RNA–Protein interactions for RNA: ENST00000554308.5

PPP4R3A-201, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5

Gene PPP4R3A, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-201ENST00000554308 FCGR2CP31995 323 aa12.66□□□□□ -0.38
PPP4R3A-201ENST00000554308 AWAT1Q58HT5 328 aa12.66□□□□□ -0.38
PPP4R3A-201ENST00000554308 NAXEQ8NCW5 288 aa12.66□□□□□ -0.38
PPP4R3A-201ENST00000554308 SEMA6DQ8NFY4 1073 aa12.66□□□□□ -0.38
PPP4R3A-201ENST00000554308 KCNG3Q8TAE7 436 aa12.66□□□□□ -0.38
PPP4R3A-201ENST00000554308 ERGIC1Q969X5 290 aa12.66□□□□□ -0.38
PPP4R3A-201ENST00000554308 OCSTAMPQ9BR26 566 aa12.66□□□□□ -0.38
PPP4R3A-201ENST00000554308 COL25A1Q9BXS0 654 aaPredicted RBP12.66□□□□□ -0.38
PPP4R3A-201ENST00000554308 ZDHHC11Q9H8X9 412 aa12.66□□□□□ -0.38
PPP4R3A-201ENST00000554308 NIT2Q9NQR4 276 aa12.66□□□□□ -0.38
PPP4R3A-201ENST00000554308 GPR173Q9NS66 373 aa12.66□□□□□ -0.38
PPP4R3A-201ENST00000554308 V9GYS6 101 aa12.66□□□□□ -0.38
PPP4R3A-201ENST00000554308 SLC22A20A6NK97 555 aa12.65□□□□□ -0.38
PPP4R3A-201ENST00000554308 MMP7P09237 267 aaPredicted RBP12.65□□□□□ -0.38
PPP4R3A-201ENST00000554308 TMEM33P57088 247 aa12.65□□□□□ -0.38
PPP4R3A-201ENST00000554308 RNPS1Q15287 305 aaKnown RBP12.65□□□□□ -0.38
PPP4R3A-201ENST00000554308 KRBOX4Q5JUW0 171 aa12.65□□□□□ -0.38
PPP4R3A-201ENST00000554308 ASCL5Q7RTU5 278 aa12.65□□□□□ -0.38
PPP4R3A-201ENST00000554308 OR51T1Q8NGJ9 327 aa12.65□□□□□ -0.38
PPP4R3A-201ENST00000554308 NUDT16L1Q9BRJ7 211 aaKnown RBP12.65□□□□□ -0.38
PPP4R3A-201ENST00000554308 EGLN1Q9GZT9 426 aa12.65□□□□□ -0.38
PPP4R3A-201ENST00000554308 DNAJB11Q9UBS4 358 aa12.65□□□□□ -0.38
PPP4R3A-201ENST00000554308 PRSS50Q9UI38 385 aa12.65□□□□□ -0.38
PPP4R3A-201ENST00000554308 LSM5Q9Y4Y9 91 aaKnown RBP12.65□□□□□ -0.38
PPP4R3A-201ENST00000554308 ZNF503-AS2A6NEH8 195 aa12.65□□□□□ -0.38
PPP4R3A-201ENST00000554308 SCGB1D2O95969 90 aa12.65□□□□□ -0.38
PPP4R3A-201ENST00000554308 DVL1P1P54792 670 aaPredicted RBP12.65□□□□□ -0.38
PPP4R3A-201ENST00000554308 FABP9Q0Z7S8 132 aa12.65□□□□□ -0.38
PPP4R3A-201ENST00000554308 C15orf54Q8N8G6 183 aa12.65□□□□□ -0.38
PPP4R3A-201ENST00000554308 CNTNAP3Q9BZ76 1288 aa12.65□□□□□ -0.38
PPP4R3A-201ENST00000554308 TRBV23-1A0A0A0MS06 115 aa12.64□□□□□ -0.39
PPP4R3A-201ENST00000554308 C7orf77A4D0Y5 90 aa12.64□□□□□ -0.39
PPP4R3A-201ENST00000554308 ZNF724A8MTY0 619 aa12.64□□□□□ -0.39
PPP4R3A-201ENST00000554308 K7EPK0 472 aa12.64□□□□□ -0.39
PPP4R3A-201ENST00000554308 C1QL1O75973 258 aa12.64□□□□□ -0.39
PPP4R3A-201ENST00000554308 CST4P01036 141 aa12.64□□□□□ -0.39
PPP4R3A-201ENST00000554308 S100A6P06703 90 aa12.64□□□□□ -0.39
PPP4R3A-201ENST00000554308 ACTBL2Q562R1 376 aa12.64□□□□□ -0.39
PPP4R3A-201ENST00000554308 GCNT2Q8N0V5 402 aa12.64□□□□□ -0.39
PPP4R3A-201ENST00000554308 FAM71E2Q8N5Q1 922 aa12.64□□□□□ -0.39
PPP4R3A-201ENST00000554308 PP6455Q8WZ26 134 aa12.64□□□□□ -0.39
PPP4R3A-201ENST00000554308 MRPL24Q96A35 216 aaKnown RBP12.64□□□□□ -0.39
PPP4R3A-201ENST00000554308 PRRX2Q99811 253 aa12.64□□□□□ -0.39
PPP4R3A-201ENST00000554308 HDHD3Q9BSH5 251 aaPredicted RBP12.64□□□□□ -0.39
PPP4R3A-201ENST00000554308 LINC00470Q9BZP3 86 aa12.64□□□□□ -0.39
PPP4R3A-201ENST00000554308 CHST5Q9GZS9 411 aa12.64□□□□□ -0.39
PPP4R3A-201ENST00000554308 PARP11Q9NR21 331 aa12.64□□□□□ -0.39
PPP4R3A-201ENST00000554308 APC2O95996 2303 aa12.64□□□□□ -0.39
PPP4R3A-201ENST00000554308 A0A1B0GV50 99 aa12.64□□□□□ -0.39
PPP4R3A-201ENST00000554308 FAM230AA0A1W2PPH8 454 aa12.64□□□□□ -0.39
PPP4R3A-201ENST00000554308 UBE2CO00762 179 aa12.64□□□□□ -0.39
PPP4R3A-201ENST00000554308 THBS4P35443 961 aa12.64□□□□□ -0.39
PPP4R3A-201ENST00000554308 ZNF92Q03936 586 aa12.64□□□□□ -0.39
PPP4R3A-201ENST00000554308 MIDNQ504T8 468 aa12.64□□□□□ -0.39
PPP4R3A-201ENST00000554308 CRIP3Q6Q6R5 217 aa12.64□□□□□ -0.39
PPP4R3A-201ENST00000554308 OR56B1Q8NGI3 324 aa12.64□□□□□ -0.39
PPP4R3A-201ENST00000554308 GHRLQ9UBU3 117 aa12.64□□□□□ -0.39
PPP4R3A-201ENST00000554308 C5orf49A4QMS7 147 aa12.63□□□□□ -0.39
PPP4R3A-201ENST00000554308 M0R036 132 aa12.63□□□□□ -0.39
PPP4R3A-201ENST00000554308 TXNL1O43396 289 aa12.63□□□□□ -0.39
PPP4R3A-201ENST00000554308 ARG1P05089 322 aa12.63□□□□□ -0.39
PPP4R3A-201ENST00000554308 PET100P0DJ07 73 aa12.63□□□□□ -0.39
PPP4R3A-201ENST00000554308 SERPINA2P20848 420 aa12.63□□□□□ -0.39
PPP4R3A-201ENST00000554308 BLVRBP30043 206 aaPredicted RBP12.63□□□□□ -0.39
PPP4R3A-201ENST00000554308 MTCP1P56278 107 aa12.63□□□□□ -0.39
PPP4R3A-201ENST00000554308 POLR2GP62487 172 aaKnown RBP eCLIP12.63□□□□□ -0.39
PPP4R3A-201ENST00000554308 SPACA1Q9HBV2 294 aa12.63□□□□□ -0.39
PPP4R3A-201ENST00000554308 ZNF701Q9NV72 531 aaPredicted RBP12.63□□□□□ -0.39
PPP4R3A-201ENST00000554308 ACACAQ13085 2346 aa12.63□□□□□ -0.39
PPP4R3A-201ENST00000554308 NBEAQ8NFP9 2946 aa12.63□□□□□ -0.39
PPP4R3A-201ENST00000554308 KLK10O43240 276 aa12.63□□□□□ -0.39
PPP4R3A-201ENST00000554308 SMIM6P0DI80 62 aa12.63□□□□□ -0.39
PPP4R3A-201ENST00000554308 NQO2P16083 231 aa12.63□□□□□ -0.39
PPP4R3A-201ENST00000554308 SPINK2P20155 84 aa12.63□□□□□ -0.39
PPP4R3A-201ENST00000554308 RAB1AP62820 205 aa12.63□□□□□ -0.39
PPP4R3A-201ENST00000554308 ZNF616Q08AN1 781 aa12.63□□□□□ -0.39
PPP4R3A-201ENST00000554308 HIKESHIQ53FT3 197 aa12.63□□□□□ -0.39
PPP4R3A-201ENST00000554308 EIF5AL1Q6IS14 154 aaKnown RBP12.63□□□□□ -0.39
PPP4R3A-201ENST00000554308 IGF2-ASQ6U949 168 aa12.63□□□□□ -0.39
PPP4R3A-201ENST00000554308 P4HA3Q7Z4N8 544 aa12.63□□□□□ -0.39
PPP4R3A-201ENST00000554308 S100A13Q99584 98 aa12.63□□□□□ -0.39
PPP4R3A-201ENST00000554308 WFDC1Q9HC57 220 aa12.63□□□□□ -0.39
PPP4R3A-201ENST00000554308 TRAV17A0A0B4J275 112 aa12.62□□□□□ -0.39
PPP4R3A-201ENST00000554308 DHRS7CA6NNS2 312 aa12.62□□□□□ -0.39
PPP4R3A-201ENST00000554308 ZNF891A8MT65 544 aaPredicted RBP12.62□□□□□ -0.39
PPP4R3A-201ENST00000554308 TAAR5O14804 337 aa12.62□□□□□ -0.39
PPP4R3A-201ENST00000554308 IFNA2P01563 188 aa12.62□□□□□ -0.39
PPP4R3A-201ENST00000554308 GLI4P10075 376 aa12.62□□□□□ -0.39
PPP4R3A-201ENST00000554308 ZNF14P17017 642 aaPredicted RBP12.62□□□□□ -0.39
PPP4R3A-201ENST00000554308 AGAP20933 346 aa12.62□□□□□ -0.39
PPP4R3A-201ENST00000554308 OR2B8PP59922 312 aa12.62□□□□□ -0.39
PPP4R3A-201ENST00000554308 CHRFAM7AQ494W8 412 aa12.62□□□□□ -0.39
PPP4R3A-201ENST00000554308 SSC4DQ8WTU2 575 aa12.62□□□□□ -0.39
PPP4R3A-201ENST00000554308 ZNF251Q9BRH9 671 aa12.62□□□□□ -0.39
PPP4R3A-201ENST00000554308 SCRT1Q9BWW7 348 aa12.62□□□□□ -0.39
PPP4R3A-201ENST00000554308 PECRQ9BY49 303 aa12.62□□□□□ -0.39
PPP4R3A-201ENST00000554308 ZNF581Q9P0T4 197 aa12.62□□□□□ -0.39
PPP4R3A-201ENST00000554308 BSNQ9UPA5 3926 aa12.62□□□□□ -0.39
PPP4R3A-201ENST00000554308 RPL36A-HNRNPH2H7BZ11 118 aa12.62□□□□□ -0.39
PPP4R3A-201ENST00000554308 MSTNO14793 375 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms