RNA–Protein interactions for RNA: ENST00000554995.1

PSEN1-211, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 592 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-211ENST00000554995 ABCA11PQ4W5N1 156 aa3.29□□□□□ -1.88
PSEN1-211ENST00000554995 RBM48Q5RL73 367 aaKnown RBP3.29□□□□□ -1.88
PSEN1-211ENST00000554995 KCTD16Q68DU8 428 aa3.29□□□□□ -1.88
PSEN1-211ENST00000554995 FAM231DQ6ZW35 169 aa3.29□□□□□ -1.88
PSEN1-211ENST00000554995 SSX7Q7RTT5 188 aa3.29□□□□□ -1.88
PSEN1-211ENST00000554995 PDPNQ86YL7 162 aa3.29□□□□□ -1.88
PSEN1-211ENST00000554995 CRLF3Q8IUI8 442 aa3.29□□□□□ -1.88
PSEN1-211ENST00000554995 RNASEH2CQ8TDP1 164 aaKnown RBP3.29□□□□□ -1.88
PSEN1-211ENST00000554995 TNFRSF14Q92956 283 aa3.29□□□□□ -1.88
PSEN1-211ENST00000554995 CCDC127Q96BQ5 260 aa3.29□□□□□ -1.88
PSEN1-211ENST00000554995 BIRC8Q96P09 236 aa3.29□□□□□ -1.88
PSEN1-211ENST00000554995 ANGPTL4Q9BY76 406 aa3.29□□□□□ -1.88
PSEN1-211ENST00000554995 UPF3BQ9BZI7 483 aaKnown RBP3.29□□□□□ -1.88
PSEN1-211ENST00000554995 LHX5Q9H2C1 402 aa3.29□□□□□ -1.88
PSEN1-211ENST00000554995 DSN1Q9H410 356 aa3.29□□□□□ -1.88
PSEN1-211ENST00000554995 ZC3H13Q5T200 1668 aaKnown RBP3.29□□□□□ -1.88
PSEN1-211ENST00000554995 MYO3AQ8NEV4 1616 aa3.29□□□□□ -1.88
PSEN1-211ENST00000554995 TRPM2O94759 1503 aa3.29□□□□□ -1.88
PSEN1-211ENST00000554995 ATP7AQ04656 1500 aa3.29□□□□□ -1.88
PSEN1-211ENST00000554995 A2ML1A8K2U0 1454 aa3.28□□□□□ -1.88
PSEN1-211ENST00000554995 MED14O60244 1454 aa3.28□□□□□ -1.88
PSEN1-211ENST00000554995 ELP1O95163 1332 aa3.28□□□□□ -1.88
PSEN1-211ENST00000554995 IQGAP1P46940 1657 aa3.28□□□□□ -1.88
PSEN1-211ENST00000554995 LOC389332A0A1B0GUA5 103 aa3.28□□□□□ -1.88
PSEN1-211ENST00000554995 A8MWL6 223 aa3.28□□□□□ -1.88
PSEN1-211ENST00000554995 F8VZ95 297 aa3.28□□□□□ -1.88
PSEN1-211ENST00000554995 GOLGA8RI6L899 631 aa3.28□□□□□ -1.88
PSEN1-211ENST00000554995 UPK2O00526 184 aa3.28□□□□□ -1.88
PSEN1-211ENST00000554995 FABP7O15540 132 aa3.28□□□□□ -1.88
PSEN1-211ENST00000554995 OR2A4O95047 310 aa3.28□□□□□ -1.88
PSEN1-211ENST00000554995 MPZL1O95297 269 aa3.28□□□□□ -1.88
PSEN1-211ENST00000554995 TPM3P06753 285 aa3.28□□□□□ -1.88
PSEN1-211ENST00000554995 M6PRP20645 277 aa3.28□□□□□ -1.88
PSEN1-211ENST00000554995 TSPOP30536 169 aa3.28□□□□□ -1.88
PSEN1-211ENST00000554995 TPM4P67936 248 aa3.28□□□□□ -1.88
PSEN1-211ENST00000554995 BAXQ07812 192 aa3.28□□□□□ -1.88
PSEN1-211ENST00000554995 ZNF816Q0VGE8 651 aaPredicted RBP3.28□□□□□ -1.88
PSEN1-211ENST00000554995 LINC00303Q3SY05 128 aa3.28□□□□□ -1.88
PSEN1-211ENST00000554995 ATP6AP1LQ52LC2 224 aa3.28□□□□□ -1.88
PSEN1-211ENST00000554995 CLLU1OSQ5K130 101 aa3.28□□□□□ -1.88
PSEN1-211ENST00000554995 CLEC12AQ5QGZ9 265 aa3.28□□□□□ -1.88
PSEN1-211ENST00000554995 ACTL9Q8TC94 416 aa3.28□□□□□ -1.88
PSEN1-211ENST00000554995 CCL17Q92583 94 aa3.28□□□□□ -1.88
PSEN1-211ENST00000554995 STARD4Q96DR4 205 aa3.28□□□□□ -1.88
PSEN1-211ENST00000554995 FMC1Q96HJ9 113 aa3.28□□□□□ -1.88
PSEN1-211ENST00000554995 GPR82Q96P67 336 aa3.28□□□□□ -1.88
PSEN1-211ENST00000554995 RNF157Q96PX1 679 aa3.28□□□□□ -1.88
PSEN1-211ENST00000554995 OR2A7Q96R45 310 aa3.28□□□□□ -1.88
PSEN1-211ENST00000554995 ZNF251Q9BRH9 671 aa3.28□□□□□ -1.88
PSEN1-211ENST00000554995 PARP11Q9NR21 331 aa3.28□□□□□ -1.88
PSEN1-211ENST00000554995 RBM22Q9NW64 420 aaKnown RBP eCLIP3.28□□□□□ -1.88
PSEN1-211ENST00000554995 TAS2R13Q9NYV9 303 aa3.28□□□□□ -1.88
PSEN1-211ENST00000554995 NOSIPQ9Y314 301 aaKnown RBP3.28□□□□□ -1.88
PSEN1-211ENST00000554995 LMTK2Q8IWU2 1503 aa3.28□□□□□ -1.88
PSEN1-211ENST00000554995 KIDINS220Q9ULH0 1771 aa3.28□□□□□ -1.89
PSEN1-211ENST00000554995 ROCK2O75116 1388 aaKnown RBP3.27□□□□□ -1.89
PSEN1-211ENST00000554995 KTN1Q86UP2 1357 aaKnown RBP3.27□□□□□ -1.89
PSEN1-211ENST00000554995 MROH1Q8NDA8 1641 aa3.27□□□□□ -1.89
PSEN1-211ENST00000554995 TMEM213A2RRL7 107 aa3.27□□□□□ -1.89
PSEN1-211ENST00000554995 CBR3O75828 277 aa3.27□□□□□ -1.89
PSEN1-211ENST00000554995 CD28P10747 220 aa3.27□□□□□ -1.89
PSEN1-211ENST00000554995 LGALS7P47929 136 aa3.27□□□□□ -1.89
PSEN1-211ENST00000554995 PLTPP55058 493 aa3.27□□□□□ -1.89
PSEN1-211ENST00000554995 TMEM249Q2WGJ8 235 aa3.27□□□□□ -1.89
PSEN1-211ENST00000554995 Q499Y3 187 aa3.27□□□□□ -1.89
PSEN1-211ENST00000554995 KLHL12Q53G59 568 aa3.27□□□□□ -1.89
PSEN1-211ENST00000554995 FAM222AQ5U5X8 452 aa3.27□□□□□ -1.89
PSEN1-211ENST00000554995 SHISA6Q6ZSJ9 500 aa3.27□□□□□ -1.89
PSEN1-211ENST00000554995 USP50Q70EL3 339 aaPredicted RBP3.27□□□□□ -1.89
PSEN1-211ENST00000554995 ITPRIPQ8IWB1 547 aa3.27□□□□□ -1.89
PSEN1-211ENST00000554995 ACBD4Q8NC06 268 aa3.27□□□□□ -1.89
PSEN1-211ENST00000554995 FAM57AQ8TBR7 257 aa3.27□□□□□ -1.89
PSEN1-211ENST00000554995 ZNF514Q96K75 400 aaPredicted RBP3.27□□□□□ -1.89
PSEN1-211ENST00000554995 MFSD1Q9H3U5 465 aa3.27□□□□□ -1.89
PSEN1-211ENST00000554995 ZSCAN16Q9H4T2 348 aaPredicted RBP3.27□□□□□ -1.89
PSEN1-211ENST00000554995 RBM12B-AS1Q9P1G2 102 aa3.27□□□□□ -1.89
PSEN1-211ENST00000554995 XIRP1Q702N8 1843 aaKnown RBP3.27□□□□□ -1.89
PSEN1-211ENST00000554995 MROH2AA6NES4 1674 aa3.27□□□□□ -1.89
PSEN1-211ENST00000554995 REREQ9P2R6 1566 aa3.26□□□□□ -1.89
PSEN1-211ENST00000554995 EFCAB6Q5THR3 1501 aa3.26□□□□□ -1.89
PSEN1-211ENST00000554995 ZNF850A8MQ14 1090 aa3.26□□□□□ -1.89
PSEN1-211ENST00000554995 FFAR1O14842 300 aa3.26□□□□□ -1.89
PSEN1-211ENST00000554995 MAGEB4O15481 346 aaPredicted RBP3.26□□□□□ -1.89
PSEN1-211ENST00000554995 SEC11BP0C7V7 166 aa3.26□□□□□ -1.89
PSEN1-211ENST00000554995 CCL23P55773 120 aa3.26□□□□□ -1.89
PSEN1-211ENST00000554995 UBE2G2P60604 165 aa3.26□□□□□ -1.89
PSEN1-211ENST00000554995 MEF2CQ06413 473 aaPredicted RBP3.26□□□□□ -1.89
PSEN1-211ENST00000554995 COTL1Q14019 142 aa3.26□□□□□ -1.89
PSEN1-211ENST00000554995 LCE3EQ5T5B0 92 aa3.26□□□□□ -1.89
PSEN1-211ENST00000554995 MORN3Q6PF18 240 aaPredicted RBP3.26□□□□□ -1.89
PSEN1-211ENST00000554995 TPGS1Q6ZTW0 290 aa3.26□□□□□ -1.89
PSEN1-211ENST00000554995 FAM9CQ8IZT9 166 aa3.26□□□□□ -1.89
PSEN1-211ENST00000554995 SPANXA2-OT1Q8N9U9 137 aa3.26□□□□□ -1.89
PSEN1-211ENST00000554995 SLC26A10Q8NG04 563 aa3.26□□□□□ -1.89
PSEN1-211ENST00000554995 FAM45AQ8TCE6 357 aa3.26□□□□□ -1.89
PSEN1-211ENST00000554995 YIPF6Q96EC8 236 aa3.26□□□□□ -1.89
PSEN1-211ENST00000554995 DERL3Q96Q80 235 aa3.26□□□□□ -1.89
PSEN1-211ENST00000554995 HBEGFQ99075 208 aa3.26□□□□□ -1.89
PSEN1-211ENST00000554995 PITX2Q99697 317 aa3.26□□□□□ -1.89
PSEN1-211ENST00000554995 POMKQ9H5K3 350 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms