RNA–Protein interactions for RNA: ENST00000553622.5

CHD8-204, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-204ENST00000553622 RPS2P15880 293 aaKnown RBP8.16□□□□□ -1.1
CHD8-204ENST00000553622 HIST1H1DP16402 221 aaKnown RBP8.16□□□□□ -1.1
CHD8-204ENST00000553622 NDUFB7P17568 137 aa8.16□□□□□ -1.1
CHD8-204ENST00000553622 CHATP28329 748 aa8.16□□□□□ -1.1
CHD8-204ENST00000553622 NR4A2P43354 598 aa8.16□□□□□ -1.1
CHD8-204ENST00000553622 IL13RA1P78552 427 aa8.16□□□□□ -1.1
CHD8-204ENST00000553622 PITPNAQ00169 270 aa8.16□□□□□ -1.1
CHD8-204ENST00000553622 RBM39Q14498 530 aaKnown RBP8.16□□□□□ -1.1
CHD8-204ENST00000553622 ZNF846Q147U1 533 aa8.16□□□□□ -1.1
CHD8-204ENST00000553622 GRK1Q15835 563 aa8.16□□□□□ -1.1
CHD8-204ENST00000553622 DEFB113Q30KQ7 82 aa8.16□□□□□ -1.1
CHD8-204ENST00000553622 DUX4L9Q6RFH8 374 aaPredicted RBP8.16□□□□□ -1.1
CHD8-204ENST00000553622 LYPD2Q6UXB3 125 aa8.16□□□□□ -1.1
CHD8-204ENST00000553622 SLC36A1Q7Z2H8 476 aa8.16□□□□□ -1.1
CHD8-204ENST00000553622 CCDC190Q86UF4 302 aa8.16□□□□□ -1.1
CHD8-204ENST00000553622 ZNF561Q8N587 486 aa8.16□□□□□ -1.1
CHD8-204ENST00000553622 ZNRF1Q8ND25 227 aa8.16□□□□□ -1.1
CHD8-204ENST00000553622 PPP1R35Q8TAP8 253 aa8.16□□□□□ -1.1
CHD8-204ENST00000553622 NUDCD2Q8WVJ2 157 aa8.16□□□□□ -1.1
CHD8-204ENST00000553622 GAFA1Q96PS6 74 aa8.16□□□□□ -1.1
CHD8-204ENST00000553622 WDR12Q9GZL7 423 aaKnown RBP8.16□□□□□ -1.1
CHD8-204ENST00000553622 AUNIPQ9H7T9 357 aa8.16□□□□□ -1.1
CHD8-204ENST00000553622 TMEM165Q9HC07 324 aa8.16□□□□□ -1.1
CHD8-204ENST00000553622 AKIP1Q9NQ31 210 aa8.16□□□□□ -1.1
CHD8-204ENST00000553622 ETAA1Q9NY74 926 aa8.16□□□□□ -1.1
CHD8-204ENST00000553622 DUX4Q9UBX2 424 aa8.16□□□□□ -1.1
CHD8-204ENST00000553622 AK3Q9UIJ7 227 aa8.16□□□□□ -1.1
CHD8-204ENST00000553622 ELF5Q9UKW6 265 aaPredicted RBP8.16□□□□□ -1.1
CHD8-204ENST00000553622 TMEM82A0PJX8 343 aa8.15□□□□□ -1.1
CHD8-204ENST00000553622 CEACAM18A8MTB9 384 aa8.15□□□□□ -1.1
CHD8-204ENST00000553622 MFNGO00587 321 aa8.15□□□□□ -1.1
CHD8-204ENST00000553622 NDUFB3O43676 98 aa8.15□□□□□ -1.1
CHD8-204ENST00000553622 PSPNO60542 156 aa8.15□□□□□ -1.1
CHD8-204ENST00000553622 GSTP1P09211 210 aaKnown RBP8.15□□□□□ -1.1
CHD8-204ENST00000553622 PRSS3P35030 304 aa8.15□□□□□ -1.1
CHD8-204ENST00000553622 OR3A1P47881 315 aa8.15□□□□□ -1.1
CHD8-204ENST00000553622 TMEM50BP56557 158 aa8.15□□□□□ -1.1
CHD8-204ENST00000553622 ZNF45Q02386 682 aa8.15□□□□□ -1.1
CHD8-204ENST00000553622 GUCA2AQ02747 115 aa8.15□□□□□ -1.1
CHD8-204ENST00000553622 ARL6IP1Q15041 203 aa8.15□□□□□ -1.1
CHD8-204ENST00000553622 CLEC12BQ2HXU8 276 aa8.15□□□□□ -1.1
CHD8-204ENST00000553622 ZNF260Q3ZCT1 412 aa8.15□□□□□ -1.1
CHD8-204ENST00000553622 PYHIN1Q6K0P9 492 aa8.15□□□□□ -1.1
CHD8-204ENST00000553622 DCDC5Q6ZRR9 648 aa8.15□□□□□ -1.1
CHD8-204ENST00000553622 GDPD3Q7L5L3 318 aa8.15□□□□□ -1.1
CHD8-204ENST00000553622 NLRC3Q7RTR2 1065 aa8.15□□□□□ -1.1
CHD8-204ENST00000553622 TRAPPC6BQ86SZ2 158 aa8.15□□□□□ -1.1
CHD8-204ENST00000553622 OR8H2Q8N162 312 aa8.15□□□□□ -1.1
CHD8-204ENST00000553622 MFSD4AQ8N468 514 aa8.15□□□□□ -1.1
CHD8-204ENST00000553622 SPICQ8N5J4 248 aa8.15□□□□□ -1.1
CHD8-204ENST00000553622 OR4S1Q8NGB4 309 aa8.15□□□□□ -1.1
CHD8-204ENST00000553622 ST8SIA4Q92187 359 aa8.15□□□□□ -1.1
CHD8-204ENST00000553622 H1FXQ92522 213 aaKnown RBP8.15□□□□□ -1.1
CHD8-204ENST00000553622 POM121Q96HA1 1249 aa8.15□□□□□ -1.1
CHD8-204ENST00000553622 MED30Q96HR3 178 aa8.15□□□□□ -1.1
CHD8-204ENST00000553622 ABHD1Q96SE0 405 aa8.15□□□□□ -1.1
CHD8-204ENST00000553622 CMSS1Q9BQ75 279 aaKnown RBP8.15□□□□□ -1.1
CHD8-204ENST00000553622 NUDT16L1Q9BRJ7 211 aaKnown RBP8.15□□□□□ -1.1
CHD8-204ENST00000553622 HDHD3Q9BSH5 251 aaPredicted RBP8.15□□□□□ -1.1
CHD8-204ENST00000553622 BPESC1Q9GZL8 116 aa8.15□□□□□ -1.1
CHD8-204ENST00000553622 IFT22Q9H7X7 185 aa8.15□□□□□ -1.1
CHD8-204ENST00000553622 IFT46Q9NQC8 304 aa8.15□□□□□ -1.1
CHD8-204ENST00000553622 SLC25A10Q9UBX3 287 aaPredicted RBP8.15□□□□□ -1.1
CHD8-204ENST00000553622 ZNF222Q9UK12 451 aa8.15□□□□□ -1.1
CHD8-204ENST00000553622 V9GYH0 126 aa8.15□□□□□ -1.1
CHD8-204ENST00000553622 MALRD1Q5VYJ5 2156 aa8.15□□□□□ -1.11
CHD8-204ENST00000553622 FBN2P35556 2912 aa8.15□□□□□ -1.11
CHD8-204ENST00000553622 APCP25054 2843 aa8.15□□□□□ -1.11
CHD8-204ENST00000553622 CR1P17927 2039 aa8.14□□□□□ -1.11
CHD8-204ENST00000553622 MEIOCA2RUB1 952 aa8.14□□□□□ -1.11
CHD8-204ENST00000553622 FOXI3A8MTJ6 420 aaPredicted RBP8.14□□□□□ -1.11
CHD8-204ENST00000553622 SERPINE3A8MV23 424 aa8.14□□□□□ -1.11
CHD8-204ENST00000553622 J3QRK9 145 aa8.14□□□□□ -1.11
CHD8-204ENST00000553622 SIGLEC5O15389 551 aa8.14□□□□□ -1.11
CHD8-204ENST00000553622 NDUFA2O43678 99 aa8.14□□□□□ -1.11
CHD8-204ENST00000553622 HLA-DQB1P01920 261 aa8.14□□□□□ -1.11
CHD8-204ENST00000553622 PAX1P15863 534 aa8.14□□□□□ -1.11
CHD8-204ENST00000553622 AMY2BP19961 511 aa8.14□□□□□ -1.11
CHD8-204ENST00000553622 ETV6P41212 452 aa8.14□□□□□ -1.11
CHD8-204ENST00000553622 INPP1P49441 399 aa8.14□□□□□ -1.11
CHD8-204ENST00000553622 EDDM3BP56851 147 aa8.14□□□□□ -1.11
CHD8-204ENST00000553622 DSCR9P59020 149 aa8.14□□□□□ -1.11
CHD8-204ENST00000553622 DGCR2P98153 550 aa8.14□□□□□ -1.11
CHD8-204ENST00000553622 AESQ08117 197 aa8.14□□□□□ -1.11
CHD8-204ENST00000553622 ZNF79Q15937 498 aa8.14□□□□□ -1.11
CHD8-204ENST00000553622 PNLIPRP3Q17RR3 467 aa8.14□□□□□ -1.11
CHD8-204ENST00000553622 TMEM155Q4W5P6 130 aa8.14□□□□□ -1.11
CHD8-204ENST00000553622 LRRC10Q5BKY1 277 aa8.14□□□□□ -1.11
CHD8-204ENST00000553622 KRBOX4Q5JUW0 171 aa8.14□□□□□ -1.11
CHD8-204ENST00000553622 Q5PR19 223 aa8.14□□□□□ -1.11
CHD8-204ENST00000553622 HACD4Q5VWC8 232 aa8.14□□□□□ -1.11
CHD8-204ENST00000553622 ZNF788Q6ZQV5 615 aa8.14□□□□□ -1.11
CHD8-204ENST00000553622 C17orf107Q6ZR85 190 aa8.14□□□□□ -1.11
CHD8-204ENST00000553622 LINC00299Q6ZSB3 139 aa8.14□□□□□ -1.11
CHD8-204ENST00000553622 FGFRL1Q8N441 504 aa8.14□□□□□ -1.11
CHD8-204ENST00000553622 OR8B3Q8NGG8 313 aa8.14□□□□□ -1.11
CHD8-204ENST00000553622 C10orf105Q8TEF2 133 aa8.14□□□□□ -1.11
CHD8-204ENST00000553622 C15orf40Q8WUR7 153 aa8.14□□□□□ -1.11
CHD8-204ENST00000553622 CCDC107Q8WV48 283 aa8.14□□□□□ -1.11
CHD8-204ENST00000553622 FCAMRQ8WWV6 532 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms