RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 KCTD20Q7Z5Y7 419 aa17.26■□□□□ 0.35
SMARCC2-210ENST00000550519 COQ2Q96H96 371 aa17.26■□□□□ 0.35
SMARCC2-210ENST00000550519 RHOFQ9HBH0 211 aa17.26■□□□□ 0.35
SMARCC2-210ENST00000550519 KIAA2026Q5HYC2 2103 aa17.26■□□□□ 0.35
SMARCC2-210ENST00000550519 COL7A1Q02388 2944 aa17.25■□□□□ 0.35
SMARCC2-210ENST00000550519 OOSP1A8MZH6 123 aa17.25■□□□□ 0.35
SMARCC2-210ENST00000550519 M0QZK8 103 aa17.25■□□□□ 0.35
SMARCC2-210ENST00000550519 PTGFRP43088 359 aa17.25■□□□□ 0.35
SMARCC2-210ENST00000550519 CCR9P51686 369 aa17.25■□□□□ 0.35
SMARCC2-210ENST00000550519 KRTAP10-11P60412 298 aa17.25■□□□□ 0.35
SMARCC2-210ENST00000550519 Q6P435 159 aa17.25■□□□□ 0.35
SMARCC2-210ENST00000550519 CHST4Q8NCG5 386 aa17.25■□□□□ 0.35
SMARCC2-210ENST00000550519 OR4D6Q8NGJ1 314 aa17.25■□□□□ 0.35
SMARCC2-210ENST00000550519 OR10AC1Q8NH08 325 aa17.25■□□□□ 0.35
SMARCC2-210ENST00000550519 BCAS4Q8TDM0 211 aa17.25■□□□□ 0.35
SMARCC2-210ENST00000550519 SPACA5Q96QH8 159 aa17.25■□□□□ 0.35
SMARCC2-210ENST00000550519 RIBC2Q9H4K1 309 aa17.25■□□□□ 0.35
SMARCC2-210ENST00000550519 PCDHGB5Q9Y5G0 923 aa17.25■□□□□ 0.35
SMARCC2-210ENST00000550519 J3QRE1 110 aa17.24■□□□□ 0.35
SMARCC2-210ENST00000550519 TOR1AO14656 332 aa17.24■□□□□ 0.35
SMARCC2-210ENST00000550519 FCGR1AP12314 374 aa17.24■□□□□ 0.35
SMARCC2-210ENST00000550519 ZNF44P15621 663 aa17.24■□□□□ 0.35
SMARCC2-210ENST00000550519 PRRX1P54821 245 aa17.24■□□□□ 0.35
SMARCC2-210ENST00000550519 EGFEM1PQ0D2K5 195 aa17.24■□□□□ 0.35
SMARCC2-210ENST00000550519 C17orf58Q2M2W7 97 aa17.24■□□□□ 0.35
SMARCC2-210ENST00000550519 KRBOX4Q5JUW0 171 aa17.24■□□□□ 0.35
SMARCC2-210ENST00000550519 UTF1Q5T230 341 aa17.24■□□□□ 0.35
SMARCC2-210ENST00000550519 CCDC144NLQ6NUI1 221 aa17.24■□□□□ 0.35
SMARCC2-210ENST00000550519 SAXO1Q8IYX7 474 aa17.24■□□□□ 0.35
SMARCC2-210ENST00000550519 OSR2Q8N2R0 312 aa17.24■□□□□ 0.35
SMARCC2-210ENST00000550519 OR51A4Q8NGJ6 313 aa17.24■□□□□ 0.35
SMARCC2-210ENST00000550519 OR5D18Q8NGL1 313 aa17.24■□□□□ 0.35
SMARCC2-210ENST00000550519 WI2-2373I1.2A0A1W2PRP0 233 aa17.23■□□□□ 0.35
SMARCC2-210ENST00000550519 FAM90A18PA6NE21 464 aa17.23■□□□□ 0.35
SMARCC2-210ENST00000550519 FAM90A16PA6NEW6 464 aa17.23■□□□□ 0.35
SMARCC2-210ENST00000550519 FAM90A20PA6NIJ5 464 aa17.23■□□□□ 0.35
SMARCC2-210ENST00000550519 ZNF729A6NN14 1252 aaPredicted RBP17.23■□□□□ 0.35
SMARCC2-210ENST00000550519 FAM90A9PA6NNJ1 464 aa17.23■□□□□ 0.35
SMARCC2-210ENST00000550519 FAM90A12PA8MX19 464 aa17.23■□□□□ 0.35
SMARCC2-210ENST00000550519 FAM90A5PA8MXJ8 464 aa17.23■□□□□ 0.35
SMARCC2-210ENST00000550519 SLC33A1O00400 549 aaPredicted RBP17.23■□□□□ 0.35
SMARCC2-210ENST00000550519 CLIC3O95833 236 aa17.23■□□□□ 0.35
SMARCC2-210ENST00000550519 FAM90A15PP0C7V4 464 aa17.23■□□□□ 0.35
SMARCC2-210ENST00000550519 FAM90A13PP0C7W8 464 aa17.23■□□□□ 0.35
SMARCC2-210ENST00000550519 FAM90A14PP0C7W9 464 aa17.23■□□□□ 0.35
SMARCC2-210ENST00000550519 FAM90A24PP0C7X0 464 aa17.23■□□□□ 0.35
SMARCC2-210ENST00000550519 OCM2P0CE71 109 aa17.23■□□□□ 0.35
SMARCC2-210ENST00000550519 OCMP0CE72 109 aaPredicted RBP17.23■□□□□ 0.35
SMARCC2-210ENST00000550519 MNDAP41218 407 aa17.23■□□□□ 0.35
SMARCC2-210ENST00000550519 OR3A4PP47883 348 aa17.23■□□□□ 0.35
SMARCC2-210ENST00000550519 SCN1BQ07699 218 aa17.23■□□□□ 0.35
SMARCC2-210ENST00000550519 LINC00482Q8N8I6 264 aa17.23■□□□□ 0.35
SMARCC2-210ENST00000550519 OR13C9Q8NGT0 318 aa17.23■□□□□ 0.35
SMARCC2-210ENST00000550519 TRUB1Q8WWH5 349 aaKnown RBP17.23■□□□□ 0.35
SMARCC2-210ENST00000550519 OSBPL10Q9BXB5 764 aa17.23■□□□□ 0.35
SMARCC2-210ENST00000550519 OAZ3Q9UMX2 235 aa17.23■□□□□ 0.35
SMARCC2-210ENST00000550519 KMT2CQ8NEZ4 4911 aaKnown RBP17.23■□□□□ 0.35
SMARCC2-210ENST00000550519 SLC16A6O15403 523 aa17.22■□□□□ 0.35
SMARCC2-210ENST00000550519 CGB3P0DN86 165 aa17.22■□□□□ 0.35
SMARCC2-210ENST00000550519 CGB7P0DN87 165 aa17.22■□□□□ 0.35
SMARCC2-210ENST00000550519 CDK5R1Q15078 307 aa17.22■□□□□ 0.35
SMARCC2-210ENST00000550519 KHDC1LQ5JSQ8 128 aa17.22■□□□□ 0.35
SMARCC2-210ENST00000550519 THNSL2Q86YJ6 484 aa17.22■□□□□ 0.35
SMARCC2-210ENST00000550519 KIRREL1Q96J84 757 aa17.22■□□□□ 0.35
SMARCC2-210ENST00000550519 ING3Q9NXR8 418 aa17.22■□□□□ 0.35
SMARCC2-210ENST00000550519 OR6C3Q9NZP0 311 aa17.22■□□□□ 0.35
SMARCC2-210ENST00000550519 KBTBD11-OT1A0A1B0GTJ5 212 aa17.21■□□□□ 0.35
SMARCC2-210ENST00000550519 DAPL1A0PJW8 107 aa17.21■□□□□ 0.35
SMARCC2-210ENST00000550519 OR4C45A6NMZ5 311 aa17.21■□□□□ 0.35
SMARCC2-210ENST00000550519 HTR1AP08908 422 aa17.21■□□□□ 0.35
SMARCC2-210ENST00000550519 FAM106CPP0CH98 169 aa17.21■□□□□ 0.35
SMARCC2-210ENST00000550519 BNIP1Q12981 228 aa17.21■□□□□ 0.35
SMARCC2-210ENST00000550519 RBM39Q14498 530 aaKnown RBP17.21■□□□□ 0.35
SMARCC2-210ENST00000550519 ATXN7L3Q14CW9 347 aaPredicted RBP17.21■□□□□ 0.35
SMARCC2-210ENST00000550519 C9orf152Q5JTZ5 239 aa17.21■□□□□ 0.35
SMARCC2-210ENST00000550519 SLC25A30Q5SVS4 291 aa17.21■□□□□ 0.35
SMARCC2-210ENST00000550519 C11orf87Q6NUJ2 197 aa17.21■□□□□ 0.35
SMARCC2-210ENST00000550519 OR13C3Q8NGS6 347 aa17.21■□□□□ 0.35
SMARCC2-210ENST00000550519 OR9G1Q8NH87 305 aa17.21■□□□□ 0.35
SMARCC2-210ENST00000550519 CENPNQ96H22 339 aaPredicted RBP17.21■□□□□ 0.35
SMARCC2-210ENST00000550519 PPIL3Q9H2H8 161 aaKnown RBP17.21■□□□□ 0.35
SMARCC2-210ENST00000550519 NEK6Q9HC98 313 aa17.21■□□□□ 0.35
SMARCC2-210ENST00000550519 MYRFQ9Y2G1 1151 aa17.21■□□□□ 0.35
SMARCC2-210ENST00000550519 MOB4Q9Y3A3 225 aa17.21■□□□□ 0.35
SMARCC2-210ENST00000550519 HSPE1-MOB4S4R3N1 261 aa17.21■□□□□ 0.35
SMARCC2-210ENST00000550519 PSMB11A5LHX3 300 aa17.2■□□□□ 0.34
SMARCC2-210ENST00000550519 DEGS1O15121 323 aa17.2■□□□□ 0.34
SMARCC2-210ENST00000550519 ZP1P60852 638 aa17.2■□□□□ 0.34
SMARCC2-210ENST00000550519 DEFB121Q5J5C9 76 aa17.2■□□□□ 0.34
SMARCC2-210ENST00000550519 ETV3LQ6ZN32 361 aa17.2■□□□□ 0.34
SMARCC2-210ENST00000550519 MRPL41Q8IXM3 137 aaKnown RBP17.2■□□□□ 0.34
SMARCC2-210ENST00000550519 OR51T1Q8NGJ9 327 aa17.2■□□□□ 0.34
SMARCC2-210ENST00000550519 RNFT2Q96EX2 444 aa17.2■□□□□ 0.34
SMARCC2-210ENST00000550519 PELI1Q96FA3 418 aa17.2■□□□□ 0.34
SMARCC2-210ENST00000550519 HRASLS5Q96KN8 279 aa17.2■□□□□ 0.34
SMARCC2-210ENST00000550519 ZCCHC4Q9H5U6 513 aa17.2■□□□□ 0.34
SMARCC2-210ENST00000550519 PCDHB16Q9NRJ7 776 aa17.2■□□□□ 0.34
SMARCC2-210ENST00000550519 TENM3Q9P273 2699 aa17.2■□□□□ 0.34
SMARCC2-210ENST00000550519 NFYBP25208 207 aa17.19■□□□□ 0.34
SMARCC2-210ENST00000550519 HOXD3P31249 432 aaPredicted RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms