RNA–Protein interactions for RNA: ENST00000553426.1

LINC00643-202, long intergenic non-protein coding RNA 643, humanhuman

TSL 3 BASIC

Gene LINC00643, Length 526 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-202ENST00000553426 OR4P4Q8NGL7 312 aa10.25□□□□□ -0.77
LINC00643-202ENST00000553426 HAVCR2Q8TDQ0 301 aa10.25□□□□□ -0.77
LINC00643-202ENST00000553426 TSEN15Q8WW01 171 aaKnown RBP10.25□□□□□ -0.77
LINC00643-202ENST00000553426 CORO2AQ92828 525 aa10.25□□□□□ -0.77
LINC00643-202ENST00000553426 RNF166Q96A37 237 aaPredicted RBP10.25□□□□□ -0.77
LINC00643-202ENST00000553426 LGALS12Q96DT0 336 aa10.25□□□□□ -0.77
LINC00643-202ENST00000553426 SPACA5Q96QH8 159 aa10.25□□□□□ -0.77
LINC00643-202ENST00000553426 C9orf16Q9BUW7 83 aa10.25□□□□□ -0.77
LINC00643-202ENST00000553426 INPP5EQ9NRR6 644 aa10.25□□□□□ -0.77
LINC00643-202ENST00000553426 OR6C3Q9NZP0 311 aa10.25□□□□□ -0.77
LINC00643-202ENST00000553426 DHDHQ9UQ10 334 aa10.25□□□□□ -0.77
LINC00643-202ENST00000553426 IGKV1-12A0A0C4DH73 117 aa10.24□□□□□ -0.77
LINC00643-202ENST00000553426 ODAMA1E959 279 aa10.24□□□□□ -0.77
LINC00643-202ENST00000553426 TMEM212A6NML5 194 aa10.24□□□□□ -0.77
LINC00643-202ENST00000553426 FAM90A22PA8MWA6 464 aa10.24□□□□□ -0.77
LINC00643-202ENST00000553426 SULT1B1O43704 296 aa10.24□□□□□ -0.77
LINC00643-202ENST00000553426 ALX3O95076 343 aa10.24□□□□□ -0.77
LINC00643-202ENST00000553426 IGKV1D-12P01611 117 aa10.24□□□□□ -0.77
LINC00643-202ENST00000553426 GLIPR1P48060 266 aa10.24□□□□□ -0.77
LINC00643-202ENST00000553426 MTNR1BP49286 362 aa10.24□□□□□ -0.77
LINC00643-202ENST00000553426 GBX2P52951 348 aaPredicted RBP10.24□□□□□ -0.77
LINC00643-202ENST00000553426 KISS1Q15726 138 aa10.24□□□□□ -0.77
LINC00643-202ENST00000553426 BEAN1Q3B7T3 259 aa10.24□□□□□ -0.77
LINC00643-202ENST00000553426 SAMD5Q5TGI4 173 aa10.24□□□□□ -0.77
LINC00643-202ENST00000553426 CCDC144NLQ6NUI1 221 aa10.24□□□□□ -0.77
LINC00643-202ENST00000553426 CCDC121Q6ZUS5 278 aa10.24□□□□□ -0.77
LINC00643-202ENST00000553426 ZNF565Q8N9K5 539 aa10.24□□□□□ -0.77
LINC00643-202ENST00000553426 OR10AC1Q8NH08 325 aa10.24□□□□□ -0.77
LINC00643-202ENST00000553426 OR5AK2Q8NH90 309 aa10.24□□□□□ -0.77
LINC00643-202ENST00000553426 GPER1Q99527 375 aa10.24□□□□□ -0.77
LINC00643-202ENST00000553426 CITED2Q99967 270 aaPredicted RBP10.24□□□□□ -0.77
LINC00643-202ENST00000553426 WNT10AQ9GZT5 417 aa10.24□□□□□ -0.77
LINC00643-202ENST00000553426 LIN7BQ9HAP6 207 aa10.24□□□□□ -0.77
LINC00643-202ENST00000553426 ING3Q9NXR8 418 aa10.24□□□□□ -0.77
LINC00643-202ENST00000553426 DSCAML1Q8TD84 2053 aa10.24□□□□□ -0.77
LINC00643-202ENST00000553426 ZNF729A6NN14 1252 aaPredicted RBP10.23□□□□□ -0.77
LINC00643-202ENST00000553426 MMP23AO75900 390 aa10.23□□□□□ -0.77
LINC00643-202ENST00000553426 JUNBP17275 347 aaPredicted RBP10.23□□□□□ -0.77
LINC00643-202ENST00000553426 RAB3AP20336 220 aa10.23□□□□□ -0.77
LINC00643-202ENST00000553426 MNDAP41218 407 aa10.23□□□□□ -0.77
LINC00643-202ENST00000553426 RAB40BQ12829 278 aa10.23□□□□□ -0.77
LINC00643-202ENST00000553426 RBM39Q14498 530 aaKnown RBP10.23□□□□□ -0.77
LINC00643-202ENST00000553426 KLHL22Q53GT1 634 aa10.23□□□□□ -0.77
LINC00643-202ENST00000553426 KPRPQ5T749 579 aaPredicted RBP10.23□□□□□ -0.77
LINC00643-202ENST00000553426 CENPVQ7Z7K6 275 aaPredicted RBP10.23□□□□□ -0.77
LINC00643-202ENST00000553426 PARP16Q8N5Y8 322 aa10.23□□□□□ -0.77
LINC00643-202ENST00000553426 OR5AU1Q8NGC0 362 aa10.23□□□□□ -0.77
LINC00643-202ENST00000553426 SLC25A33Q9BSK2 321 aa10.23□□□□□ -0.77
LINC00643-202ENST00000553426 BARHL1Q9BZE3 327 aa10.23□□□□□ -0.77
LINC00643-202ENST00000553426 MMP28Q9H239 520 aa10.23□□□□□ -0.77
LINC00643-202ENST00000553426 MYRFQ9Y2G1 1151 aa10.23□□□□□ -0.77
LINC00643-202ENST00000553426 RPL36Q9Y3U8 105 aaKnown RBP10.23□□□□□ -0.77
LINC00643-202ENST00000553426 FAM172BPA6NC97 362 aa10.22□□□□□ -0.77
LINC00643-202ENST00000553426 OOSP1A8MZH6 123 aa10.22□□□□□ -0.77
LINC00643-202ENST00000553426 H3BNX3 289 aa10.22□□□□□ -0.77
LINC00643-202ENST00000553426 M0QZK8 103 aa10.22□□□□□ -0.77
LINC00643-202ENST00000553426 SLC33A1O00400 549 aaPredicted RBP10.22□□□□□ -0.77
LINC00643-202ENST00000553426 ZFPL1O95159 310 aa10.22□□□□□ -0.77
LINC00643-202ENST00000553426 IGLV1-47P01700 117 aa10.22□□□□□ -0.77
LINC00643-202ENST00000553426 CD2P06729 351 aa10.22□□□□□ -0.77
LINC00643-202ENST00000553426 PF4V1P10720 104 aa10.22□□□□□ -0.77
LINC00643-202ENST00000553426 NFYBP25208 207 aa10.22□□□□□ -0.77
LINC00643-202ENST00000553426 CD34P28906 385 aa10.22□□□□□ -0.77
LINC00643-202ENST00000553426 C21orf33P30042 268 aaPredicted RBP10.22□□□□□ -0.77
LINC00643-202ENST00000553426 ATXN7L3Q14CW9 347 aaPredicted RBP10.22□□□□□ -0.77
LINC00643-202ENST00000553426 HLA-DRB5Q30154 266 aa10.22□□□□□ -0.77
LINC00643-202ENST00000553426 PAN3Q58A45 887 aaKnown RBP10.22□□□□□ -0.77
LINC00643-202ENST00000553426 ZNF691Q5VV52 312 aa10.22□□□□□ -0.77
LINC00643-202ENST00000553426 Q6P435 159 aa10.22□□□□□ -0.77
LINC00643-202ENST00000553426 SATL1Q86VE3 508 aa10.22□□□□□ -0.77
LINC00643-202ENST00000553426 RHOXF1Q8NHV9 184 aa10.22□□□□□ -0.77
LINC00643-202ENST00000553426 SGCDQ92629 289 aa10.22□□□□□ -0.77
LINC00643-202ENST00000553426 NR1H4Q96RI1 486 aaPredicted RBP10.22□□□□□ -0.77
LINC00643-202ENST00000553426 PDCD1LG2Q9BQ51 273 aa10.22□□□□□ -0.77
LINC00643-202ENST00000553426 ISG20L2Q9H9L3 353 aaKnown RBP10.22□□□□□ -0.77
LINC00643-202ENST00000553426 AMBNQ9NP70 447 aa10.22□□□□□ -0.77
LINC00643-202ENST00000553426 PCDHB16Q9NRJ7 776 aa10.22□□□□□ -0.77
LINC00643-202ENST00000553426 ERVK13-1Q9NX77 482 aa10.22□□□□□ -0.77
LINC00643-202ENST00000553426 AASSQ9UDR5 926 aa10.22□□□□□ -0.77
LINC00643-202ENST00000553426 AMMECR1Q9Y4X0 333 aaPredicted RBP10.22□□□□□ -0.77
LINC00643-202ENST00000553426 KBTBD11-OT1A0A1B0GTJ5 212 aa10.21□□□□□ -0.77
LINC00643-202ENST00000553426 LOC100130705A0A1B0GUX0 176 aa10.21□□□□□ -0.77
LINC00643-202ENST00000553426 H0YJX3 145 aa10.21□□□□□ -0.77
LINC00643-202ENST00000553426 BUB1B-PAK6H3BSN5 160 aa10.21□□□□□ -0.77
LINC00643-202ENST00000553426 OR2F2O95006 317 aa10.21□□□□□ -0.77
LINC00643-202ENST00000553426 FAM106CPP0CH98 169 aa10.21□□□□□ -0.77
LINC00643-202ENST00000553426 GABRB1P18505 474 aa10.21□□□□□ -0.77
LINC00643-202ENST00000553426 CD33P20138 364 aa10.21□□□□□ -0.77
LINC00643-202ENST00000553426 CD24P25063 80 aa10.21□□□□□ -0.77
LINC00643-202ENST00000553426 GLP1RP43220 463 aa10.21□□□□□ -0.77
LINC00643-202ENST00000553426 OR3A4PP47883 348 aa10.21□□□□□ -0.77
LINC00643-202ENST00000553426 ZP1P60852 638 aa10.21□□□□□ -0.77
LINC00643-202ENST00000553426 RSU1Q15404 277 aa10.21□□□□□ -0.77
LINC00643-202ENST00000553426 TMEM95Q3KNT9 176 aa10.21□□□□□ -0.77
LINC00643-202ENST00000553426 ABCA11PQ4W5N1 156 aa10.21□□□□□ -0.77
LINC00643-202ENST00000553426 FBLN7Q53RD9 439 aa10.21□□□□□ -0.77
LINC00643-202ENST00000553426 ELP2Q6IA86 826 aa10.21□□□□□ -0.77
LINC00643-202ENST00000553426 Q6ZS46 218 aa10.21□□□□□ -0.77
LINC00643-202ENST00000553426 PXT1Q8NFP0 134 aa10.21□□□□□ -0.77
LINC00643-202ENST00000553426 OR4X2Q8NGF9 303 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms