□ -1.03
TMEM260-211ENST00000556648 BARX1Q9HBU1 254 aaPredicted RBP8.61□□□□□ -1.03
TMEM260-211ENST00000556648 MED9Q9NWA0 146 aa8.61□□□□□ -1.03
TMEM260-211ENST00000556648 DKK4Q9UBT3 224 aa8.61□□□□□ -1.03
TMEM260-211ENST00000556648 PFDN2Q9UHV9 154 aa8.61□□□□□ -1.03
TMEM260-211ENST00000556648 FZR1Q9UM11 496 aa8.61□□□□□ -1.03
TMEM260-211ENST00000556648 LSM5Q9Y4Y9 91 aaKnown RBP8.61□□□□□ -1.03
TMEM260-211ENST00000556648 SIGLEC5O15389 551 aa8.61□□□□□ -1.03
TMEM260-211ENST00000556648 PHF1O43189 567 aaPredicted RBP8.61□□□□□ -1.03
TMEM260-211ENST00000556648 UCP3P55916 312 aa8.61□□□□□ -1.03
TMEM260-211ENST00000556648 PSG7Q13046 419 aa8.61□□□□□ -1.03
TMEM260-211ENST00000556648 SNTB1Q13884 538 aaKnown RBP8.61□□□□□ -1.03
TMEM260-211ENST00000556648 ZNF169Q14929 603 aaPredicted RBP8.61□□□□□ -1.03
TMEM260-211ENST00000556648 PLEKHN1Q494U1 663 aaPredicted RBP8.61□□□□□ -1.03
TMEM260-211ENST00000556648 Q6P435 159 aa8.61□□□□□ -1.03
TMEM260-211ENST00000556648 LIAT1Q6ZQX7 453 aa8.61□□□□□ -1.03
TMEM260-211ENST00000556648 CXorf67Q86X51 503 aaPredicted RBP8.61□□□□□ -1.03
TMEM260-211ENST00000556648 RPRMLQ8N4K4 120 aa8.61□□□□□ -1.03
TMEM260-211ENST00000556648 BOLLQ8N9W6 283 aaKnown RBP8.61□□□□□ -1.03
TMEM260-211ENST00000556648 ZNF610Q8N9Z0 462 aa8.61□□□□□ -1.03
TMEM260-211ENST00000556648 SCCPDHQ8NBX0 429 aa8.61□□□□□ -1.03
TMEM260-211ENST00000556648 SECTM1Q8WVN6 248 aa8.61□□□□□ -1.03
TMEM260-211ENST00000556648 WNT2BQ93097 391 aa8.61□□□□□ -1.03
TMEM260-211ENST00000556648 SARAFQ96BY9 339 aa8.61□□□□□ -1.03
TMEM260-211ENST00000556648 GALNT14Q96FL9 552 aa8.61□□□□□ -1.03
TMEM260-211ENST00000556648 BSCL2Q96G97 398 aaPredicted RBP8.61□□□□□ -1.03
TMEM260-211ENST00000556648 CNTNAP3BQ96NU0 1288 aa8.61□□□□□ -1.03
TMEM260-211ENST00000556648 AQP10Q96PS8 301 aa8.61□□□□□ -1.03
TMEM260-211ENST00000556648 RTL8AQ9BWD3 113 aa8.61□□□□□ -1.03
TMEM260-211ENST00000556648 CNTNAP3Q9BZ76 1288 aa8.61□□□□□ -1.03
TMEM260-211ENST00000556648 PKIBQ9C010 78 aa8.61□□□□□ -1.03
TMEM260-211ENST00000556648 SLC5A7Q9GZV3 580 aa8.61□□□□□ -1.03
TMEM260-211ENST00000556648 COQ3Q9NZJ6 369 aa8.61□□□□□ -1.03
TMEM260-211ENST00000556648 TUBD1Q9UJT1 453 aa8.61□□□□□ -1.03
TMEM260-211ENST00000556648 FRYQ5TBA9 3013 aa8.6□□□□□ -1.03
TMEM260-211ENST00000556648 TRDCB7Z8K6 153 aa8.6□□□□□ -1.03
TMEM260-211ENST00000556648 SIRPB1O00241 398 aa8.6□□□□□ -1.03
TMEM260-211ENST00000556648 TNFSF13O75888 250 aa8.6□□□□□ -1.03
TMEM260-211ENST00000556648 DIRAS3O95661 229 aa8.6□□□□□ -1.03
TMEM260-211ENST00000556648 CRYZL1O95825 349 aa8.6□□□□□ -1.03
TMEM260-211ENST00000556648 TFF1P04155 84 aa8.6□□□□□ -1.03
TMEM260-211ENST00000556648 FGF2P09038 288 aa8.6□□□□□ -1.03
TMEM260-211ENST00000556648 HKR1P10072 659 aa8.6□□□□□ -1.03
TMEM260-211ENST00000556648 RCC1P18754 421 aaPredicted RBP8.6□□□□□ -1.03
TMEM260-211ENST00000556648 GNRHRP30968 328 aa8.6□□□□□ -1.03
TMEM260-211ENST00000556648 CEBPDP49716 269 aaPredicted RBP8.6□□□□□ -1.03
TMEM260-211ENST00000556648 UCP2P55851 309 aa8.6□□□□□ -1.03
TMEM260-211ENST00000556648 ZNF154Q13106 437 aa8.6□□□□□ -1.03
TMEM260-211ENST00000556648 INO80CQ6PI98 192 aaPredicted RBP8.6□□□□□ -1.03
TMEM260-211ENST00000556648 CLEC9AQ6UXN8 241 aa8.6□□□□□ -1.03
TMEM260-211ENST00000556648 MEX3BQ6ZN04 569 aaKnown RBP8.6□□□□□ -1.03
TMEM260-211ENST00000556648 Q6ZS49 121 aa8.6□□□□□ -1.03
TMEM260-211ENST00000556648 GALNT11Q8NCW6 608 aa8.6□□□□□ -1.03
TMEM260-211ENST00000556648 OR52M1Q8NGK5 317 aa8.6□□□□□ -1.03
TMEM260-211ENST00000556648 STOML3Q8TAV4 291 aa8.6□□□□□ -1.03
TMEM260-211ENST00000556648 PLPPR1Q8TBJ4 325 aa8.6□□□□□ -1.03
TMEM260-211ENST00000556648 GLYATL2Q8WU03 294 aa8.6□□□□□ -1.03
TMEM260-211ENST00000556648 POM121Q96HA1 1249 aa8.6□□□□□ -1.03
TMEM260-211ENST00000556648 LRP5LA4QPB2 252 aa8.59□□□□□ -1.03
TMEM260-211ENST00000556648 A8MXK9 166 aa8.59□□□□□ -1.03
TMEM260-211ENST00000556648 CDIPTO14735 213 aa8.59□□□□□ -1.03
TMEM260-211ENST00000556648 HSD17B6O14756 317 aa8.59□□□□□ -1.03
TMEM260-211ENST00000556648 WDR1O75083 606 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms