RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 PFN3P60673 137 aa3.59□□□□□ -1.83
VRK1-203ENST00000555067 SNRNP35Q16560 246 aaKnown RBP3.59□□□□□ -1.83
VRK1-203ENST00000555067 GUK1Q16774 197 aa3.59□□□□□ -1.83
VRK1-203ENST00000555067 C9orf129Q5T035 196 aaKnown RBP3.59□□□□□ -1.83
VRK1-203ENST00000555067 CAMK2N1Q7Z7J9 78 aa3.59□□□□□ -1.83
VRK1-203ENST00000555067 PRNTQ86SH4 94 aa3.59□□□□□ -1.83
VRK1-203ENST00000555067 C11orf42Q8N5U0 333 aa3.59□□□□□ -1.83
VRK1-203ENST00000555067 ZNF645Q8N7E2 425 aa3.59□□□□□ -1.83
VRK1-203ENST00000555067 SLC26A10Q8NG04 563 aa3.59□□□□□ -1.83
VRK1-203ENST00000555067 ZNF420Q8TAQ5 688 aaPredicted RBP3.59□□□□□ -1.83
VRK1-203ENST00000555067 TM4SF18Q96CE8 201 aa3.59□□□□□ -1.83
VRK1-203ENST00000555067 FXYD5Q96DB9 178 aa3.59□□□□□ -1.83
VRK1-203ENST00000555067 MRPL20Q9BYC9 149 aaKnown RBP3.59□□□□□ -1.83
VRK1-203ENST00000555067 CDC42EP4Q9H3Q1 356 aaKnown RBP3.59□□□□□ -1.83
VRK1-203ENST00000555067 ASB7Q9H672 318 aa3.59□□□□□ -1.83
VRK1-203ENST00000555067 VSIRQ9H7M9 311 aa3.59□□□□□ -1.83
VRK1-203ENST00000555067 MRPL40Q9NQ50 206 aaKnown RBP3.59□□□□□ -1.83
VRK1-203ENST00000555067 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.59□□□□□ -1.83
VRK1-203ENST00000555067 PSG11Q9UQ72 335 aa3.59□□□□□ -1.83
VRK1-203ENST00000555067 KLF13Q9Y2Y9 288 aaPredicted RBP3.59□□□□□ -1.83
VRK1-203ENST00000555067 FLT4P35916 1363 aa3.59□□□□□ -1.83
VRK1-203ENST00000555067 SETD1AO15047 1707 aaKnown RBP3.58□□□□□ -1.84
VRK1-203ENST00000555067 SIGLEC1Q9BZZ2 1709 aa3.58□□□□□ -1.84
VRK1-203ENST00000555067 SCN2AQ99250 2005 aa3.58□□□□□ -1.84
VRK1-203ENST00000555067 TGIF2-C20orf24A0A0A6YYL0 155 aa3.58□□□□□ -1.84
VRK1-203ENST00000555067 PGPA6NDG6 321 aa3.58□□□□□ -1.84
VRK1-203ENST00000555067 TMEM238C9JI98 176 aa3.58□□□□□ -1.84
VRK1-203ENST00000555067 PGRMC1O00264 195 aaKnown RBP3.58□□□□□ -1.84
VRK1-203ENST00000555067 UPK1AO00322 258 aa3.58□□□□□ -1.84
VRK1-203ENST00000555067 KPNA3O00505 521 aaPredicted RBP3.58□□□□□ -1.84
VRK1-203ENST00000555067 DENRO43583 198 aaKnown RBP3.58□□□□□ -1.84
VRK1-203ENST00000555067 FADS1O60427 444 aa3.58□□□□□ -1.84
VRK1-203ENST00000555067 GATBO75879 557 aaKnown RBP3.58□□□□□ -1.84
VRK1-203ENST00000555067 KRT75O95678 551 aa3.58□□□□□ -1.84
VRK1-203ENST00000555067 LY6G6DO95868 133 aa3.58□□□□□ -1.84
VRK1-203ENST00000555067 CA2P00918 260 aa3.58□□□□□ -1.84
VRK1-203ENST00000555067 INSP01308 110 aa3.58□□□□□ -1.84
VRK1-203ENST00000555067 IGLV2-8P01709 118 aa3.58□□□□□ -1.84
VRK1-203ENST00000555067 FABP1P07148 127 aa3.58□□□□□ -1.84
VRK1-203ENST00000555067 IL3RAP26951 378 aa3.58□□□□□ -1.84
VRK1-203ENST00000555067 ERFP50548 548 aa3.58□□□□□ -1.84
VRK1-203ENST00000555067 RAB25P57735 213 aa3.58□□□□□ -1.84
VRK1-203ENST00000555067 GRB2P62993 217 aaKnown RBP3.58□□□□□ -1.84
VRK1-203ENST00000555067 ADIGQ0VDE8 80 aa3.58□□□□□ -1.84
VRK1-203ENST00000555067 TAF1AQ15573 450 aaPredicted RBP3.58□□□□□ -1.84
VRK1-203ENST00000555067 LRRC75BQ2VPJ9 315 aa3.58□□□□□ -1.84
VRK1-203ENST00000555067 ZNF544Q6NX49 715 aa3.58□□□□□ -1.84
VRK1-203ENST00000555067 RASSF6Q6ZTQ3 369 aa3.58□□□□□ -1.84
VRK1-203ENST00000555067 OR1J4Q8NGS1 313 aa3.58□□□□□ -1.84
VRK1-203ENST00000555067 C16orf78Q8WTQ4 265 aa3.58□□□□□ -1.84
VRK1-203ENST00000555067 MRPL48Q96GC5 212 aaKnown RBP3.58□□□□□ -1.84
VRK1-203ENST00000555067 RNF157Q96PX1 679 aa3.58□□□□□ -1.84
VRK1-203ENST00000555067 LINC01587Q99440 93 aa3.58□□□□□ -1.84
VRK1-203ENST00000555067 EBNA1BP2Q99848 306 aaKnown RBP3.58□□□□□ -1.84
VRK1-203ENST00000555067 HDHD3Q9BSH5 251 aaPredicted RBP3.58□□□□□ -1.84
VRK1-203ENST00000555067 TIPINQ9BVW5 301 aa3.58□□□□□ -1.84
VRK1-203ENST00000555067 MROQ9BYG7 248 aa3.58□□□□□ -1.84
VRK1-203ENST00000555067 CHST5Q9GZS9 411 aa3.58□□□□□ -1.84
VRK1-203ENST00000555067 OR51I1Q9H343 314 aa3.58□□□□□ -1.84
VRK1-203ENST00000555067 PAQR5Q9NXK6 330 aaPredicted RBP3.58□□□□□ -1.84
VRK1-203ENST00000555067 STOML2Q9UJZ1 356 aa3.58□□□□□ -1.84
VRK1-203ENST00000555067 FARSAQ9Y285 508 aaKnown RBP3.58□□□□□ -1.84
VRK1-203ENST00000555067 INSIG2Q9Y5U4 225 aa3.58□□□□□ -1.84
VRK1-203ENST00000555067 CLUHO75153 1309 aa3.58□□□□□ -1.84
VRK1-203ENST00000555067 A0A1W2PP64 1363 aa3.58□□□□□ -1.84
VRK1-203ENST00000555067 PTPRKQ15262 1439 aa3.58□□□□□ -1.84
VRK1-203ENST00000555067 BTNL10A8MVZ5 291 aa3.57□□□□□ -1.84
VRK1-203ENST00000555067 INS-IGF2F8WCM5 200 aa3.57□□□□□ -1.84
VRK1-203ENST00000555067 SS18L1O75177 396 aaPredicted RBP3.57□□□□□ -1.84
VRK1-203ENST00000555067 MT-ND4P03905 459 aa3.57□□□□□ -1.84
VRK1-203ENST00000555067 GABRA1P14867 456 aa3.57□□□□□ -1.84
VRK1-203ENST00000555067 DNMT1P26358 1616 aaKnown RBP3.57□□□□□ -1.84
VRK1-203ENST00000555067 TAS2R43P59537 309 aa3.57□□□□□ -1.84
VRK1-203ENST00000555067 RAB14P61106 215 aa3.57□□□□□ -1.84
VRK1-203ENST00000555067 CDK5Q00535 292 aa3.57□□□□□ -1.84
VRK1-203ENST00000555067 PPIDQ08752 370 aaKnown RBP3.57□□□□□ -1.84
VRK1-203ENST00000555067 ERCC8Q13216 396 aa3.57□□□□□ -1.84
VRK1-203ENST00000555067 OR2F1Q13607 317 aa3.57□□□□□ -1.84
VRK1-203ENST00000555067 IRF4Q15306 451 aa3.57□□□□□ -1.84
VRK1-203ENST00000555067 ZNF404Q494X3 552 aa3.57□□□□□ -1.84
VRK1-203ENST00000555067 C1orf195Q5TG92 126 aa3.57□□□□□ -1.84
VRK1-203ENST00000555067 TNFAIP8L2Q6P589 184 aaPredicted RBP3.57□□□□□ -1.84
VRK1-203ENST00000555067 SPNS3Q6ZMD2 512 aa3.57□□□□□ -1.84
VRK1-203ENST00000555067 GID4Q8IVV7 300 aa3.57□□□□□ -1.84
VRK1-203ENST00000555067 DCAF4L2Q8NA75 395 aa3.57□□□□□ -1.84
VRK1-203ENST00000555067 OR2M7Q8NG81 312 aa3.57□□□□□ -1.84
VRK1-203ENST00000555067 CYGBQ8WWM9 190 aa3.57□□□□□ -1.84
VRK1-203ENST00000555067 TMEM158Q8WZ71 300 aa3.57□□□□□ -1.84
VRK1-203ENST00000555067 AP3S1Q92572 193 aa3.57□□□□□ -1.84
VRK1-203ENST00000555067 RDH5Q92781 318 aa3.57□□□□□ -1.84
VRK1-203ENST00000555067 SDHCQ99643 169 aaPredicted RBP3.57□□□□□ -1.84
VRK1-203ENST00000555067 GGTLC1Q9BX51 225 aa3.57□□□□□ -1.84
VRK1-203ENST00000555067 TLNRD1Q9H1K6 362 aa3.57□□□□□ -1.84
VRK1-203ENST00000555067 PARP11Q9NR21 331 aa3.57□□□□□ -1.84
VRK1-203ENST00000555067 MMP26Q9NRE1 261 aa3.57□□□□□ -1.84
VRK1-203ENST00000555067 FKBP14Q9NWM8 211 aa3.57□□□□□ -1.84
VRK1-203ENST00000555067 NUFIP1Q9UHK0 495 aaKnown RBP3.57□□□□□ -1.84
VRK1-203ENST00000555067 SLC22A7Q9Y694 548 aa3.57□□□□□ -1.84
VRK1-203ENST00000555067 PIKFYVEQ9Y2I7 2098 aa3.56□□□□□ -1.84
VRK1-203ENST00000555067 TRAV8-3A0A0A6YYJ7 113 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms