RNA–Protein interactions for RNA: ENST00000555022.5

SYNE2-217, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,396 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-217ENST00000555022 KCNK17Q96T54 332 aa7.73□□□□□ -1.17
SYNE2-217ENST00000555022 SNHG12Q9BXW3 62 aa7.73□□□□□ -1.17
SYNE2-217ENST00000555022 CUTCQ9NTM9 273 aa7.73□□□□□ -1.17
SYNE2-217ENST00000555022 IL36RNQ9UBH0 155 aa7.73□□□□□ -1.17
SYNE2-217ENST00000555022 A0A1W2PNV4 684 aa7.72□□□□□ -1.17
SYNE2-217ENST00000555022 CHST1O43916 411 aa7.72□□□□□ -1.17
SYNE2-217ENST00000555022 EFNA2O43921 213 aa7.72□□□□□ -1.17
SYNE2-217ENST00000555022 TBPP20226 339 aa7.72□□□□□ -1.17
SYNE2-217ENST00000555022 PCP4P48539 62 aa7.72□□□□□ -1.17
SYNE2-217ENST00000555022 DAP3P51398 398 aaKnown RBP7.72□□□□□ -1.17
SYNE2-217ENST00000555022 UCP3P55916 312 aa7.72□□□□□ -1.17
SYNE2-217ENST00000555022 RAB1AP62820 205 aa7.72□□□□□ -1.17
SYNE2-217ENST00000555022 HIKESHIQ53FT3 197 aa7.72□□□□□ -1.17
SYNE2-217ENST00000555022 OR8G2PQ6IF36 304 aa7.72□□□□□ -1.17
SYNE2-217ENST00000555022 TEX38Q6PEX7 206 aa7.72□□□□□ -1.17
SYNE2-217ENST00000555022 SDSLQ96GA7 329 aa7.72□□□□□ -1.17
SYNE2-217ENST00000555022 ZNF318Q5VUA4 2279 aa7.72□□□□□ -1.17
SYNE2-217ENST00000555022 GRIFINA4D1Z8 144 aa7.72□□□□□ -1.17
SYNE2-217ENST00000555022 PGPEP1LA6NFU8 196 aa7.72□□□□□ -1.17
SYNE2-217ENST00000555022 GUCA1AP43080 201 aaPredicted RBP7.72□□□□□ -1.17
SYNE2-217ENST00000555022 SLC6A8P48029 635 aa7.72□□□□□ -1.17
SYNE2-217ENST00000555022 SPCS3P61009 180 aa7.72□□□□□ -1.17
SYNE2-217ENST00000555022 GNB2P62879 340 aa7.72□□□□□ -1.17
SYNE2-217ENST00000555022 DLX2Q07687 328 aaPredicted RBP7.72□□□□□ -1.17
SYNE2-217ENST00000555022 ZNF787Q6DD87 383 aa7.72□□□□□ -1.17
SYNE2-217ENST00000555022 Q6ZVH6 145 aa7.72□□□□□ -1.17
SYNE2-217ENST00000555022 C16orf82Q7Z2V1 217 aa7.72□□□□□ -1.17
SYNE2-217ENST00000555022 ZNF721Q8TF20 911 aa7.72□□□□□ -1.17
SYNE2-217ENST00000555022 ADIPOR1Q96A54 375 aa7.72□□□□□ -1.17
SYNE2-217ENST00000555022 SLC46A1Q96NT5 459 aa7.72□□□□□ -1.17
SYNE2-217ENST00000555022 GINS3Q9BRX5 216 aa7.72□□□□□ -1.17
SYNE2-217ENST00000555022 SLC25A22Q9H936 323 aa7.72□□□□□ -1.17
SYNE2-217ENST00000555022 C9J4A7 227 aa7.71□□□□□ -1.17
SYNE2-217ENST00000555022 TMEM127O75204 238 aa7.71□□□□□ -1.17
SYNE2-217ENST00000555022 LCATP04180 440 aa7.71□□□□□ -1.17
SYNE2-217ENST00000555022 ISG15P05161 165 aa7.71□□□□□ -1.17
SYNE2-217ENST00000555022 LYL1P12980 280 aa7.71□□□□□ -1.17
SYNE2-217ENST00000555022 CTHP32929 405 aa7.71□□□□□ -1.17
SYNE2-217ENST00000555022 KIR2DL1P43626 348 aaPredicted RBP7.71□□□□□ -1.17
SYNE2-217ENST00000555022 GLIPR1P48060 266 aa7.71□□□□□ -1.17
SYNE2-217ENST00000555022 ZNF468Q5VIY5 522 aaPredicted RBP7.71□□□□□ -1.17
SYNE2-217ENST00000555022 TMEM252Q8N6L7 170 aa7.71□□□□□ -1.17
SYNE2-217ENST00000555022 PIGCQ92535 297 aa7.71□□□□□ -1.17
SYNE2-217ENST00000555022 RBMXL1Q96E39 390 aaKnown RBP7.71□□□□□ -1.17
SYNE2-217ENST00000555022 BOD1Q96IK1 185 aa7.71□□□□□ -1.17
SYNE2-217ENST00000555022 SMIM7Q9BQ49 75 aa7.71□□□□□ -1.17
SYNE2-217ENST00000555022 MRPL37Q9BZE1 423 aaKnown RBP7.71□□□□□ -1.17
SYNE2-217ENST00000555022 VSTM2BA6NLU5 285 aa7.71□□□□□ -1.18
SYNE2-217ENST00000555022 MT-ATP6P00846 226 aa7.71□□□□□ -1.18
SYNE2-217ENST00000555022 CRYAAP02489 173 aa7.71□□□□□ -1.18
SYNE2-217ENST00000555022 CCL2P13500 99 aa7.71□□□□□ -1.18
SYNE2-217ENST00000555022 ZNF43P17038 809 aa7.71□□□□□ -1.18
SYNE2-217ENST00000555022 PAX6P26367 422 aa7.71□□□□□ -1.18
SYNE2-217ENST00000555022 UBE2G2P60604 165 aa7.71□□□□□ -1.18
SYNE2-217ENST00000555022 TNFRSF9Q07011 255 aa7.71□□□□□ -1.18
SYNE2-217ENST00000555022 LIAT1Q6ZQX7 453 aa7.71□□□□□ -1.18
SYNE2-217ENST00000555022 GPBAR1Q8TDU6 330 aa7.71□□□□□ -1.18
SYNE2-217ENST00000555022 UCN2Q96RP3 112 aa7.71□□□□□ -1.18
SYNE2-217ENST00000555022 METTL7AQ9H8H3 244 aa7.71□□□□□ -1.18
SYNE2-217ENST00000555022 DCAF16Q9NXF7 216 aa7.71□□□□□ -1.18
SYNE2-217ENST00000555022 ZNF107Q9UII5 783 aaPredicted RBP7.71□□□□□ -1.18
SYNE2-217ENST00000555022 PAM16Q9Y3D7 125 aa7.71□□□□□ -1.18
SYNE2-217ENST00000555022 POMT1Q9Y6A1 747 aa7.71□□□□□ -1.18
SYNE2-217ENST00000555022 KIAA1324LA8MWY0 1029 aaPredicted RBP7.71□□□□□ -1.18
SYNE2-217ENST00000555022 PROB1E7EW31 1015 aa7.71□□□□□ -1.18
SYNE2-217ENST00000555022 SPINK4O60575 86 aa7.71□□□□□ -1.18
SYNE2-217ENST00000555022 CTSDP07339 412 aaPredicted RBP7.71□□□□□ -1.18
SYNE2-217ENST00000555022 FGF7P21781 194 aa7.71□□□□□ -1.18
SYNE2-217ENST00000555022 HSD17B7P56937 341 aa7.71□□□□□ -1.18
SYNE2-217ENST00000555022 OR1D5P58170 312 aa7.71□□□□□ -1.18
SYNE2-217ENST00000555022 RNF4P78317 190 aa7.71□□□□□ -1.18
SYNE2-217ENST00000555022 TDRG1Q3Y452 100 aa7.71□□□□□ -1.18
SYNE2-217ENST00000555022 MAML2Q8IZL2 1156 aaPredicted RBP7.71□□□□□ -1.18
SYNE2-217ENST00000555022 SGCZQ96LD1 299 aa7.71□□□□□ -1.18
SYNE2-217ENST00000555022 TMEM68Q96MH6 324 aa7.71□□□□□ -1.18
SYNE2-217ENST00000555022 RPRMQ9NS64 109 aa7.71□□□□□ -1.18
SYNE2-217ENST00000555022 MMACHCQ9Y4U1 282 aa7.71□□□□□ -1.18
SYNE2-217ENST00000555022 FRG2CA6NGY1 282 aa7.7□□□□□ -1.18
SYNE2-217ENST00000555022 ALG1L2C9J202 215 aa7.7□□□□□ -1.18
SYNE2-217ENST00000555022 HSPA12AO43301 675 aa7.7□□□□□ -1.18
SYNE2-217ENST00000555022 HNRNPA1P09651 372 aaKnown RBP eCLIP7.7□□□□□ -1.18
SYNE2-217ENST00000555022 PHYHD1Q5SRE7 291 aa7.7□□□□□ -1.18
SYNE2-217ENST00000555022 Q6ZS52 159 aa7.7□□□□□ -1.18
SYNE2-217ENST00000555022 TCF23Q7RTU1 214 aa7.7□□□□□ -1.18
SYNE2-217ENST00000555022 TIPARPQ7Z3E1 657 aaKnown RBP7.7□□□□□ -1.18
SYNE2-217ENST00000555022 TBC1D26Q86UD7 250 aa7.7□□□□□ -1.18
SYNE2-217ENST00000555022 IL22RA1Q8N6P7 574 aa7.7□□□□□ -1.18
SYNE2-217ENST00000555022 OR10G3Q8NGC4 313 aa7.7□□□□□ -1.18
SYNE2-217ENST00000555022 LIPHQ8WWY8 451 aa7.7□□□□□ -1.18
SYNE2-217ENST00000555022 PTX4Q96A99 478 aa7.7□□□□□ -1.18
SYNE2-217ENST00000555022 YPEL4Q96NS1 127 aa7.7□□□□□ -1.18
SYNE2-217ENST00000555022 TUBG2Q9NRH3 451 aa7.7□□□□□ -1.18
SYNE2-217ENST00000555022 STRAPQ9Y3F4 350 aaKnown RBP7.7□□□□□ -1.18
SYNE2-217ENST00000555022 RBM7Q9Y580 266 aaKnown RBP7.7□□□□□ -1.18
SYNE2-217ENST00000555022 SELENOKQ9Y6D0 94 aa7.7□□□□□ -1.18
SYNE2-217ENST00000555022 WDFY4Q6ZS81 3184 aa7.7□□□□□ -1.18
SYNE2-217ENST00000555022 LOC102724200A0A096LPH7 203 aaPredicted RBP7.7□□□□□ -1.18
SYNE2-217ENST00000555022 A8MWP6 167 aa7.7□□□□□ -1.18
SYNE2-217ENST00000555022 IGHG1P01857 330 aa7.7□□□□□ -1.18
SYNE2-217ENST00000555022 GZMHP20718 246 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms