RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 RPF2Q9H7B2 306 aaKnown RBP1.54□□□□□ -2.16
VRK1-202ENST00000553683 WFDC1Q9HC57 220 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 DYRK4Q9NR20 520 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 LYARQ9NX58 379 aaKnown RBP1.54□□□□□ -2.16
VRK1-202ENST00000553683 MAT2BQ9NZL9 334 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 DNAJC12Q9UKB3 198 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 PITPNC1Q9UKF7 332 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 ALG5Q9Y673 324 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 ARHGEF10O15013 1369 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 TTC37Q6PGP7 1564 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 LRP6O75581 1613 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 ADCY10Q96PN6 1610 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 MAP3K4Q9Y6R4 1608 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 IGKV3D-11A0A0A0MRZ8 115 aa1.53□□□□□ -2.16
VRK1-202ENST00000553683 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.53□□□□□ -2.16
VRK1-202ENST00000553683 A0A1B0GTI1 187 aa1.53□□□□□ -2.16
VRK1-202ENST00000553683 A0A1B0GV72 72 aa1.53□□□□□ -2.16
VRK1-202ENST00000553683 SMIM31A0A1B0GVY4 71 aa1.53□□□□□ -2.16
VRK1-202ENST00000553683 A0A1W2PPV9 198 aa1.53□□□□□ -2.16
VRK1-202ENST00000553683 UHRF1BP1LA0JNW5 1464 aa1.53□□□□□ -2.16
VRK1-202ENST00000553683 FAM92AA1XBS5 289 aa1.53□□□□□ -2.16
VRK1-202ENST00000553683 C9J4A7 227 aa1.53□□□□□ -2.16
VRK1-202ENST00000553683 KPNA3O00505 521 aaPredicted RBP1.53□□□□□ -2.16
VRK1-202ENST00000553683 CXCR6O00574 342 aa1.53□□□□□ -2.16
VRK1-202ENST00000553683 SGCEO43556 437 aa1.53□□□□□ -2.16
VRK1-202ENST00000553683 PHLPP1O60346 1717 aa1.53□□□□□ -2.16
VRK1-202ENST00000553683 HUS1O60921 280 aa1.53□□□□□ -2.16
VRK1-202ENST00000553683 SC5DO75845 299 aa1.53□□□□□ -2.16
VRK1-202ENST00000553683 SULT1C4O75897 302 aa1.53□□□□□ -2.16
VRK1-202ENST00000553683 AQP8O94778 261 aa1.53□□□□□ -2.16
VRK1-202ENST00000553683 GLSO94925 669 aaPredicted RBP1.53□□□□□ -2.16
VRK1-202ENST00000553683 CDRT1O95170 752 aa1.53□□□□□ -2.16
VRK1-202ENST00000553683 C1orf105O95561 183 aa1.53□□□□□ -2.16
VRK1-202ENST00000553683 ETHE1O95571 254 aa1.53□□□□□ -2.16
VRK1-202ENST00000553683 TTC4O95801 387 aa1.53□□□□□ -2.16
VRK1-202ENST00000553683 IFNA10P01566 189 aa1.53□□□□□ -2.16
VRK1-202ENST00000553683 APCSP02743 223 aa1.53□□□□□ -2.16
VRK1-202ENST00000553683 CSNK2A2P19784 350 aaPredicted RBP1.53□□□□□ -2.16
VRK1-202ENST00000553683 OGNP20774 298 aaKnown RBP1.53□□□□□ -2.16
VRK1-202ENST00000553683 CD34P28906 385 aa1.53□□□□□ -2.16
VRK1-202ENST00000553683 SSTR5P35346 364 aa1.53□□□□□ -2.16
VRK1-202ENST00000553683 MAP2K4P45985 399 aa1.53□□□□□ -2.16
VRK1-202ENST00000553683 RPL5P46777 297 aaKnown RBP1.53□□□□□ -2.16
VRK1-202ENST00000553683 SERPINB10P48595 397 aa1.53□□□□□ -2.16
VRK1-202ENST00000553683 IDH3GP51553 393 aaPredicted RBP1.53□□□□□ -2.16
VRK1-202ENST00000553683 SNAP25P60880 206 aa1.53□□□□□ -2.16
VRK1-202ENST00000553683 CDC42P60953 191 aa1.53□□□□□ -2.16
VRK1-202ENST00000553683 FAM3AP98173 230 aa1.53□□□□□ -2.16
VRK1-202ENST00000553683 CPSF1Q10570 1443 aaKnown RBP1.53□□□□□ -2.16
VRK1-202ENST00000553683 GRIN2AQ12879 1464 aa1.53□□□□□ -2.16
VRK1-202ENST00000553683 SRSF6Q13247 344 aaKnown RBP1.53□□□□□ -2.16
VRK1-202ENST00000553683 WRNQ14191 1432 aaPredicted RBP eCLIP1.53□□□□□ -2.16
VRK1-202ENST00000553683 OR4D1Q15615 310 aa1.53□□□□□ -2.16
VRK1-202ENST00000553683 MRPL23Q16540 153 aaKnown RBP1.53□□□□□ -2.16
VRK1-202ENST00000553683 TMEM176BQ3YBM2 270 aaPredicted RBP1.53□□□□□ -2.16
VRK1-202ENST00000553683 FAM135BQ49AJ0 1406 aa1.53□□□□□ -2.16
VRK1-202ENST00000553683 LIN52Q52LA3 116 aa1.53□□□□□ -2.16
VRK1-202ENST00000553683 GCSAMLQ5JQS6 135 aa1.53□□□□□ -2.16
VRK1-202ENST00000553683 C9orf64Q5T6V5 341 aa1.53□□□□□ -2.16
VRK1-202ENST00000553683 N4BP2L1Q5TBK1 243 aaPredicted RBP1.53□□□□□ -2.16
VRK1-202ENST00000553683 C9orf135Q5VTT2 229 aa1.53□□□□□ -2.16
VRK1-202ENST00000553683 TMEM42Q69YG0 159 aa1.53□□□□□ -2.16
VRK1-202ENST00000553683 OR2A2Q6IF42 318 aa1.53□□□□□ -2.16
VRK1-202ENST00000553683 FAM45BPQ6NSW5 357 aa1.53□□□□□ -2.16
VRK1-202ENST00000553683 LPCAT3Q6P1A2 487 aa1.53□□□□□ -2.16
VRK1-202ENST00000553683 ARL9Q6T311 187 aa1.53□□□□□ -2.16
VRK1-202ENST00000553683 UQCC3Q6UW78 93 aa1.53□□□□□ -2.16
VRK1-202ENST00000553683 MBOAT1Q6ZNC8 495 aa1.53□□□□□ -2.16
VRK1-202ENST00000553683 TCF24Q7RTU0 167 aa1.53□□□□□ -2.16
VRK1-202ENST00000553683 GRINAQ7Z429 371 aa1.53□□□□□ -2.16
VRK1-202ENST00000553683 OAFQ86UD1 273 aa1.53□□□□□ -2.16
VRK1-202ENST00000553683 RALGAPBQ86X10 1494 aa1.53□□□□□ -2.16
VRK1-202ENST00000553683 CRLF3Q8IUI8 442 aa1.53□□□□□ -2.16
VRK1-202ENST00000553683 TMEM251Q8N6I4 163 aa1.53□□□□□ -2.16
VRK1-202ENST00000553683 OR7G2Q8NG99 324 aa1.53□□□□□ -2.16
VRK1-202ENST00000553683 OR13D1Q8NGV5 346 aa1.53□□□□□ -2.16
VRK1-202ENST00000553683 OR5H6Q8NGV6 325 aa1.53□□□□□ -2.16
VRK1-202ENST00000553683 OR10R2Q8NGX6 335 aa1.53□□□□□ -2.16
VRK1-202ENST00000553683 OR10X1Q8NGY0 326 aa1.53□□□□□ -2.16
VRK1-202ENST00000553683 OR51A7Q8NH64 312 aa1.53□□□□□ -2.16
VRK1-202ENST00000553683 GRPEL2Q8TAA5 225 aa1.53□□□□□ -2.16
VRK1-202ENST00000553683 PIGXQ8TBF5 258 aa1.53□□□□□ -2.16
VRK1-202ENST00000553683 CD200R1Q8TD46 325 aa1.53□□□□□ -2.16
VRK1-202ENST00000553683 C16orf78Q8WTQ4 265 aa1.53□□□□□ -2.16
VRK1-202ENST00000553683 NAT14Q8WUY8 206 aa1.53□□□□□ -2.16
VRK1-202ENST00000553683 RORBQ92753 470 aa1.53□□□□□ -2.16
VRK1-202ENST00000553683 FAM131CQ96AQ9 280 aa1.53□□□□□ -2.16
VRK1-202ENST00000553683 C8orf44Q96CB5 159 aa1.53□□□□□ -2.16
VRK1-202ENST00000553683 ZNF75AQ96N20 296 aa1.53□□□□□ -2.16
VRK1-202ENST00000553683 QKIQ96PU8 341 aaKnown RBP eCLIP1.53□□□□□ -2.16
VRK1-202ENST00000553683 PFDN5Q99471 154 aa1.53□□□□□ -2.16
VRK1-202ENST00000553683 RBBP8Q99708 897 aa1.53□□□□□ -2.16
VRK1-202ENST00000553683 MED18Q9BUE0 208 aa1.53□□□□□ -2.16
VRK1-202ENST00000553683 RNF17Q9BXT8 1623 aaKnown RBP1.53□□□□□ -2.16
VRK1-202ENST00000553683 CHRNA10Q9GZZ6 450 aa1.53□□□□□ -2.16
VRK1-202ENST00000553683 NMNAT1Q9HAN9 279 aaPredicted RBP1.53□□□□□ -2.16
VRK1-202ENST00000553683 TPT1P8Q9HAU6 139 aa1.53□□□□□ -2.16
VRK1-202ENST00000553683 PLEKHA1Q9HB21 404 aa1.53□□□□□ -2.16
VRK1-202ENST00000553683 TMBIM4Q9HC24 238 aa1.53□□□□□ -2.16
VRK1-202ENST00000553683 C6orf50Q9HD87 102 aa1.53□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms