RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 UNC119Q13432 240 aa5.12□□□□□ -1.59
VPS33B-203ENST00000554264 ARFRP1Q13795 201 aa5.12□□□□□ -1.59
VPS33B-203ENST00000554264 IL13RA2Q14627 380 aa5.12□□□□□ -1.59
VPS33B-203ENST00000554264 KCNAB1Q14722 419 aa5.12□□□□□ -1.59
VPS33B-203ENST00000554264 ATXN7L3Q14CW9 347 aaPredicted RBP5.12□□□□□ -1.59
VPS33B-203ENST00000554264 EBPQ15125 230 aaKnown RBP5.12□□□□□ -1.59
VPS33B-203ENST00000554264 ZNF239Q16600 458 aaKnown RBP5.12□□□□□ -1.59
VPS33B-203ENST00000554264 CHRFAM7AQ494W8 412 aa5.12□□□□□ -1.59
VPS33B-203ENST00000554264 GXYLT1Q4G148 440 aa5.12□□□□□ -1.59
VPS33B-203ENST00000554264 TMEM268Q5VZI3 342 aa5.12□□□□□ -1.59
VPS33B-203ENST00000554264 CORO6Q6QEF8 472 aa5.12□□□□□ -1.59
VPS33B-203ENST00000554264 CBLN3Q6UW01 205 aa5.12□□□□□ -1.59
VPS33B-203ENST00000554264 BTNL8Q6UX41 500 aa5.12□□□□□ -1.59
VPS33B-203ENST00000554264 UNQ6126/PRO20091Q6UXV3 157 aa5.12□□□□□ -1.59
VPS33B-203ENST00000554264 DPPA3Q6W0C5 159 aa5.12□□□□□ -1.59
VPS33B-203ENST00000554264 Q6ZS92 163 aa5.12□□□□□ -1.59
VPS33B-203ENST00000554264 SLC35D2Q76EJ3 337 aa5.12□□□□□ -1.59
VPS33B-203ENST00000554264 SGPP2Q8IWX5 399 aa5.12□□□□□ -1.59
VPS33B-203ENST00000554264 ZNF101Q8IZC7 436 aa5.12□□□□□ -1.59
VPS33B-203ENST00000554264 LRTM2Q8N967 370 aa5.12□□□□□ -1.59
VPS33B-203ENST00000554264 ZSCAN4Q8NAM6 433 aaPredicted RBP5.12□□□□□ -1.59
VPS33B-203ENST00000554264 OR9K2Q8NGE7 335 aa5.12□□□□□ -1.59
VPS33B-203ENST00000554264 OR4A4PQ8NGN8 299 aa5.12□□□□□ -1.59
VPS33B-203ENST00000554264 OR1N1Q8NGS0 311 aa5.12□□□□□ -1.59
VPS33B-203ENST00000554264 MARCH1Q8TCQ1 289 aa5.12□□□□□ -1.59
VPS33B-203ENST00000554264 RXFP4Q8TDU9 374 aa5.12□□□□□ -1.59
VPS33B-203ENST00000554264 GPR119Q8TDV5 335 aa5.12□□□□□ -1.59
VPS33B-203ENST00000554264 PTPMT1Q8WUK0 201 aaPredicted RBP5.12□□□□□ -1.59
VPS33B-203ENST00000554264 ZNF501Q96CX3 271 aaPredicted RBP5.12□□□□□ -1.59
VPS33B-203ENST00000554264 SLAMF6Q96DU3 332 aa5.12□□□□□ -1.59
VPS33B-203ENST00000554264 RNF126Q9BV68 326 aa5.12□□□□□ -1.59
VPS33B-203ENST00000554264 TM2D1Q9BX74 207 aa5.12□□□□□ -1.59
VPS33B-203ENST00000554264 SUCNR1Q9BXA5 334 aa5.12□□□□□ -1.59
VPS33B-203ENST00000554264 WWTR1Q9GZV5 400 aa5.12□□□□□ -1.59
VPS33B-203ENST00000554264 PBOV1Q9GZY1 135 aa5.12□□□□□ -1.59
VPS33B-203ENST00000554264 NXF5Q9H1B4 397 aaKnown RBP5.12□□□□□ -1.59
VPS33B-203ENST00000554264 LPAR5Q9H1C0 372 aa5.12□□□□□ -1.59
VPS33B-203ENST00000554264 HIPK2Q9H2X6 1198 aa5.12□□□□□ -1.59
VPS33B-203ENST00000554264 OR51M1Q9H341 326 aa5.12□□□□□ -1.59
VPS33B-203ENST00000554264 RGCCQ9H4X1 137 aa5.12□□□□□ -1.59
VPS33B-203ENST00000554264 CHST11Q9NPF2 352 aa5.12□□□□□ -1.59
VPS33B-203ENST00000554264 SERINC1Q9NRX5 453 aa5.12□□□□□ -1.59
VPS33B-203ENST00000554264 DECR2Q9NUI1 292 aa5.12□□□□□ -1.59
VPS33B-203ENST00000554264 ZNF391Q9UJN7 358 aa5.12□□□□□ -1.59
VPS33B-203ENST00000554264 OSGIN2Q9Y236 505 aa5.12□□□□□ -1.59
VPS33B-203ENST00000554264 RPH3AQ9Y2J0 694 aaPredicted RBP5.12□□□□□ -1.59
VPS33B-203ENST00000554264 KCNIP3Q9Y2W7 256 aa5.12□□□□□ -1.59
VPS33B-203ENST00000554264 NSG2Q9Y328 171 aa5.12□□□□□ -1.59
VPS33B-203ENST00000554264 STARD10Q9Y365 291 aa5.12□□□□□ -1.59
VPS33B-203ENST00000554264 TMED3Q9Y3Q3 217 aa5.12□□□□□ -1.59
VPS33B-203ENST00000554264 LRBAP50851 2863 aa5.12□□□□□ -1.59
VPS33B-203ENST00000554264 F8P00451 2351 aa5.12□□□□□ -1.59
VPS33B-203ENST00000554264 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.11□□□□□ -1.59
VPS33B-203ENST00000554264 A0A0U1RQV5 110 aa5.11□□□□□ -1.59
VPS33B-203ENST00000554264 A0A1B0GTH9 108 aa5.11□□□□□ -1.59
VPS33B-203ENST00000554264 LOC102725191A0A1B0GVB3 256 aa5.11□□□□□ -1.59
VPS33B-203ENST00000554264 DUXBA0A1W2PPF3 345 aa5.11□□□□□ -1.59
VPS33B-203ENST00000554264 MEX3AA1L020 520 aaKnown RBP5.11□□□□□ -1.59
VPS33B-203ENST00000554264 B4DEV8 164 aa5.11□□□□□ -1.59
VPS33B-203ENST00000554264 C11orf98E9PRG8 122 aa5.11□□□□□ -1.59
VPS33B-203ENST00000554264 CCSO14618 274 aa5.11□□□□□ -1.59
VPS33B-203ENST00000554264 ICOSLGO75144 302 aa5.11□□□□□ -1.59
VPS33B-203ENST00000554264 DEDDO75618 318 aa5.11□□□□□ -1.59
VPS33B-203ENST00000554264 IGHG1P01857 330 aa5.11□□□□□ -1.59
VPS33B-203ENST00000554264 TTRP02766 147 aa5.11□□□□□ -1.59
VPS33B-203ENST00000554264 GLAP06280 429 aa5.11□□□□□ -1.59
VPS33B-203ENST00000554264 CD63P08962 238 aa5.11□□□□□ -1.59
VPS33B-203ENST00000554264 MMP9P14780 707 aa5.11□□□□□ -1.59
VPS33B-203ENST00000554264 COX6B1P14854 86 aa5.11□□□□□ -1.59
VPS33B-203ENST00000554264 MUC1P15941 1255 aaPredicted RBP5.11□□□□□ -1.59
VPS33B-203ENST00000554264 ZNF14P17017 642 aaPredicted RBP5.11□□□□□ -1.59
VPS33B-203ENST00000554264 DTYMKP23919 212 aa5.11□□□□□ -1.59
VPS33B-203ENST00000554264 RPL12P30050 165 aaKnown RBP5.11□□□□□ -1.59
VPS33B-203ENST00000554264 GUCA1AP43080 201 aaPredicted RBP5.11□□□□□ -1.59
VPS33B-203ENST00000554264 P2RY1P47900 373 aa5.11□□□□□ -1.59
VPS33B-203ENST00000554264 NPBWR1P48145 328 aa5.11□□□□□ -1.59
VPS33B-203ENST00000554264 GABRA4P48169 554 aa5.11□□□□□ -1.59
VPS33B-203ENST00000554264 KCNJ3P48549 501 aa5.11□□□□□ -1.59
VPS33B-203ENST00000554264 PPP1CAP62136 330 aa5.11□□□□□ -1.59
VPS33B-203ENST00000554264 LSM6P62312 80 aaKnown RBP5.11□□□□□ -1.59
VPS33B-203ENST00000554264 HSF1Q00613 529 aa5.11□□□□□ -1.59
VPS33B-203ENST00000554264 ZNF266Q14584 549 aa5.11□□□□□ -1.59
VPS33B-203ENST00000554264 MELKQ14680 651 aa5.11□□□□□ -1.59
VPS33B-203ENST00000554264 ODF4Q2M2E3 257 aa5.11□□□□□ -1.59
VPS33B-203ENST00000554264 KRTAP15-1Q3LI76 137 aa5.11□□□□□ -1.59
VPS33B-203ENST00000554264 SLC25A53Q5H9E4 307 aa5.11□□□□□ -1.59
VPS33B-203ENST00000554264 DCAF10Q5QP82 559 aa5.11□□□□□ -1.59
VPS33B-203ENST00000554264 LCN10Q6JVE6 187 aa5.11□□□□□ -1.59
VPS33B-203ENST00000554264 TMEM88Q6PEY1 159 aa5.11□□□□□ -1.59
VPS33B-203ENST00000554264 GLIPR1L1Q6UWM5 242 aa5.11□□□□□ -1.59
VPS33B-203ENST00000554264 Q6ZSR3 168 aa5.11□□□□□ -1.59
VPS33B-203ENST00000554264 SLC16A14Q7RTX9 510 aa5.11□□□□□ -1.59
VPS33B-203ENST00000554264 CBLN2Q8IUK8 224 aa5.11□□□□□ -1.59
VPS33B-203ENST00000554264 FAM185AQ8N0U4 392 aa5.11□□□□□ -1.59
VPS33B-203ENST00000554264 LRRC18Q8N456 261 aa5.11□□□□□ -1.59
VPS33B-203ENST00000554264 ZNF441Q8N8Z8 693 aa5.11□□□□□ -1.59
VPS33B-203ENST00000554264 CCDC71LQ8N9Z2 235 aa5.11□□□□□ -1.59
VPS33B-203ENST00000554264 SLC38A9Q8NBW4 561 aa5.11□□□□□ -1.59
VPS33B-203ENST00000554264 OR4S1Q8NGB4 309 aa5.11□□□□□ -1.59
VPS33B-203ENST00000554264 OR13D1Q8NGV5 346 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms