RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 SLC33A1O00400 549 aaPredicted RBP11.34□□□□□ -0.59
CHMP4BP1-201ENST00000556017 CCDC159P0C7I6 412 aa11.34□□□□□ -0.59
CHMP4BP1-201ENST00000556017 MTCP1P56278 107 aa11.34□□□□□ -0.59
CHMP4BP1-201ENST00000556017 RPL23AP62750 156 aaKnown RBP11.34□□□□□ -0.59
CHMP4BP1-201ENST00000556017 ATP6AP1Q15904 470 aa11.34□□□□□ -0.59
CHMP4BP1-201ENST00000556017 TP53I3Q53FA7 332 aa11.34□□□□□ -0.59
CHMP4BP1-201ENST00000556017 OR2W3Q7Z3T1 314 aa11.34□□□□□ -0.59
CHMP4BP1-201ENST00000556017 OR10H4Q8NGA5 316 aa11.34□□□□□ -0.59
CHMP4BP1-201ENST00000556017 STMN2Q93045 179 aa11.34□□□□□ -0.59
CHMP4BP1-201ENST00000556017 EME1Q96AY2 570 aa11.34□□□□□ -0.59
CHMP4BP1-201ENST00000556017 FGGYQ96C11 551 aa11.34□□□□□ -0.59
CHMP4BP1-201ENST00000556017 KIRREL1Q96J84 757 aa11.34□□□□□ -0.59
CHMP4BP1-201ENST00000556017 WWC2-AS2Q96NR7 200 aa11.34□□□□□ -0.59
CHMP4BP1-201ENST00000556017 CIB1Q99828 191 aa11.34□□□□□ -0.59
CHMP4BP1-201ENST00000556017 PRRG3Q9BZD7 231 aa11.34□□□□□ -0.59
CHMP4BP1-201ENST00000556017 GABARAPL1Q9H0R8 117 aa11.34□□□□□ -0.59
CHMP4BP1-201ENST00000556017 GAL3ST2Q9H3Q3 398 aa11.34□□□□□ -0.59
CHMP4BP1-201ENST00000556017 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.34□□□□□ -0.59
CHMP4BP1-201ENST00000556017 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.34□□□□□ -0.59
CHMP4BP1-201ENST00000556017 TRGV10A0A0A0MS01 117 aa11.33□□□□□ -0.6
CHMP4BP1-201ENST00000556017 PSMB11A5LHX3 300 aa11.33□□□□□ -0.6
CHMP4BP1-201ENST00000556017 LINC01548A6NM66 108 aa11.33□□□□□ -0.6
CHMP4BP1-201ENST00000556017 SH2D1BO14796 132 aa11.33□□□□□ -0.6
CHMP4BP1-201ENST00000556017 ISG15P05161 165 aa11.33□□□□□ -0.6
CHMP4BP1-201ENST00000556017 UBCP0CG48 685 aaKnown RBP11.33□□□□□ -0.6
CHMP4BP1-201ENST00000556017 NKAPLQ5M9Q1 402 aa11.33□□□□□ -0.6
CHMP4BP1-201ENST00000556017 FDX2Q6P4F2 183 aa11.33□□□□□ -0.6
CHMP4BP1-201ENST00000556017 C8orf86Q6ZUL3 223 aa11.33□□□□□ -0.6
CHMP4BP1-201ENST00000556017 THNSL2Q86YJ6 484 aa11.33□□□□□ -0.6
CHMP4BP1-201ENST00000556017 C5orf56Q8N8D9 126 aa11.33□□□□□ -0.6
CHMP4BP1-201ENST00000556017 LINC00574Q9H8X3 128 aa11.33□□□□□ -0.6
CHMP4BP1-201ENST00000556017 EXOSC4Q9NPD3 245 aaKnown RBP11.33□□□□□ -0.6
CHMP4BP1-201ENST00000556017 OOSP1A8MZH6 123 aa11.32□□□□□ -0.6
CHMP4BP1-201ENST00000556017 G3V2T6 193 aa11.32□□□□□ -0.6
CHMP4BP1-201ENST00000556017 SERPINA3P01011 423 aa11.32□□□□□ -0.6
CHMP4BP1-201ENST00000556017 MT-ND2P03891 347 aa11.32□□□□□ -0.6
CHMP4BP1-201ENST00000556017 SNRNP70P08621 437 aaKnown RBP11.32□□□□□ -0.6
CHMP4BP1-201ENST00000556017 OR3A4PP47883 348 aa11.32□□□□□ -0.6
CHMP4BP1-201ENST00000556017 ZP1P60852 638 aa11.32□□□□□ -0.6
CHMP4BP1-201ENST00000556017 CD69Q07108 199 aa11.32□□□□□ -0.6
CHMP4BP1-201ENST00000556017 ATXN7L3Q14CW9 347 aaPredicted RBP11.32□□□□□ -0.6
CHMP4BP1-201ENST00000556017 KHDC1LQ5JSQ8 128 aa11.32□□□□□ -0.6
CHMP4BP1-201ENST00000556017 LHFPL2Q6ZUX7 228 aa11.32□□□□□ -0.6
CHMP4BP1-201ENST00000556017 OR51T1Q8NGJ9 327 aa11.32□□□□□ -0.6
CHMP4BP1-201ENST00000556017 OR5D18Q8NGL1 313 aa11.32□□□□□ -0.6
CHMP4BP1-201ENST00000556017 OR56B4Q8NH76 319 aa11.32□□□□□ -0.6
CHMP4BP1-201ENST00000556017 SPSB1Q96BD6 273 aa11.32□□□□□ -0.6
CHMP4BP1-201ENST00000556017 OPALINQ96PE5 141 aa11.32□□□□□ -0.6
CHMP4BP1-201ENST00000556017 LINC00527Q9UJ94 153 aa11.32□□□□□ -0.6
CHMP4BP1-201ENST00000556017 GNG8Q9UK08 70 aa11.32□□□□□ -0.6
CHMP4BP1-201ENST00000556017 MOB4Q9Y3A3 225 aa11.32□□□□□ -0.6
CHMP4BP1-201ENST00000556017 PCDHGB5Q9Y5G0 923 aa11.32□□□□□ -0.6
CHMP4BP1-201ENST00000556017 HSPE1-MOB4S4R3N1 261 aa11.32□□□□□ -0.6
CHMP4BP1-201ENST00000556017 LYSTQ99698 3801 aa11.32□□□□□ -0.6
CHMP4BP1-201ENST00000556017 KBTBD11-OT1A0A1B0GTJ5 212 aa11.31□□□□□ -0.6
CHMP4BP1-201ENST00000556017 OR4C45A6NMZ5 311 aa11.31□□□□□ -0.6
CHMP4BP1-201ENST00000556017 ZNF729A6NN14 1252 aaPredicted RBP11.31□□□□□ -0.6
CHMP4BP1-201ENST00000556017 E9PQ18 207 aa11.31□□□□□ -0.6
CHMP4BP1-201ENST00000556017 H0YHG0 523 aa11.31□□□□□ -0.6
CHMP4BP1-201ENST00000556017 M0QZK8 103 aa11.31□□□□□ -0.6
CHMP4BP1-201ENST00000556017 IGHV3-7P01780 117 aa11.31□□□□□ -0.6
CHMP4BP1-201ENST00000556017 PRKACBP22694 351 aa11.31□□□□□ -0.6
CHMP4BP1-201ENST00000556017 CEACAM3P40198 252 aa11.31□□□□□ -0.6
CHMP4BP1-201ENST00000556017 PTGFRP43088 359 aa11.31□□□□□ -0.6
CHMP4BP1-201ENST00000556017 C9orf152Q5JTZ5 239 aa11.31□□□□□ -0.6
CHMP4BP1-201ENST00000556017 KRBOX4Q5JUW0 171 aa11.31□□□□□ -0.6
CHMP4BP1-201ENST00000556017 TMEM244Q5VVB8 128 aa11.31□□□□□ -0.6
CHMP4BP1-201ENST00000556017 AMIGO2Q86SJ2 522 aa11.31□□□□□ -0.6
CHMP4BP1-201ENST00000556017 SAXO1Q8IYX7 474 aa11.31□□□□□ -0.6
CHMP4BP1-201ENST00000556017 DRAM1Q8N682 238 aa11.31□□□□□ -0.6
CHMP4BP1-201ENST00000556017 OR13A1Q8NGR1 328 aa11.31□□□□□ -0.6
CHMP4BP1-201ENST00000556017 OR13C9Q8NGT0 318 aa11.31□□□□□ -0.6
CHMP4BP1-201ENST00000556017 CAPSLQ8WWF8 208 aa11.31□□□□□ -0.6
CHMP4BP1-201ENST00000556017 LEAP2Q969E1 77 aa11.31□□□□□ -0.6
CHMP4BP1-201ENST00000556017 DUX3Q96PT4 197 aa11.31□□□□□ -0.6
CHMP4BP1-201ENST00000556017 ZNF649Q9BS31 505 aa11.31□□□□□ -0.6
CHMP4BP1-201ENST00000556017 ADI1Q9BV57 179 aa11.31□□□□□ -0.6
CHMP4BP1-201ENST00000556017 GABARAPL3Q9BY60 117 aa11.31□□□□□ -0.6
CHMP4BP1-201ENST00000556017 ING3Q9NXR8 418 aa11.31□□□□□ -0.6
CHMP4BP1-201ENST00000556017 ZNF581Q9P0T4 197 aa11.31□□□□□ -0.6
CHMP4BP1-201ENST00000556017 LSM4Q9Y4Z0 139 aaKnown RBP11.31□□□□□ -0.6
CHMP4BP1-201ENST00000556017 CSMD3Q7Z407 3707 aa11.31□□□□□ -0.6
CHMP4BP1-201ENST00000556017 TRAV24A0A0B4J272 114 aa11.3□□□□□ -0.6
CHMP4BP1-201ENST00000556017 H3BUI4 141 aa11.3□□□□□ -0.6
CHMP4BP1-201ENST00000556017 J3QR06 171 aa11.3□□□□□ -0.6
CHMP4BP1-201ENST00000556017 TOR1AO14656 332 aa11.3□□□□□ -0.6
CHMP4BP1-201ENST00000556017 GYG2O15488 501 aa11.3□□□□□ -0.6
CHMP4BP1-201ENST00000556017 IGHG2P01859 326 aa11.3□□□□□ -0.6
CHMP4BP1-201ENST00000556017 RBM39Q14498 530 aaKnown RBP11.3□□□□□ -0.6
CHMP4BP1-201ENST00000556017 KPNB1Q14974 876 aaKnown RBP11.3□□□□□ -0.6
CHMP4BP1-201ENST00000556017 OR4D6Q8NGJ1 314 aa11.3□□□□□ -0.6
CHMP4BP1-201ENST00000556017 OR8J1Q8NGP2 316 aa11.3□□□□□ -0.6
CHMP4BP1-201ENST00000556017 OR9G1Q8NH87 305 aa11.3□□□□□ -0.6
CHMP4BP1-201ENST00000556017 CREB3L1Q96BA8 519 aa11.3□□□□□ -0.6
CHMP4BP1-201ENST00000556017 RAX2Q96IS3 184 aa11.3□□□□□ -0.6
CHMP4BP1-201ENST00000556017 KIF25Q9UIL4 384 aa11.3□□□□□ -0.6
CHMP4BP1-201ENST00000556017 PSG11Q9UQ72 335 aa11.3□□□□□ -0.6
CHMP4BP1-201ENST00000556017 MYRFQ9Y2G1 1151 aa11.3□□□□□ -0.6
CHMP4BP1-201ENST00000556017 TENM2Q9NT68 2774 aa11.29□□□□□ -0.6
CHMP4BP1-201ENST00000556017 FUOMA2VDF0 154 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms