RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 RBM11P57052 281 aaKnown RBP18.71■□□□□ 0.59
TDP1-206ENST00000553569 ATXN7L3Q14CW9 347 aaPredicted RBP18.71■□□□□ 0.59
TDP1-206ENST00000553569 GLT8D1Q68CQ7 371 aa18.71■□□□□ 0.59
TDP1-206ENST00000553569 C9orf139Q6ZV77 190 aa18.71■□□□□ 0.59
TDP1-206ENST00000553569 LYPD6Q86Y78 171 aa18.71■□□□□ 0.59
TDP1-206ENST00000553569 ZNF48Q96MX3 618 aaPredicted RBP18.71■□□□□ 0.59
TDP1-206ENST00000553569 UQCC2Q9BRT2 126 aa18.71■□□□□ 0.59
TDP1-206ENST00000553569 NDUFB11Q9NX14 153 aa18.71■□□□□ 0.59
TDP1-206ENST00000553569 ZNF581Q9P0T4 197 aa18.71■□□□□ 0.59
TDP1-206ENST00000553569 A0A1W2PRD5 423 aa18.7■□□□□ 0.58
TDP1-206ENST00000553569 A0A1W2PRF3 423 aa18.7■□□□□ 0.58
TDP1-206ENST00000553569 A0A1W2PRM7 423 aa18.7■□□□□ 0.58
TDP1-206ENST00000553569 RNASEK-C17orf49H0YIS7 233 aa18.7■□□□□ 0.58
TDP1-206ENST00000553569 ARL6IP5O75915 188 aa18.7■□□□□ 0.58
TDP1-206ENST00000553569 CALRP27797 417 aaKnown RBP18.7■□□□□ 0.58
TDP1-206ENST00000553569 P2RX3P56373 397 aa18.7■□□□□ 0.58
TDP1-206ENST00000553569 HILS1P60008 231 aa18.7■□□□□ 0.58
TDP1-206ENST00000553569 GPR176Q14439 515 aa18.7■□□□□ 0.58
TDP1-206ENST00000553569 PAN3Q58A45 887 aaKnown RBP18.7■□□□□ 0.58
TDP1-206ENST00000553569 RBMS3Q6XE24 437 aaKnown RBP18.7■□□□□ 0.58
TDP1-206ENST00000553569 C1orf122Q6ZSJ8 110 aa18.7■□□□□ 0.58
TDP1-206ENST00000553569 TCF23Q7RTU1 214 aa18.7■□□□□ 0.58
TDP1-206ENST00000553569 PCDHB16Q9NRJ7 776 aa18.7■□□□□ 0.58
TDP1-206ENST00000553569 A0A0A6YYJ9 748 aa18.69■□□□□ 0.58
TDP1-206ENST00000553569 hADV38S2A0JD32 116 aa18.69■□□□□ 0.58
TDP1-206ENST00000553569 CCRL2O00421 344 aa18.69■□□□□ 0.58
TDP1-206ENST00000553569 OR7C1O76099 320 aaPredicted RBP18.69■□□□□ 0.58
TDP1-206ENST00000553569 GTF2F2P13984 249 aa18.69■□□□□ 0.58
TDP1-206ENST00000553569 PRTN3P24158 256 aa18.69■□□□□ 0.58
TDP1-206ENST00000553569 BPIFB3P59826 476 aa18.69■□□□□ 0.58
TDP1-206ENST00000553569 ERVFRD-1P60508 538 aa18.69■□□□□ 0.58
TDP1-206ENST00000553569 MEF2CQ06413 473 aaPredicted RBP18.69■□□□□ 0.58
TDP1-206ENST00000553569 AESQ08117 197 aa18.69■□□□□ 0.58
TDP1-206ENST00000553569 NCR3LG1Q68D85 454 aa18.69■□□□□ 0.58
TDP1-206ENST00000553569 USP43Q70EL4 1123 aa18.69■□□□□ 0.58
TDP1-206ENST00000553569 TRAPPC6BQ86SZ2 158 aa18.69■□□□□ 0.58
TDP1-206ENST00000553569 TNFRSF14Q92956 283 aa18.69■□□□□ 0.58
TDP1-206ENST00000553569 BANF2Q9H503 90 aa18.69■□□□□ 0.58
TDP1-206ENST00000553569 TRAV24A0A0B4J272 114 aa18.68■□□□□ 0.58
TDP1-206ENST00000553569 RNF212BA8MTL3 300 aa18.68■□□□□ 0.58
TDP1-206ENST00000553569 GEMIN2O14893 280 aaKnown RBP18.68■□□□□ 0.58
TDP1-206ENST00000553569 CRTAPO75718 401 aaPredicted RBP18.68■□□□□ 0.58
TDP1-206ENST00000553569 ZNF728P0DKX0 622 aa18.68■□□□□ 0.58
TDP1-206ENST00000553569 GLIPR1P48060 266 aa18.68■□□□□ 0.58
TDP1-206ENST00000553569 GUCA2AQ02747 115 aa18.68■□□□□ 0.58
TDP1-206ENST00000553569 NEDD8Q15843 81 aa18.68■□□□□ 0.58
TDP1-206ENST00000553569 DEFB112Q30KQ8 113 aa18.68■□□□□ 0.58
TDP1-206ENST00000553569 NHLRC3Q5JS37 347 aa18.68■□□□□ 0.58
TDP1-206ENST00000553569 METAP1DQ6UB28 335 aaPredicted RBP18.68■□□□□ 0.58
TDP1-206ENST00000553569 ZNF782Q6ZMW2 699 aaPredicted RBP18.68■□□□□ 0.58
TDP1-206ENST00000553569 PNKDQ8N490 385 aa18.68■□□□□ 0.58
TDP1-206ENST00000553569 FOXRED1Q96CU9 486 aaPredicted RBP18.68■□□□□ 0.58
TDP1-206ENST00000553569 C1orf147Q96MC9 270 aaPredicted RBP18.68■□□□□ 0.58
TDP1-206ENST00000553569 ZNF714Q96N38 554 aa18.68■□□□□ 0.58
TDP1-206ENST00000553569 JMJD8Q96S16 334 aa18.68■□□□□ 0.58
TDP1-206ENST00000553569 LINC00312Q9Y6C7 94 aa18.68■□□□□ 0.58
TDP1-206ENST00000553569 hCG_1809904A0A1W2PP81 198 aa18.67■□□□□ 0.58
TDP1-206ENST00000553569 A0A1W2PPE2 198 aa18.67■□□□□ 0.58
TDP1-206ENST00000553569 A0A1W2PR64 198 aa18.67■□□□□ 0.58
TDP1-206ENST00000553569 A0A1W2PRV1 198 aa18.67■□□□□ 0.58
TDP1-206ENST00000553569 FUOMA2VDF0 154 aa18.67■□□□□ 0.58
TDP1-206ENST00000553569 ERP29P30040 261 aaKnown RBP18.67■□□□□ 0.58
TDP1-206ENST00000553569 DLX6P56179 175 aa18.67■□□□□ 0.58
TDP1-206ENST00000553569 TAF9Q16594 264 aa18.67■□□□□ 0.58
TDP1-206ENST00000553569 TUSC1Q2TAM9 212 aa18.67■□□□□ 0.58
TDP1-206ENST00000553569 KRTAP24-1Q3LI83 254 aa18.67■□□□□ 0.58
TDP1-206ENST00000553569 KRBOX4Q5JUW0 171 aa18.67■□□□□ 0.58
TDP1-206ENST00000553569 LINC00596Q86U02 117 aa18.67■□□□□ 0.58
TDP1-206ENST00000553569 FAM46BQ96A09 425 aa18.67■□□□□ 0.58
TDP1-206ENST00000553569 COQ2Q96H96 371 aa18.67■□□□□ 0.58
TDP1-206ENST00000553569 DUX5Q96PT3 197 aa18.67■□□□□ 0.58
TDP1-206ENST00000553569 MDFIQ99750 246 aa18.67■□□□□ 0.58
TDP1-206ENST00000553569 UNKLQ9H9P5 680 aaKnown RBP18.67■□□□□ 0.58
TDP1-206ENST00000553569 ESM1Q9NQ30 184 aa18.67■□□□□ 0.58
TDP1-206ENST00000553569 AK6Q9Y3D8 172 aaKnown RBP18.67■□□□□ 0.58
TDP1-206ENST00000553569 CSN2P05814 226 aa18.66■□□□□ 0.58
TDP1-206ENST00000553569 MGMTP16455 207 aa18.66■□□□□ 0.58
TDP1-206ENST00000553569 COX7A1P24310 79 aa18.66■□□□□ 0.58
TDP1-206ENST00000553569 MPV17LQ2QL34 196 aa18.66■□□□□ 0.58
TDP1-206ENST00000553569 ATAD3CQ5T2N8 411 aa18.66■□□□□ 0.58
TDP1-206ENST00000553569 HCP5Q6MZN7 132 aa18.66■□□□□ 0.58
TDP1-206ENST00000553569 PIP4P2Q8N4L2 257 aa18.66■□□□□ 0.58
TDP1-206ENST00000553569 C11orf42Q8N5U0 333 aa18.66■□□□□ 0.58
TDP1-206ENST00000553569 SUMF2Q8NBJ7 301 aa18.66■□□□□ 0.58
TDP1-206ENST00000553569 TMEM104Q8NE00 496 aa18.66■□□□□ 0.58
TDP1-206ENST00000553569 TMEM158Q8WZ71 300 aa18.66■□□□□ 0.58
TDP1-206ENST00000553569 ZDHHC16Q969W1 377 aa18.66■□□□□ 0.58
TDP1-206ENST00000553569 GFI1Q99684 422 aa18.66■□□□□ 0.58
TDP1-206ENST00000553569 DPCDQ9BVM2 203 aaPredicted RBP18.66■□□□□ 0.58
TDP1-206ENST00000553569 SELENOIQ9C0D9 397 aa18.66■□□□□ 0.58
TDP1-206ENST00000553569 A0A0U1RQK1 487 aa18.65■□□□□ 0.58
TDP1-206ENST00000553569 ODAMA1E959 279 aa18.65■□□□□ 0.58
TDP1-206ENST00000553569 C17orf98A8MV24 154 aa18.65■□□□□ 0.58
TDP1-206ENST00000553569 NPFFO15130 113 aa18.65■□□□□ 0.58
TDP1-206ENST00000553569 TNFAIP8O95379 198 aa18.65■□□□□ 0.58
TDP1-206ENST00000553569 HTR2CP28335 458 aa18.65■□□□□ 0.58
TDP1-206ENST00000553569 BAMBIQ13145 260 aa18.65■□□□□ 0.58
TDP1-206ENST00000553569 C1orf100Q5SVJ3 147 aa18.65■□□□□ 0.58
TDP1-206ENST00000553569 ZDHHC22Q8N966 263 aa18.65■□□□□ 0.58
TDP1-206ENST00000553569 KCNK15Q9H427 330 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms