RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 PAK1IP1Q9NWT1 392 aaPredicted RBP9.42□□□□□ -0.9
SLIRP-205ENST00000556310 ZNRD1Q9P1U0 126 aa9.42□□□□□ -0.9
SLIRP-205ENST00000556310 SF3B6Q9Y3B4 125 aaKnown RBP9.42□□□□□ -0.9
SLIRP-205ENST00000556310 TPRKBQ9Y3C4 175 aa9.42□□□□□ -0.9
SLIRP-205ENST00000556310 LINC00312Q9Y6C7 94 aa9.42□□□□□ -0.9
SLIRP-205ENST00000556310 TRBV5-7A0A0A0MS05 114 aa9.41□□□□□ -0.9
SLIRP-205ENST00000556310 A0A1W2PRD5 423 aa9.41□□□□□ -0.9
SLIRP-205ENST00000556310 A0A1W2PRF3 423 aa9.41□□□□□ -0.9
SLIRP-205ENST00000556310 A0A1W2PRM7 423 aa9.41□□□□□ -0.9
SLIRP-205ENST00000556310 MEIOCA2RUB1 952 aa9.41□□□□□ -0.9
SLIRP-205ENST00000556310 C17orf98A8MV24 154 aa9.41□□□□□ -0.9
SLIRP-205ENST00000556310 PTGES3LE9PB15 166 aa9.41□□□□□ -0.9
SLIRP-205ENST00000556310 GPX5O75715 221 aa9.41□□□□□ -0.9
SLIRP-205ENST00000556310 ATP6V1G2O95670 118 aa9.41□□□□□ -0.9
SLIRP-205ENST00000556310 PAHP00439 452 aa9.41□□□□□ -0.9
SLIRP-205ENST00000556310 CSN2P05814 226 aa9.41□□□□□ -0.9
SLIRP-205ENST00000556310 ZNF728P0DKX0 622 aa9.41□□□□□ -0.9
SLIRP-205ENST00000556310 ZNF44P15621 663 aa9.41□□□□□ -0.9
SLIRP-205ENST00000556310 LMO1P25800 156 aa9.41□□□□□ -0.9
SLIRP-205ENST00000556310 ERP29P30040 261 aaKnown RBP9.41□□□□□ -0.9
SLIRP-205ENST00000556310 ZNF93P35789 620 aaPredicted RBP9.41□□□□□ -0.9
SLIRP-205ENST00000556310 OR3A4PP47883 348 aa9.41□□□□□ -0.9
SLIRP-205ENST00000556310 P2RX3P56373 397 aa9.41□□□□□ -0.9
SLIRP-205ENST00000556310 FOXL1Q12952 345 aa9.41□□□□□ -0.9
SLIRP-205ENST00000556310 MIDNQ504T8 468 aa9.41□□□□□ -0.9
SLIRP-205ENST00000556310 Q6P435 159 aa9.41□□□□□ -0.9
SLIRP-205ENST00000556310 ASCL4Q6XD76 172 aa9.41□□□□□ -0.9
SLIRP-205ENST00000556310 PNKDQ8N490 385 aa9.41□□□□□ -0.9
SLIRP-205ENST00000556310 Q8NFD4 153 aa9.41□□□□□ -0.9
SLIRP-205ENST00000556310 OR4S1Q8NGB4 309 aa9.41□□□□□ -0.9
SLIRP-205ENST00000556310 ORAI1Q96D31 301 aa9.41□□□□□ -0.9
SLIRP-205ENST00000556310 ZNF714Q96N38 554 aa9.41□□□□□ -0.9
SLIRP-205ENST00000556310 DERL3Q96Q80 235 aa9.41□□□□□ -0.9
SLIRP-205ENST00000556310 CHIAQ9BZP6 476 aa9.41□□□□□ -0.9
SLIRP-205ENST00000556310 IL36GQ9NZH8 169 aa9.41□□□□□ -0.9
SLIRP-205ENST00000556310 LSM2Q9Y333 95 aaKnown RBP9.41□□□□□ -0.9
SLIRP-205ENST00000556310 TRAV8-7A0A075B6U6 113 aa9.4□□□□□ -0.9
SLIRP-205ENST00000556310 FUOMA2VDF0 154 aa9.4□□□□□ -0.9
SLIRP-205ENST00000556310 MAGEA13PA6NCF6 341 aa9.4□□□□□ -0.9
SLIRP-205ENST00000556310 SLC33A1O00400 549 aaPredicted RBP9.4□□□□□ -0.9
SLIRP-205ENST00000556310 IGHV4-59P01825 116 aa9.4□□□□□ -0.9
SLIRP-205ENST00000556310 LORP23490 312 aaPredicted RBP9.4□□□□□ -0.9
SLIRP-205ENST00000556310 COX7A1P24310 79 aa9.4□□□□□ -0.9
SLIRP-205ENST00000556310 MAPK3P27361 379 aaPredicted RBP9.4□□□□□ -0.9
SLIRP-205ENST00000556310 PTGFRP43088 359 aa9.4□□□□□ -0.9
SLIRP-205ENST00000556310 IER3P46695 156 aa9.4□□□□□ -0.9
SLIRP-205ENST00000556310 RPL15P61313 204 aaKnown RBP9.4□□□□□ -0.9
SLIRP-205ENST00000556310 IL13RA2Q14627 380 aa9.4□□□□□ -0.9
SLIRP-205ENST00000556310 IRF3Q14653 427 aa9.4□□□□□ -0.9
SLIRP-205ENST00000556310 RSU1Q15404 277 aa9.4□□□□□ -0.9
SLIRP-205ENST00000556310 AWAT1Q58HT5 328 aa9.4□□□□□ -0.9
SLIRP-205ENST00000556310 ZNF782Q6ZMW2 699 aaPredicted RBP9.4□□□□□ -0.9
SLIRP-205ENST00000556310 TPRX1Q8N7U7 411 aa9.4□□□□□ -0.9
SLIRP-205ENST00000556310 OR51T1Q8NGJ9 327 aa9.4□□□□□ -0.9
SLIRP-205ENST00000556310 SGCDQ92629 289 aa9.4□□□□□ -0.9
SLIRP-205ENST00000556310 ZNF184Q99676 751 aaPredicted RBP9.4□□□□□ -0.9
SLIRP-205ENST00000556310 NKX3-1Q99801 234 aaPredicted RBP9.4□□□□□ -0.9
SLIRP-205ENST00000556310 PPA2Q9H2U2 334 aa9.4□□□□□ -0.9
SLIRP-205ENST00000556310 DPAGT1Q9H3H5 408 aa9.4□□□□□ -0.9
SLIRP-205ENST00000556310 DUSP21Q9H596 190 aa9.4□□□□□ -0.9
SLIRP-205ENST00000556310 KIAA2026Q5HYC2 2103 aa9.4□□□□□ -0.91
SLIRP-205ENST00000556310 A0A0G2JK05 382 aa9.39□□□□□ -0.91
SLIRP-205ENST00000556310 MEX3AA1L020 520 aaKnown RBP9.39□□□□□ -0.91
SLIRP-205ENST00000556310 BTBD17A6NE02 478 aa9.39□□□□□ -0.91
SLIRP-205ENST00000556310 FAM181BA6NEQ2 426 aa9.39□□□□□ -0.91
SLIRP-205ENST00000556310 DEGS1O15121 323 aa9.39□□□□□ -0.91
SLIRP-205ENST00000556310 RGS10O43665 173 aa9.39□□□□□ -0.91
SLIRP-205ENST00000556310 CLPXO76031 633 aa9.39□□□□□ -0.91
SLIRP-205ENST00000556310 IGHV1-8P0DP01 117 aa9.39□□□□□ -0.91
SLIRP-205ENST00000556310 CRHBPP24387 322 aa9.39□□□□□ -0.91
SLIRP-205ENST00000556310 SCN1BQ07699 218 aa9.39□□□□□ -0.91
SLIRP-205ENST00000556310 SPHARQ15513 63 aa9.39□□□□□ -0.91
SLIRP-205ENST00000556310 NHLRC3Q5JS37 347 aa9.39□□□□□ -0.91
SLIRP-205ENST00000556310 TRAPPC6BQ86SZ2 158 aa9.39□□□□□ -0.91
SLIRP-205ENST00000556310 BEND2Q8NDZ0 799 aa9.39□□□□□ -0.91
SLIRP-205ENST00000556310 OR13D1Q8NGV5 346 aa9.39□□□□□ -0.91
SLIRP-205ENST00000556310 OR10K1Q8NGX5 313 aa9.39□□□□□ -0.91
SLIRP-205ENST00000556310 DYRK2Q92630 601 aa9.39□□□□□ -0.91
SLIRP-205ENST00000556310 OR5M11Q96RB7 305 aa9.39□□□□□ -0.91
SLIRP-205ENST00000556310 METTL9Q9H1A3 318 aa9.39□□□□□ -0.91
SLIRP-205ENST00000556310 TNFRSF19Q9NS68 423 aa9.39□□□□□ -0.91
SLIRP-205ENST00000556310 RAB26Q9ULW5 256 aa9.39□□□□□ -0.91
SLIRP-205ENST00000556310 FOXJ3Q9UPW0 622 aa9.39□□□□□ -0.91
SLIRP-205ENST00000556310 UBE2J1Q9Y385 318 aaPredicted RBP9.39□□□□□ -0.91
SLIRP-205ENST00000556310 TRGV10A0A0A0MS01 117 aa9.38□□□□□ -0.91
SLIRP-205ENST00000556310 A0A1W2PPK0 400 aa9.38□□□□□ -0.91
SLIRP-205ENST00000556310 ODAMA1E959 279 aa9.38□□□□□ -0.91
SLIRP-205ENST00000556310 ODF3BA8MYP8 253 aa9.38□□□□□ -0.91
SLIRP-205ENST00000556310 PIN1P1O15428 100 aa9.38□□□□□ -0.91
SLIRP-205ENST00000556310 GPR137BO60478 399 aa9.38□□□□□ -0.91
SLIRP-205ENST00000556310 ZNF780AO75290 641 aaPredicted RBP9.38□□□□□ -0.91
SLIRP-205ENST00000556310 CDRT1O95170 752 aa9.38□□□□□ -0.91
SLIRP-205ENST00000556310 HTR3BO95264 441 aa9.38□□□□□ -0.91
SLIRP-205ENST00000556310 CSTBP04080 98 aaKnown RBP9.38□□□□□ -0.91
SLIRP-205ENST00000556310 CFPP27918 469 aa9.38□□□□□ -0.91
SLIRP-205ENST00000556310 TGFBR2P37173 567 aa9.38□□□□□ -0.91
SLIRP-205ENST00000556310 VHLP40337 213 aa9.38□□□□□ -0.91
SLIRP-205ENST00000556310 RBM11P57052 281 aaKnown RBP9.38□□□□□ -0.91
SLIRP-205ENST00000556310 AESQ08117 197 aa9.38□□□□□ -0.91
SLIRP-205ENST00000556310 ATXN7L3Q14CW9 347 aaPredicted RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms