RNA–Protein interactions for RNA: ENST00000556288.5

ATXN3-238, Transcript of ataxin 3, human

TSL 1 (best)

Gene ATXN3, Length 901 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-238	ENST00000556288	MEX3A	A1L020	520 aa	Known RBP	3.85	□□□□□ -1.79
ATXN3-238	ENST00000556288	NKX6-3	A6NJ46	265 aa		3.85	□□□□□ -1.79
ATXN3-238	ENST00000556288	OR5B21	A6NL26	309 aa		3.85	□□□□□ -1.79
ATXN3-238	ENST00000556288	OR2AT4	A6NND4	320 aa		3.85	□□□□□ -1.79
ATXN3-238	ENST00000556288		J3QRE1	110 aa		3.85	□□□□□ -1.79
ATXN3-238	ENST00000556288	SPRY1	O43609	319 aa	Predicted RBP	3.85	□□□□□ -1.79
ATXN3-238	ENST00000556288	NDUFA2	O43678	99 aa		3.85	□□□□□ -1.79
ATXN3-238	ENST00000556288	SYNGR1	O43759	233 aa		3.85	□□□□□ -1.79
ATXN3-238	ENST00000556288	SRSF10	O75494	262 aa	Known RBP	3.85	□□□□□ -1.79
ATXN3-238	ENST00000556288	GATB	O75879	557 aa	Known RBP	3.85	□□□□□ -1.79
ATXN3-238	ENST00000556288	CCDC159	P0C7I6	412 aa		3.85	□□□□□ -1.79
ATXN3-238	ENST00000556288	LIMS3	P0CW19	117 aa		3.85	□□□□□ -1.79
ATXN3-238	ENST00000556288	LIMS4	P0CW20	117 aa		3.85	□□□□□ -1.79
ATXN3-238	ENST00000556288	ATF1	P18846	271 aa		3.85	□□□□□ -1.79
ATXN3-238	ENST00000556288	PRKACB	P22694	351 aa		3.85	□□□□□ -1.79
ATXN3-238	ENST00000556288	C21orf33	P30042	268 aa	Predicted RBP	3.85	□□□□□ -1.79
ATXN3-238	ENST00000556288	VHL	P40337	213 aa		3.85	□□□□□ -1.79
ATXN3-238	ENST00000556288	CEBPD	P49716	269 aa	Predicted RBP	3.85	□□□□□ -1.79
ATXN3-238	ENST00000556288	RBP2	P50120	134 aa		3.85	□□□□□ -1.79
ATXN3-238	ENST00000556288	ARF6	P62330	175 aa		3.85	□□□□□ -1.79
ATXN3-238	ENST00000556288	ZNF154	Q13106	437 aa		3.85	□□□□□ -1.79
ATXN3-238	ENST00000556288	MED22	Q15528	200 aa		3.85	□□□□□ -1.79
ATXN3-238	ENST00000556288	UBE2V2	Q15819	145 aa		3.85	□□□□□ -1.79
ATXN3-238	ENST00000556288	ZNF181	Q2M3W8	571 aa		3.85	□□□□□ -1.79
ATXN3-238	ENST00000556288	ZNF404	Q494X3	552 aa		3.85	□□□□□ -1.79
ATXN3-238	ENST00000556288	TMEM155	Q4W5P6	130 aa		3.85	□□□□□ -1.79
ATXN3-238	ENST00000556288	LRRC10	Q5BKY1	277 aa		3.85	□□□□□ -1.79
ATXN3-238	ENST00000556288	ARMCX4	Q5H9R4	360 aa		3.85	□□□□□ -1.79
ATXN3-238	ENST00000556288	C6orf141	Q5SZD1	244 aa		3.85	□□□□□ -1.79
ATXN3-238	ENST00000556288	DGAT2L7P	Q6IED9	249 aa		3.85	□□□□□ -1.79
ATXN3-238	ENST00000556288	RPL22L1	Q6P5R6	122 aa	Known RBP	3.85	□□□□□ -1.79
ATXN3-238	ENST00000556288	RBMS3	Q6XE24	437 aa	Known RBP	3.85	□□□□□ -1.79
ATXN3-238	ENST00000556288	SLC25A26	Q70HW3	274 aa		3.85	□□□□□ -1.79
ATXN3-238	ENST00000556288	BTN2A1	Q7KYR7	527 aa		3.85	□□□□□ -1.79
ATXN3-238	ENST00000556288	SLC36A1	Q7Z2H8	476 aa		3.85	□□□□□ -1.79
ATXN3-238	ENST00000556288	SERPINA12	Q8IW75	414 aa		3.85	□□□□□ -1.79
ATXN3-238	ENST00000556288	MKX	Q8IYA7	352 aa		3.85	□□□□□ -1.79
ATXN3-238	ENST00000556288	FAM185A	Q8N0U4	392 aa		3.85	□□□□□ -1.79
ATXN3-238	ENST00000556288	FGFRL1	Q8N441	504 aa		3.85	□□□□□ -1.79
ATXN3-238	ENST00000556288	BPIFB2	Q8N4F0	458 aa		3.85	□□□□□ -1.79
ATXN3-238	ENST00000556288	GCSAM	Q8N6F7	178 aa		3.85	□□□□□ -1.79
ATXN3-238	ENST00000556288	TMEM185A	Q8NFB2	350 aa		3.85	□□□□□ -1.79
ATXN3-238	ENST00000556288	OR4M1	Q8NGD0	313 aa		3.85	□□□□□ -1.79
ATXN3-238	ENST00000556288	OR51A4	Q8NGJ6	313 aa		3.85	□□□□□ -1.79
ATXN3-238	ENST00000556288	OR5D18	Q8NGL1	313 aa		3.85	□□□□□ -1.79
ATXN3-238	ENST00000556288	OR13C9	Q8NGT0	318 aa		3.85	□□□□□ -1.79
ATXN3-238	ENST00000556288	OR10AC1	Q8NH08	325 aa		3.85	□□□□□ -1.79
ATXN3-238	ENST00000556288	NANP	Q8TBE9	248 aa		3.85	□□□□□ -1.79
ATXN3-238	ENST00000556288	WIPF2	Q8TF74	440 aa	Predicted RBP	3.85	□□□□□ -1.79
ATXN3-238	ENST00000556288	RAB40A	Q8WXH6	277 aa		3.85	□□□□□ -1.79
ATXN3-238	ENST00000556288	ORAI1	Q96D31	301 aa		3.85	□□□□□ -1.79
ATXN3-238	ENST00000556288	ADAT3	Q96EY9	351 aa	Predicted RBP	3.85	□□□□□ -1.79
ATXN3-238	ENST00000556288	S100A13	Q99584	98 aa		3.85	□□□□□ -1.79
ATXN3-238	ENST00000556288	NUDT16L1	Q9BRJ7	211 aa	Known RBP	3.85	□□□□□ -1.79
ATXN3-238	ENST00000556288	FAM192A	Q9GZU8	254 aa		3.85	□□□□□ -1.79
ATXN3-238	ENST00000556288	OR51I2	Q9H344	312 aa		3.85	□□□□□ -1.79
ATXN3-238	ENST00000556288	INPP5E	Q9NRR6	644 aa		3.85	□□□□□ -1.79
ATXN3-238	ENST00000556288	TNFRSF19	Q9NS68	423 aa		3.85	□□□□□ -1.79
ATXN3-238	ENST00000556288	GLS2	Q9UI32	602 aa		3.85	□□□□□ -1.79
ATXN3-238	ENST00000556288	PSORS1C1	Q9UIG5	152 aa		3.85	□□□□□ -1.79
ATXN3-238	ENST00000556288	DIMT1	Q9UNQ2	313 aa	Known RBP	3.85	□□□□□ -1.79
ATXN3-238	ENST00000556288	CAB39	Q9Y376	341 aa	Predicted RBP	3.85	□□□□□ -1.79
ATXN3-238	ENST00000556288	HSPE1-MOB4	S4R3N1	261 aa		3.85	□□□□□ -1.79
ATXN3-238	ENST00000556288	PPIAL4C	A0A0B4J2A2	164 aa		3.84	□□□□□ -1.79
ATXN3-238	ENST00000556288		A0A1B0GW55	424 aa		3.84	□□□□□ -1.79
ATXN3-238	ENST00000556288	PQLC2L	A1A4F0	135 aa		3.84	□□□□□ -1.79
ATXN3-238	ENST00000556288	RFPL4A	A6NLU0	287 aa		3.84	□□□□□ -1.79
ATXN3-238	ENST00000556288	TMEM212	A6NML5	194 aa		3.84	□□□□□ -1.79
ATXN3-238	ENST00000556288	OR4C45	A6NMZ5	311 aa		3.84	□□□□□ -1.79
ATXN3-238	ENST00000556288		E9PQ18	207 aa		3.84	□□□□□ -1.79
ATXN3-238	ENST00000556288	RFPL4AL1	F8VTS6	287 aa		3.84	□□□□□ -1.79
ATXN3-238	ENST00000556288	SLC1A7	O00341	560 aa		3.84	□□□□□ -1.79
ATXN3-238	ENST00000556288	ANGPTL7	O43827	346 aa		3.84	□□□□□ -1.79
ATXN3-238	ENST00000556288	LHB	P01229	141 aa		3.84	□□□□□ -1.79
ATXN3-238	ENST00000556288	MAS1	P04201	325 aa		3.84	□□□□□ -1.79
ATXN3-238	ENST00000556288	CDK1	P06493	297 aa		3.84	□□□□□ -1.79
ATXN3-238	ENST00000556288	CD2	P06729	351 aa		3.84	□□□□□ -1.79
ATXN3-238	ENST00000556288	FAM157C	P0CG43	387 aa		3.84	□□□□□ -1.79
ATXN3-238	ENST00000556288	DUX4L2	P0CJ85	424 aa		3.84	□□□□□ -1.79
ATXN3-238	ENST00000556288	DUX4L3	P0CJ86	424 aa		3.84	□□□□□ -1.79
ATXN3-238	ENST00000556288	DUX4L4	P0CJ87	422 aa		3.84	□□□□□ -1.79
ATXN3-238	ENST00000556288	DUX4L5	P0CJ88	424 aa		3.84	□□□□□ -1.79
ATXN3-238	ENST00000556288	DUX4L6	P0CJ89	424 aa		3.84	□□□□□ -1.79
ATXN3-238	ENST00000556288	DUX4L7	P0CJ90	424 aa		3.84	□□□□□ -1.79
ATXN3-238	ENST00000556288	PPIAL4G	P0DN37	164 aa		3.84	□□□□□ -1.79
ATXN3-238	ENST00000556288	PSG2	P11465	335 aa		3.84	□□□□□ -1.79
ATXN3-238	ENST00000556288	PIP	P12273	146 aa	Predicted RBP	3.84	□□□□□ -1.79
ATXN3-238	ENST00000556288	MUC1	P15941	1255 aa	Predicted RBP	3.84	□□□□□ -1.79
ATXN3-238	ENST00000556288	PRKACA	P17612	351 aa		3.84	□□□□□ -1.79
ATXN3-238	ENST00000556288	CEL	P19835	753 aa		3.84	□□□□□ -1.79
ATXN3-238	ENST00000556288	RAB3A	P20336	220 aa		3.84	□□□□□ -1.79
ATXN3-238	ENST00000556288	BCL3	P20749	454 aa		3.84	□□□□□ -1.79
ATXN3-238	ENST00000556288	AZGP1	P25311	298 aa	Known RBP	3.84	□□□□□ -1.79
ATXN3-238	ENST00000556288	PRDX2	P32119	198 aa		3.84	□□□□□ -1.79
ATXN3-238	ENST00000556288	HSPA13	P48723	471 aa		3.84	□□□□□ -1.79
ATXN3-238	ENST00000556288	CCR9	P51686	369 aa		3.84	□□□□□ -1.79
ATXN3-238	ENST00000556288	FGF12	P61328	243 aa		3.84	□□□□□ -1.79
ATXN3-238	ENST00000556288	PPP3R1	P63098	170 aa		3.84	□□□□□ -1.79
ATXN3-238	ENST00000556288	PRB3	Q04118	309 aa	Predicted RBP	3.84	□□□□□ -1.79
ATXN3-238	ENST00000556288	MRPL28	Q13084	256 aa	Known RBP	3.84	□□□□□ -1.79

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