RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 CLIC3O95833 236 aa9.52□□□□□ -0.89
SRP54-203ENST00000553544 HAND1O96004 215 aa9.52□□□□□ -0.89
SRP54-203ENST00000553544 RBP4P02753 201 aa9.52□□□□□ -0.89
SRP54-203ENST00000553544 VHLP40337 213 aa9.52□□□□□ -0.89
SRP54-203ENST00000553544 POU3F4P49335 361 aa9.52□□□□□ -0.89
SRP54-203ENST00000553544 AQP4P55087 323 aa9.52□□□□□ -0.89
SRP54-203ENST00000553544 LGALS4P56470 323 aa9.52□□□□□ -0.89
SRP54-203ENST00000553544 HABP2Q14520 560 aaPredicted RBP9.52□□□□□ -0.89
SRP54-203ENST00000553544 SPIN3Q5JUX0 258 aa9.52□□□□□ -0.89
SRP54-203ENST00000553544 TCF23Q7RTU1 214 aa9.52□□□□□ -0.89
SRP54-203ENST00000553544 Q8N2B8 174 aa9.52□□□□□ -0.89
SRP54-203ENST00000553544 STX19Q8N4C7 294 aa9.52□□□□□ -0.89
SRP54-203ENST00000553544 OR13C9Q8NGT0 318 aa9.52□□□□□ -0.89
SRP54-203ENST00000553544 OR52N1Q8NH53 320 aa9.52□□□□□ -0.89
SRP54-203ENST00000553544 PIFOQ8TCI5 191 aa9.52□□□□□ -0.89
SRP54-203ENST00000553544 RPS4Y2Q8TD47 263 aa9.52□□□□□ -0.89
SRP54-203ENST00000553544 THRSPQ92748 146 aa9.52□□□□□ -0.89
SRP54-203ENST00000553544 EMG1Q92979 244 aaKnown RBP9.52□□□□□ -0.89
SRP54-203ENST00000553544 PDCD1LG2Q9BQ51 273 aa9.52□□□□□ -0.89
SRP54-203ENST00000553544 CDCA4Q9BXL8 241 aa9.52□□□□□ -0.89
SRP54-203ENST00000553544 PRSS22Q9GZN4 317 aa9.52□□□□□ -0.89
SRP54-203ENST00000553544 ZCCHC4Q9H5U6 513 aa9.52□□□□□ -0.89
SRP54-203ENST00000553544 ZNF702PQ9H963 129 aa9.52□□□□□ -0.89
SRP54-203ENST00000553544 HMG20AQ9NP66 347 aa9.52□□□□□ -0.89
SRP54-203ENST00000553544 PLCXD1Q9NUJ7 323 aa9.52□□□□□ -0.89
SRP54-203ENST00000553544 NKX1-2Q9UD57 310 aaPredicted RBP9.52□□□□□ -0.89
SRP54-203ENST00000553544 WI2-2373I1.2A0A1W2PRP0 233 aa9.51□□□□□ -0.89
SRP54-203ENST00000553544 FAM90A8PA6NJQ4 464 aa9.51□□□□□ -0.89
SRP54-203ENST00000553544 CHST1O43916 411 aa9.51□□□□□ -0.89
SRP54-203ENST00000553544 KDM4BO94953 1096 aa9.51□□□□□ -0.89
SRP54-203ENST00000553544 CYB5AP00167 134 aa9.51□□□□□ -0.89
SRP54-203ENST00000553544 CD2P06729 351 aa9.51□□□□□ -0.89
SRP54-203ENST00000553544 ZNF728P0DKX0 622 aa9.51□□□□□ -0.89
SRP54-203ENST00000553544 LMO1P25800 156 aa9.51□□□□□ -0.89
SRP54-203ENST00000553544 DUSP1P28562 367 aa9.51□□□□□ -0.89
SRP54-203ENST00000553544 BMXP51813 675 aa9.51□□□□□ -0.89
SRP54-203ENST00000553544 ZP1P60852 638 aa9.51□□□□□ -0.89
SRP54-203ENST00000553544 MEF2CQ06413 473 aaPredicted RBP9.51□□□□□ -0.89
SRP54-203ENST00000553544 ZNF529Q6P280 563 aa9.51□□□□□ -0.89
SRP54-203ENST00000553544 RPL22L1Q6P5R6 122 aaKnown RBP9.51□□□□□ -0.89
SRP54-203ENST00000553544 IZUMO2Q6UXV1 221 aa9.51□□□□□ -0.89
SRP54-203ENST00000553544 GDPD3Q7L5L3 318 aa9.51□□□□□ -0.89
SRP54-203ENST00000553544 SERPINA12Q8IW75 414 aa9.51□□□□□ -0.89
SRP54-203ENST00000553544 SAXO1Q8IYX7 474 aa9.51□□□□□ -0.89
SRP54-203ENST00000553544 OR5AK2Q8NH90 309 aa9.51□□□□□ -0.89
SRP54-203ENST00000553544 WIPF2Q8TF74 440 aaPredicted RBP9.51□□□□□ -0.89
SRP54-203ENST00000553544 MYDGFQ969H8 173 aa9.51□□□□□ -0.89
SRP54-203ENST00000553544 RFT1Q96AA3 541 aa9.51□□□□□ -0.89
SRP54-203ENST00000553544 SPACA5Q96QH8 159 aa9.51□□□□□ -0.89
SRP54-203ENST00000553544 ANKRD60Q9BZ19 345 aa9.51□□□□□ -0.89
SRP54-203ENST00000553544 RHOFQ9HBH0 211 aa9.51□□□□□ -0.89
SRP54-203ENST00000553544 RAB26Q9ULW5 256 aa9.51□□□□□ -0.89
SRP54-203ENST00000553544 ERGIC3Q9Y282 383 aa9.51□□□□□ -0.89
SRP54-203ENST00000553544 TPRKBQ9Y3C4 175 aa9.51□□□□□ -0.89
SRP54-203ENST00000553544 SULT1B1O43704 296 aa9.5□□□□□ -0.89
SRP54-203ENST00000553544 DUS4LO95620 317 aaKnown RBP9.5□□□□□ -0.89
SRP54-203ENST00000553544 CALCBP10092 127 aa9.5□□□□□ -0.89
SRP54-203ENST00000553544 PF4V1P10720 104 aa9.5□□□□□ -0.89
SRP54-203ENST00000553544 PRKACAP17612 351 aa9.5□□□□□ -0.89
SRP54-203ENST00000553544 PAX6P26367 422 aa9.5□□□□□ -0.89
SRP54-203ENST00000553544 ERP29P30040 261 aaKnown RBP9.5□□□□□ -0.89
SRP54-203ENST00000553544 ETV1P50549 477 aa9.5□□□□□ -0.89
SRP54-203ENST00000553544 GTF2A1P52655 376 aaPredicted RBP9.5□□□□□ -0.89
SRP54-203ENST00000553544 EDDM3BP56851 147 aa9.5□□□□□ -0.89
SRP54-203ENST00000553544 SLC35A2P78381 396 aa9.5□□□□□ -0.89
SRP54-203ENST00000553544 ST3GAL4Q11206 333 aa9.5□□□□□ -0.89
SRP54-203ENST00000553544 KISS1Q15726 138 aa9.5□□□□□ -0.89
SRP54-203ENST00000553544 ARSJQ5FYB0 599 aaPredicted RBP9.5□□□□□ -0.89
SRP54-203ENST00000553544 XAF1Q6GPH4 301 aa9.5□□□□□ -0.89
SRP54-203ENST00000553544 BPIFB6Q8NFQ5 453 aa9.5□□□□□ -0.89
SRP54-203ENST00000553544 OR5D14Q8NGL3 314 aa9.5□□□□□ -0.89
SRP54-203ENST00000553544 FBLIM1Q8WUP2 373 aa9.5□□□□□ -0.89
SRP54-203ENST00000553544 TSEN15Q8WW01 171 aaKnown RBP9.5□□□□□ -0.89
SRP54-203ENST00000553544 RGP1Q92546 391 aaPredicted RBP9.5□□□□□ -0.89
SRP54-203ENST00000553544 RCC1LQ96I51 464 aaKnown RBP9.5□□□□□ -0.89
SRP54-203ENST00000553544 OR5M11Q96RB7 305 aa9.5□□□□□ -0.89
SRP54-203ENST00000553544 B9D2Q9BPU9 175 aa9.5□□□□□ -0.89
SRP54-203ENST00000553544 WNT10AQ9GZT5 417 aa9.5□□□□□ -0.89
SRP54-203ENST00000553544 CHST6Q9GZX3 395 aa9.5□□□□□ -0.89
SRP54-203ENST00000553544 DHDHQ9UQ10 334 aa9.5□□□□□ -0.89
SRP54-203ENST00000553544 LINC00312Q9Y6C7 94 aa9.5□□□□□ -0.89
SRP54-203ENST00000553544 A0A1W2PRX2 142 aa9.49□□□□□ -0.89
SRP54-203ENST00000553544 hADV38S2A0JD32 116 aa9.49□□□□□ -0.89
SRP54-203ENST00000553544 MEX3AA1L020 520 aaKnown RBP9.49□□□□□ -0.89
SRP54-203ENST00000553544 MEGF11A6BM72 1044 aa9.49□□□□□ -0.89
SRP54-203ENST00000553544 VGLL3A8MV65 326 aa9.49□□□□□ -0.89
SRP54-203ENST00000553544 ODF3BA8MYP8 253 aa9.49□□□□□ -0.89
SRP54-203ENST00000553544 MGST3O14880 152 aa9.49□□□□□ -0.89
SRP54-203ENST00000553544 OGG1O15527 345 aa9.49□□□□□ -0.89
SRP54-203ENST00000553544 OR2H2O95918 312 aa9.49□□□□□ -0.89
SRP54-203ENST00000553544 GNAO1P09471 354 aa9.49□□□□□ -0.89
SRP54-203ENST00000553544 IGHV1-8P0DP01 117 aa9.49□□□□□ -0.89
SRP54-203ENST00000553544 MYF6P23409 242 aa9.49□□□□□ -0.89
SRP54-203ENST00000553544 GABRR1P24046 479 aa9.49□□□□□ -0.89
SRP54-203ENST00000553544 COX7A1P24310 79 aa9.49□□□□□ -0.89
SRP54-203ENST00000553544 OR3A1P47881 315 aa9.49□□□□□ -0.89
SRP54-203ENST00000553544 RAB13P51153 203 aa9.49□□□□□ -0.89
SRP54-203ENST00000553544 KRTAP10-11P60412 298 aa9.49□□□□□ -0.89
SRP54-203ENST00000553544 CD83Q01151 205 aa9.49□□□□□ -0.89
SRP54-203ENST00000553544 CDK5R1Q15078 307 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms