RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 NIPAL2Q9H841 368 aa5.27□□□□□ -1.57
ATXN3-224ENST00000554040 PCDHB16Q9NRJ7 776 aa5.27□□□□□ -1.57
ATXN3-224ENST00000554040 NKIRAS1Q9NYS0 192 aa5.27□□□□□ -1.57
ATXN3-224ENST00000554040 UBE2J1Q9Y385 318 aaPredicted RBP5.27□□□□□ -1.57
ATXN3-224ENST00000554040 FAM32AQ9Y421 112 aaKnown RBP5.27□□□□□ -1.57
ATXN3-224ENST00000554040 COX11Q9Y6N1 276 aa5.27□□□□□ -1.57
ATXN3-224ENST00000554040 FAM172BPA6NC97 362 aa5.26□□□□□ -1.57
ATXN3-224ENST00000554040 NRASP01111 189 aa5.26□□□□□ -1.57
ATXN3-224ENST00000554040 NPPAP01160 153 aa5.26□□□□□ -1.57
ATXN3-224ENST00000554040 H2BFMP0C1H6 154 aa5.26□□□□□ -1.57
ATXN3-224ENST00000554040 ATP6V1B1P15313 513 aa5.26□□□□□ -1.57
ATXN3-224ENST00000554040 RHCEP18577 417 aa5.26□□□□□ -1.57
ATXN3-224ENST00000554040 CDK2P24941 298 aa5.26□□□□□ -1.57
ATXN3-224ENST00000554040 MPZP25189 248 aa5.26□□□□□ -1.57
ATXN3-224ENST00000554040 PEX2P28328 305 aa5.26□□□□□ -1.57
ATXN3-224ENST00000554040 ERP29P30040 261 aaKnown RBP5.26□□□□□ -1.57
ATXN3-224ENST00000554040 KIR3DL2P43630 455 aa5.26□□□□□ -1.57
ATXN3-224ENST00000554040 BLVRAP53004 296 aa5.26□□□□□ -1.57
ATXN3-224ENST00000554040 RBM39Q14498 530 aaKnown RBP5.26□□□□□ -1.57
ATXN3-224ENST00000554040 GRK1Q15835 563 aa5.26□□□□□ -1.57
ATXN3-224ENST00000554040 C19orf54Q5BKX5 351 aa5.26□□□□□ -1.57
ATXN3-224ENST00000554040 CT83Q5H943 113 aa5.26□□□□□ -1.57
ATXN3-224ENST00000554040 ACSM6Q6P461 480 aa5.26□□□□□ -1.57
ATXN3-224ENST00000554040 TGIF2LXQ8IUE1 241 aa5.26□□□□□ -1.57
ATXN3-224ENST00000554040 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.26□□□□□ -1.57
ATXN3-224ENST00000554040 ZNF491Q8N8L2 437 aa5.26□□□□□ -1.57
ATXN3-224ENST00000554040 SLC37A3Q8NCC5 494 aa5.26□□□□□ -1.57
ATXN3-224ENST00000554040 OR8B12Q8NGG6 310 aa5.26□□□□□ -1.57
ATXN3-224ENST00000554040 OR52N4Q8NGI2 321 aa5.26□□□□□ -1.57
ATXN3-224ENST00000554040 OR56B4Q8NH76 319 aa5.26□□□□□ -1.57
ATXN3-224ENST00000554040 MYOZ3Q8TDC0 251 aa5.26□□□□□ -1.57
ATXN3-224ENST00000554040 CHAC2Q8WUX2 184 aa5.26□□□□□ -1.57
ATXN3-224ENST00000554040 DLX4Q92988 240 aaPredicted RBP5.26□□□□□ -1.57
ATXN3-224ENST00000554040 ZBTB9Q96C00 473 aa5.26□□□□□ -1.57
ATXN3-224ENST00000554040 AMELYQ99218 206 aa5.26□□□□□ -1.57
ATXN3-224ENST00000554040 ABCG5Q9H222 651 aa5.26□□□□□ -1.57
ATXN3-224ENST00000554040 SEBOXQ9HB31 216 aaPredicted RBP5.26□□□□□ -1.57
ATXN3-224ENST00000554040 ZNF286AQ9HBT8 521 aa5.26□□□□□ -1.57
ATXN3-224ENST00000554040 DCAF13Q9NV06 445 aaKnown RBP5.26□□□□□ -1.57
ATXN3-224ENST00000554040 CHCHD3Q9NX63 227 aaKnown RBP5.26□□□□□ -1.57
ATXN3-224ENST00000554040 NDUFAF4Q9P032 175 aa5.26□□□□□ -1.57
ATXN3-224ENST00000554040 KIAA1456Q9P272 454 aa5.26□□□□□ -1.57
ATXN3-224ENST00000554040 DNAJB9Q9UBS3 223 aa5.26□□□□□ -1.57
ATXN3-224ENST00000554040 VSIG4Q9Y279 399 aa5.26□□□□□ -1.57
ATXN3-224ENST00000554040 HSPG2P98160 4391 aa5.25□□□□□ -1.57
ATXN3-224ENST00000554040 DSCAML1Q8TD84 2053 aa5.25□□□□□ -1.57
ATXN3-224ENST00000554040 A0A087X0M5 115 aa5.25□□□□□ -1.57
ATXN3-224ENST00000554040 A0A0U1RQV5 110 aa5.25□□□□□ -1.57
ATXN3-224ENST00000554040 A0A1B0GX30 115 aa5.25□□□□□ -1.57
ATXN3-224ENST00000554040 A0A1W2PPI3 338 aa5.25□□□□□ -1.57
ATXN3-224ENST00000554040 PQLC2LA1A4F0 135 aa5.25□□□□□ -1.57
ATXN3-224ENST00000554040 NCBP2LA6PVI3 153 aaKnown RBP5.25□□□□□ -1.57
ATXN3-224ENST00000554040 DIRC3C9JPN6 131 aa5.25□□□□□ -1.57
ATXN3-224ENST00000554040 HSPA12AO43301 675 aa5.25□□□□□ -1.57
ATXN3-224ENST00000554040 RRP9O43818 475 aaKnown RBP5.25□□□□□ -1.57
ATXN3-224ENST00000554040 IGKV1D-33P01593 117 aa5.25□□□□□ -1.57
ATXN3-224ENST00000554040 IGKV1-33P01594 117 aa5.25□□□□□ -1.57
ATXN3-224ENST00000554040 GYPBP06028 91 aa5.25□□□□□ -1.57
ATXN3-224ENST00000554040 CLUP10909 449 aa5.25□□□□□ -1.57
ATXN3-224ENST00000554040 ARSBP15848 533 aa5.25□□□□□ -1.57
ATXN3-224ENST00000554040 SPI1P17947 270 aa5.25□□□□□ -1.57
ATXN3-224ENST00000554040 VDAC1P21796 283 aa5.25□□□□□ -1.57
ATXN3-224ENST00000554040 GSSP48637 474 aa5.25□□□□□ -1.57
ATXN3-224ENST00000554040 ISL1P61371 349 aa5.25□□□□□ -1.57
ATXN3-224ENST00000554040 GNB1P62873 340 aa5.25□□□□□ -1.57
ATXN3-224ENST00000554040 EBI3Q14213 229 aa5.25□□□□□ -1.57
ATXN3-224ENST00000554040 KPNB1Q14974 876 aaKnown RBP5.25□□□□□ -1.57
ATXN3-224ENST00000554040 ZNF684Q5T5D7 378 aa5.25□□□□□ -1.57
ATXN3-224ENST00000554040 LINC01590Q5TEZ4 76 aa5.25□□□□□ -1.57
ATXN3-224ENST00000554040 RNLSQ5VYX0 342 aa5.25□□□□□ -1.57
ATXN3-224ENST00000554040 FAM53AQ6NSI3 398 aaPredicted RBP5.25□□□□□ -1.57
ATXN3-224ENST00000554040 ASRGL1Q7L266 308 aa5.25□□□□□ -1.57
ATXN3-224ENST00000554040 SHFQ7M4L6 423 aa5.25□□□□□ -1.57
ATXN3-224ENST00000554040 TRAPPC6BQ86SZ2 158 aa5.25□□□□□ -1.57
ATXN3-224ENST00000554040 ANGPTL5Q86XS5 388 aa5.25□□□□□ -1.57
ATXN3-224ENST00000554040 OR6K6Q8NGW6 343 aa5.25□□□□□ -1.57
ATXN3-224ENST00000554040 OR6N2Q8NGY6 317 aa5.25□□□□□ -1.57
ATXN3-224ENST00000554040 STON2Q8WXE9 905 aa5.25□□□□□ -1.57
ATXN3-224ENST00000554040 CORO2AQ92828 525 aa5.25□□□□□ -1.57
ATXN3-224ENST00000554040 TOMM40LQ969M1 308 aa5.25□□□□□ -1.57
ATXN3-224ENST00000554040 KCTD7Q96MP8 289 aa5.25□□□□□ -1.57
ATXN3-224ENST00000554040 INTS14Q96SY0 518 aa5.25□□□□□ -1.57
ATXN3-224ENST00000554040 NABP2Q9BQ15 211 aa5.25□□□□□ -1.57
ATXN3-224ENST00000554040 ST6GALNAC5Q9BVH7 336 aa5.25□□□□□ -1.57
ATXN3-224ENST00000554040 NMNAT2Q9BZQ4 307 aa5.25□□□□□ -1.57
ATXN3-224ENST00000554040 CHST6Q9GZX3 395 aa5.25□□□□□ -1.57
ATXN3-224ENST00000554040 KLK15Q9H2R5 256 aa5.25□□□□□ -1.57
ATXN3-224ENST00000554040 HIPK2Q9H2X6 1198 aa5.25□□□□□ -1.57
ATXN3-224ENST00000554040 GAL3ST2Q9H3Q3 398 aa5.25□□□□□ -1.57
ATXN3-224ENST00000554040 TUBA4BQ9H853 241 aa5.25□□□□□ -1.57
ATXN3-224ENST00000554040 GNB4Q9HAV0 340 aa5.25□□□□□ -1.57
ATXN3-224ENST00000554040 RETNQ9HD89 108 aa5.25□□□□□ -1.57
ATXN3-224ENST00000554040 LIN7CQ9NUP9 197 aaKnown RBP5.25□□□□□ -1.57
ATXN3-224ENST00000554040 TAS2R3Q9NYW6 316 aa5.25□□□□□ -1.57
ATXN3-224ENST00000554040 GLS2Q9UI32 602 aa5.25□□□□□ -1.57
ATXN3-224ENST00000554040 ENPP5Q9UJA9 477 aa5.25□□□□□ -1.57
ATXN3-224ENST00000554040 PIGLQ9Y2B2 252 aa5.25□□□□□ -1.57
ATXN3-224ENST00000554040 TRGV10A0A0A0MS01 117 aa5.24□□□□□ -1.57
ATXN3-224ENST00000554040 ACOD1A6NK06 481 aa5.24□□□□□ -1.57
ATXN3-224ENST00000554040 B5MCH6 92 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms