RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 EHFQ9NZC4 300 aa7.06□□□□□ -1.28
ATXN3-235ENST00000556082 TUBD1Q9UJT1 453 aa7.06□□□□□ -1.28
ATXN3-235ENST00000556082 ZNF835Q9Y2P0 537 aa7.06□□□□□ -1.28
ATXN3-235ENST00000556082 POLDIP2Q9Y2S7 368 aa7.06□□□□□ -1.28
ATXN3-235ENST00000556082 ARHGAP21Q5T5U3 1957 aa7.06□□□□□ -1.28
ATXN3-235ENST00000556082 OR5H14A6NHG9 310 aa7.05□□□□□ -1.28
ATXN3-235ENST00000556082 MCRIP1C9JLW8 97 aa7.05□□□□□ -1.28
ATXN3-235ENST00000556082 F8VVB4 439 aa7.05□□□□□ -1.28
ATXN3-235ENST00000556082 F8VWA3 439 aa7.05□□□□□ -1.28
ATXN3-235ENST00000556082 GOSR2O14653 212 aa7.05□□□□□ -1.28
ATXN3-235ENST00000556082 OR7C1O76099 320 aaPredicted RBP7.05□□□□□ -1.28
ATXN3-235ENST00000556082 SFT2D2O95562 160 aa7.05□□□□□ -1.28
ATXN3-235ENST00000556082 CTSDP07339 412 aaPredicted RBP7.05□□□□□ -1.28
ATXN3-235ENST00000556082 CTXN2P0C2S0 81 aa7.05□□□□□ -1.28
ATXN3-235ENST00000556082 CECR9P0C854 216 aa7.05□□□□□ -1.28
ATXN3-235ENST00000556082 OR5H8P0DN80 308 aa7.05□□□□□ -1.28
ATXN3-235ENST00000556082 NFYAP23511 347 aaPredicted RBP7.05□□□□□ -1.28
ATXN3-235ENST00000556082 OPRM1P35372 400 aa7.05□□□□□ -1.28
ATXN3-235ENST00000556082 NPY4RP50391 375 aa7.05□□□□□ -1.28
ATXN3-235ENST00000556082 UCP3P55916 312 aa7.05□□□□□ -1.28
ATXN3-235ENST00000556082 ARPC4P59998 168 aa7.05□□□□□ -1.28
ATXN3-235ENST00000556082 FGL1Q08830 312 aa7.05□□□□□ -1.28
ATXN3-235ENST00000556082 MZT1Q08AG7 82 aa7.05□□□□□ -1.28
ATXN3-235ENST00000556082 RBM39Q14498 530 aaKnown RBP7.05□□□□□ -1.28
ATXN3-235ENST00000556082 TSC22D1Q15714 1073 aa7.05□□□□□ -1.28
ATXN3-235ENST00000556082 LY6G6FQ5SQ64 297 aa7.05□□□□□ -1.28
ATXN3-235ENST00000556082 SHEQ5VZ18 495 aa7.05□□□□□ -1.28
ATXN3-235ENST00000556082 FAM58AQ8N1B3 248 aa7.05□□□□□ -1.28
ATXN3-235ENST00000556082 Q8NA96 180 aa7.05□□□□□ -1.28
ATXN3-235ENST00000556082 ADAD2Q8NCV1 583 aaKnown RBP7.05□□□□□ -1.28
ATXN3-235ENST00000556082 NAXEQ8NCW5 288 aa7.05□□□□□ -1.28
ATXN3-235ENST00000556082 EXTL1Q92935 676 aa7.05□□□□□ -1.28
ATXN3-235ENST00000556082 SLAMF9Q96A28 289 aa7.05□□□□□ -1.28
ATXN3-235ENST00000556082 TMEM230Q96A57 120 aa7.05□□□□□ -1.28
ATXN3-235ENST00000556082 NRIP2Q9BQI9 281 aa7.05□□□□□ -1.28
ATXN3-235ENST00000556082 HDHD3Q9BSH5 251 aaPredicted RBP7.05□□□□□ -1.28
ATXN3-235ENST00000556082 CHIAQ9BZP6 476 aa7.05□□□□□ -1.28
ATXN3-235ENST00000556082 TLNRD1Q9H1K6 362 aa7.05□□□□□ -1.28
ATXN3-235ENST00000556082 ZNF442Q9H7R0 627 aa7.05□□□□□ -1.28
ATXN3-235ENST00000556082 HEXA-AS1Q9H8Q6 139 aa7.05□□□□□ -1.28
ATXN3-235ENST00000556082 ZNF286AQ9HBT8 521 aa7.05□□□□□ -1.28
ATXN3-235ENST00000556082 TMEM100Q9NV29 134 aa7.05□□□□□ -1.28
ATXN3-235ENST00000556082 ZNF701Q9NV72 531 aaPredicted RBP7.05□□□□□ -1.28
ATXN3-235ENST00000556082 TREM2Q9NZC2 230 aa7.05□□□□□ -1.28
ATXN3-235ENST00000556082 ZNF581Q9P0T4 197 aa7.05□□□□□ -1.28
ATXN3-235ENST00000556082 PURGQ9UJV8 347 aaKnown RBP7.05□□□□□ -1.28
ATXN3-235ENST00000556082 TP53TG5Q9Y2B4 290 aa7.05□□□□□ -1.28
ATXN3-235ENST00000556082 IGHV2OR16-5A0A0B4J2B6 119 aa7.04□□□□□ -1.28
ATXN3-235ENST00000556082 IGHV1-18A0A0C4DH31 117 aa7.04□□□□□ -1.28
ATXN3-235ENST00000556082 A0A1W2PR80 420 aa7.04□□□□□ -1.28
ATXN3-235ENST00000556082 FAM221AA4D161 298 aa7.04□□□□□ -1.28
ATXN3-235ENST00000556082 RFPL4AA6NLU0 287 aa7.04□□□□□ -1.28
ATXN3-235ENST00000556082 A8MXE2 369 aa7.04□□□□□ -1.28
ATXN3-235ENST00000556082 RFPL4AL1F8VTS6 287 aa7.04□□□□□ -1.28
ATXN3-235ENST00000556082 H7C1Q1 480 aa7.04□□□□□ -1.28
ATXN3-235ENST00000556082 SDCBPO00560 298 aaPredicted RBP7.04□□□□□ -1.28
ATXN3-235ENST00000556082 PRRG2O14669 202 aa7.04□□□□□ -1.28
ATXN3-235ENST00000556082 SYNGR1O43759 233 aa7.04□□□□□ -1.28
ATXN3-235ENST00000556082 ATP6V1G1O75348 118 aa7.04□□□□□ -1.28
ATXN3-235ENST00000556082 AGFG2O95081 481 aa7.04□□□□□ -1.28
ATXN3-235ENST00000556082 PGA5P0DJD9 388 aa7.04□□□□□ -1.28
ATXN3-235ENST00000556082 SLC25A4P12235 298 aa7.04□□□□□ -1.28
ATXN3-235ENST00000556082 RPS2P15880 293 aaKnown RBP7.04□□□□□ -1.28
ATXN3-235ENST00000556082 AKR1C4P17516 323 aa7.04□□□□□ -1.28
ATXN3-235ENST00000556082 TMPRSS3P57727 454 aa7.04□□□□□ -1.28
ATXN3-235ENST00000556082 SEC61A1P61619 476 aaKnown RBP7.04□□□□□ -1.28
ATXN3-235ENST00000556082 CYCSP99999 105 aaKnown RBP7.04□□□□□ -1.28
ATXN3-235ENST00000556082 NAAAQ02083 359 aa7.04□□□□□ -1.28
ATXN3-235ENST00000556082 ZNF718Q3SXZ3 478 aa7.04□□□□□ -1.28
ATXN3-235ENST00000556082 SPIN3Q5JUX0 258 aa7.04□□□□□ -1.28
ATXN3-235ENST00000556082 SPATA46Q5T0L3 261 aa7.04□□□□□ -1.28
ATXN3-235ENST00000556082 DCAF12L2Q5VW00 463 aa7.04□□□□□ -1.28
ATXN3-235ENST00000556082 C11orf88Q6PI97 169 aa7.04□□□□□ -1.28
ATXN3-235ENST00000556082 C17orf107Q6ZR85 190 aa7.04□□□□□ -1.28
ATXN3-235ENST00000556082 LCNL1Q6ZST4 164 aa7.04□□□□□ -1.28
ATXN3-235ENST00000556082 DOLPP1Q86YN1 238 aa7.04□□□□□ -1.28
ATXN3-235ENST00000556082 GAPTQ8N292 157 aa7.04□□□□□ -1.28
ATXN3-235ENST00000556082 SCCPDHQ8NBX0 429 aa7.04□□□□□ -1.28
ATXN3-235ENST00000556082 BHLHE23Q8NDY6 225 aa7.04□□□□□ -1.28
ATXN3-235ENST00000556082 COQ8AQ8NI60 647 aa7.04□□□□□ -1.28
ATXN3-235ENST00000556082 PIK3IP1Q96FE7 263 aa7.04□□□□□ -1.28
ATXN3-235ENST00000556082 CYYR1Q96J86 154 aa7.04□□□□□ -1.28
ATXN3-235ENST00000556082 FAM210AQ96ND0 272 aa7.04□□□□□ -1.28
ATXN3-235ENST00000556082 RSRP1Q9BUV0 290 aa7.04□□□□□ -1.28
ATXN3-235ENST00000556082 CXXC4Q9H2H0 198 aa7.04□□□□□ -1.28
ATXN3-235ENST00000556082 SEBOXQ9HB31 216 aaPredicted RBP7.04□□□□□ -1.28
ATXN3-235ENST00000556082 Q9N2K0 584 aa7.04□□□□□ -1.28
ATXN3-235ENST00000556082 RAB18Q9NP72 206 aa7.04□□□□□ -1.28
ATXN3-235ENST00000556082 ELOVL5Q9NYP7 299 aa7.04□□□□□ -1.28
ATXN3-235ENST00000556082 SPEF1Q9Y4P9 236 aa7.04□□□□□ -1.28
ATXN3-235ENST00000556082 MYO7BQ6PIF6 2116 aa7.03□□□□□ -1.28
ATXN3-235ENST00000556082 KIR2DS1A0A191URI9 304 aa7.03□□□□□ -1.28
ATXN3-235ENST00000556082 TRDCB7Z8K6 153 aa7.03□□□□□ -1.28
ATXN3-235ENST00000556082 NPIPB6E9PJ23 425 aa7.03□□□□□ -1.28
ATXN3-235ENST00000556082 DEGS1O15121 323 aa7.03□□□□□ -1.28
ATXN3-235ENST00000556082 SIX6O95475 246 aa7.03□□□□□ -1.28
ATXN3-235ENST00000556082 PTBP3O95758 552 aaKnown RBP7.03□□□□□ -1.28
ATXN3-235ENST00000556082 RPA2P15927 270 aa7.03□□□□□ -1.28
ATXN3-235ENST00000556082 GLRA1P23415 457 aa7.03□□□□□ -1.28
ATXN3-235ENST00000556082 MPV17P39210 176 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms