RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 LINC01587Q99440 93 aa2.47□□□□□ -2.01
LSM6P2-201ENST00000552208 ZSCAN16Q9H4T2 348 aaPredicted RBP2.47□□□□□ -2.01
LSM6P2-201ENST00000552208 TP53TG1Q9Y2A0 90 aa2.47□□□□□ -2.01
LSM6P2-201ENST00000552208 ZNF646O15015 1829 aaPredicted RBP2.47□□□□□ -2.01
LSM6P2-201ENST00000552208 PTPRKQ15262 1439 aa2.46□□□□□ -2.02
LSM6P2-201ENST00000552208 TRAV8-2A0A0B4J237 113 aa2.46□□□□□ -2.02
LSM6P2-201ENST00000552208 EFCAB9A8MZ26 197 aa2.46□□□□□ -2.02
LSM6P2-201ENST00000552208 F5H768 121 aa2.46□□□□□ -2.02
LSM6P2-201ENST00000552208 TMEM250H0YL14 139 aa2.46□□□□□ -2.02
LSM6P2-201ENST00000552208 LHBP01229 141 aa2.46□□□□□ -2.02
LSM6P2-201ENST00000552208 NTF3P20783 257 aa2.46□□□□□ -2.02
LSM6P2-201ENST00000552208 PRTN3P24158 256 aa2.46□□□□□ -2.02
LSM6P2-201ENST00000552208 MAGEA2P43356 314 aa2.46□□□□□ -2.02
LSM6P2-201ENST00000552208 ZNF816Q0VGE8 651 aaPredicted RBP2.46□□□□□ -2.02
LSM6P2-201ENST00000552208 FAM53BQ14153 422 aa2.46□□□□□ -2.02
LSM6P2-201ENST00000552208 LINC00483Q53H64 154 aa2.46□□□□□ -2.02
LSM6P2-201ENST00000552208 COQ5Q5HYK3 327 aa2.46□□□□□ -2.02
LSM6P2-201ENST00000552208 UBE2NLQ5JXB2 153 aa2.46□□□□□ -2.02
LSM6P2-201ENST00000552208 CASP12Q6UXS9 341 aa2.46□□□□□ -2.02
LSM6P2-201ENST00000552208 STK40Q8N2I9 435 aa2.46□□□□□ -2.02
LSM6P2-201ENST00000552208 RIBC1Q8N443 379 aaPredicted RBP2.46□□□□□ -2.02
LSM6P2-201ENST00000552208 ZDHHC22Q8N966 263 aa2.46□□□□□ -2.02
LSM6P2-201ENST00000552208 GATD1Q8NB37 220 aa2.46□□□□□ -2.02
LSM6P2-201ENST00000552208 OR2M3Q8NG83 312 aa2.46□□□□□ -2.02
LSM6P2-201ENST00000552208 OR52E4Q8NGH9 312 aa2.46□□□□□ -2.02
LSM6P2-201ENST00000552208 OR5H2Q8NGV7 314 aa2.46□□□□□ -2.02
LSM6P2-201ENST00000552208 STOML3Q8TAV4 291 aa2.46□□□□□ -2.02
LSM6P2-201ENST00000552208 SMIM19Q96E16 107 aa2.46□□□□□ -2.02
LSM6P2-201ENST00000552208 CYYR1Q96J86 154 aa2.46□□□□□ -2.02
LSM6P2-201ENST00000552208 YPEL4Q96NS1 127 aa2.46□□□□□ -2.02
LSM6P2-201ENST00000552208 OLFM3Q96PB7 478 aa2.46□□□□□ -2.02
LSM6P2-201ENST00000552208 PRSS27Q9BQR3 290 aa2.46□□□□□ -2.02
LSM6P2-201ENST00000552208 EBPLQ9BY08 206 aa2.46□□□□□ -2.02
LSM6P2-201ENST00000552208 ZNF436Q9C0F3 470 aaPredicted RBP2.46□□□□□ -2.02
LSM6P2-201ENST00000552208 NSRP1Q9H0G5 558 aaKnown RBP2.46□□□□□ -2.02
LSM6P2-201ENST00000552208 VCXQ9H320 206 aa2.46□□□□□ -2.02
LSM6P2-201ENST00000552208 UCK1Q9HA47 277 aa2.46□□□□□ -2.02
LSM6P2-201ENST00000552208 TAC3Q9UHF0 121 aa2.46□□□□□ -2.02
LSM6P2-201ENST00000552208 ZNF706Q9Y5V0 76 aaPredicted RBP2.46□□□□□ -2.02
LSM6P2-201ENST00000552208 ZNF780BQ9Y6R6 833 aa2.46□□□□□ -2.02
LSM6P2-201ENST00000552208 TMEM131Q92545 1883 aa2.45□□□□□ -2.02
LSM6P2-201ENST00000552208 C2orf16Q68DN1 1984 aa2.45□□□□□ -2.02
LSM6P2-201ENST00000552208 ATRNO75882 1429 aa2.45□□□□□ -2.02
LSM6P2-201ENST00000552208 NOTCH3Q9UM47 2321 aa2.45□□□□□ -2.02
LSM6P2-201ENST00000552208 IGLV3-16A0A075B6K0 115 aa2.45□□□□□ -2.02
LSM6P2-201ENST00000552208 C9JQL5 133 aa2.45□□□□□ -2.02
LSM6P2-201ENST00000552208 CCRL2O00421 344 aa2.45□□□□□ -2.02
LSM6P2-201ENST00000552208 BIRC5O15392 142 aa2.45□□□□□ -2.02
LSM6P2-201ENST00000552208 OR7C2O60412 319 aa2.45□□□□□ -2.02
LSM6P2-201ENST00000552208 MED6O75586 246 aa2.45□□□□□ -2.02
LSM6P2-201ENST00000552208 PSMG1O95456 288 aa2.45□□□□□ -2.02
LSM6P2-201ENST00000552208 ATP6V1G2O95670 118 aa2.45□□□□□ -2.02
LSM6P2-201ENST00000552208 SOD3P08294 240 aa2.45□□□□□ -2.02
LSM6P2-201ENST00000552208 CD28P10747 220 aa2.45□□□□□ -2.02
LSM6P2-201ENST00000552208 MUC1P15941 1255 aaPredicted RBP2.45□□□□□ -2.02
LSM6P2-201ENST00000552208 ELK4P28324 431 aa2.45□□□□□ -2.02
LSM6P2-201ENST00000552208 TGFBR1P36897 503 aa2.45□□□□□ -2.02
LSM6P2-201ENST00000552208 ATP5G2Q06055 141 aa2.45□□□□□ -2.02
LSM6P2-201ENST00000552208 PTGES3Q15185 160 aaKnown RBP2.45□□□□□ -2.02
LSM6P2-201ENST00000552208 KHDRBS2Q5VWX1 349 aaKnown RBP2.45□□□□□ -2.02
LSM6P2-201ENST00000552208 FAM104BQ5XKR9 115 aa2.45□□□□□ -2.02
LSM6P2-201ENST00000552208 TMEM215Q68D42 235 aa2.45□□□□□ -2.02
LSM6P2-201ENST00000552208 DNM1P34Q6PK57 102 aa2.45□□□□□ -2.02
LSM6P2-201ENST00000552208 FAM19A5Q7Z5A7 132 aaPredicted RBP2.45□□□□□ -2.02
LSM6P2-201ENST00000552208 MTERF4Q7Z6M4 381 aaKnown RBP2.45□□□□□ -2.02
LSM6P2-201ENST00000552208 MARCH3Q86UD3 253 aa2.45□□□□□ -2.02
LSM6P2-201ENST00000552208 OR8J2Q8NGG1 315 aa2.45□□□□□ -2.02
LSM6P2-201ENST00000552208 OR9A2Q8NGT5 310 aa2.45□□□□□ -2.02
LSM6P2-201ENST00000552208 FRZBQ92765 325 aa2.45□□□□□ -2.02
LSM6P2-201ENST00000552208 CLDN23Q96B33 292 aa2.45□□□□□ -2.02
LSM6P2-201ENST00000552208 RBP7Q96R05 134 aa2.45□□□□□ -2.02
LSM6P2-201ENST00000552208 DOK1Q99704 481 aa2.45□□□□□ -2.02
LSM6P2-201ENST00000552208 MARVELD1Q9BSK0 173 aa2.45□□□□□ -2.02
LSM6P2-201ENST00000552208 THTPAQ9BU02 230 aa2.45□□□□□ -2.02
LSM6P2-201ENST00000552208 FBXL15Q9H469 300 aa2.45□□□□□ -2.02
LSM6P2-201ENST00000552208 LINC00574Q9H8X3 128 aa2.45□□□□□ -2.02
LSM6P2-201ENST00000552208 TMEM38BQ9NVV0 291 aa2.45□□□□□ -2.02
LSM6P2-201ENST00000552208 USE1Q9NZ43 259 aa2.45□□□□□ -2.02
LSM6P2-201ENST00000552208 TBL2Q9Y4P3 447 aaKnown RBP2.45□□□□□ -2.02
LSM6P2-201ENST00000552208 OBSCNQ5VST9 7968 aa2.45□□□□□ -2.02
LSM6P2-201ENST00000552208 CLUHO75153 1309 aa2.44□□□□□ -2.02
LSM6P2-201ENST00000552208 RIMS2Q9UQ26 1411 aa2.44□□□□□ -2.02
LSM6P2-201ENST00000552208 TP53BP1Q12888 1972 aaPredicted RBP2.44□□□□□ -2.02
LSM6P2-201ENST00000552208 TINCRA0A1B0GVN0 87 aa2.44□□□□□ -2.02
LSM6P2-201ENST00000552208 K7EPK0 472 aa2.44□□□□□ -2.02
LSM6P2-201ENST00000552208 BET1O15155 118 aa2.44□□□□□ -2.02
LSM6P2-201ENST00000552208 DEXIO95424 95 aa2.44□□□□□ -2.02
LSM6P2-201ENST00000552208 C8orf88P0DMB2 117 aa2.44□□□□□ -2.02
LSM6P2-201ENST00000552208 ATF1P18846 271 aa2.44□□□□□ -2.02
LSM6P2-201ENST00000552208 F8A1P23610 371 aa2.44□□□□□ -2.02
LSM6P2-201ENST00000552208 CNTFRP26992 372 aa2.44□□□□□ -2.02
LSM6P2-201ENST00000552208 GRPRP30550 384 aa2.44□□□□□ -2.02
LSM6P2-201ENST00000552208 ZNF616Q08AN1 781 aa2.44□□□□□ -2.02
LSM6P2-201ENST00000552208 KLHL12Q53G59 568 aa2.44□□□□□ -2.02
LSM6P2-201ENST00000552208 XKRXQ6PP77 449 aa2.44□□□□□ -2.02
LSM6P2-201ENST00000552208 UNQ9165/PRO28630Q6UXU0 137 aa2.44□□□□□ -2.02
LSM6P2-201ENST00000552208 FA2HQ7L5A8 372 aa2.44□□□□□ -2.02
LSM6P2-201ENST00000552208 PAGE2Q7Z2X7 111 aa2.44□□□□□ -2.02
LSM6P2-201ENST00000552208 SLC13A5Q86YT5 568 aaPredicted RBP2.44□□□□□ -2.02
LSM6P2-201ENST00000552208 OR8A1Q8NGG7 326 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms