RNA–Protein interactions for RNA: ENST00000549358.5

TRAFD1-206, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 4

Gene TRAFD1, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-206ENST00000549358 IKZF2Q9UKS7 526 aa8.4□□□□□ -1.06
TRAFD1-206ENST00000549358 AMMECR1Q9Y4X0 333 aaPredicted RBP8.4□□□□□ -1.06
TRAFD1-206ENST00000549358 FUOMA2VDF0 154 aa8.39□□□□□ -1.07
TRAFD1-206ENST00000549358 LOC110117498-PIK3R3F6TDL0 507 aa8.39□□□□□ -1.07
TRAFD1-206ENST00000549358 H3BSH0 61 aa8.39□□□□□ -1.07
TRAFD1-206ENST00000549358 J3QR06 171 aa8.39□□□□□ -1.07
TRAFD1-206ENST00000549358 ENTPD6O75354 484 aa8.39□□□□□ -1.07
TRAFD1-206ENST00000549358 IGHG4P01861 327 aa8.39□□□□□ -1.07
TRAFD1-206ENST00000549358 MRPL3P09001 348 aaKnown RBP8.39□□□□□ -1.07
TRAFD1-206ENST00000549358 IGHV4-30-4P0DP06 118 aa8.39□□□□□ -1.07
TRAFD1-206ENST00000549358 PRKACAP17612 351 aa8.39□□□□□ -1.07
TRAFD1-206ENST00000549358 BCL3P20749 454 aa8.39□□□□□ -1.07
TRAFD1-206ENST00000549358 MYF6P23409 242 aa8.39□□□□□ -1.07
TRAFD1-206ENST00000549358 FUT6P51993 359 aa8.39□□□□□ -1.07
TRAFD1-206ENST00000549358 RIDAP52758 137 aaKnown RBP8.39□□□□□ -1.07
TRAFD1-206ENST00000549358 CDC42P60953 191 aa8.39□□□□□ -1.07
TRAFD1-206ENST00000549358 MADCAM1Q13477 382 aa8.39□□□□□ -1.07
TRAFD1-206ENST00000549358 ZNF146Q15072 292 aa8.39□□□□□ -1.07
TRAFD1-206ENST00000549358 C17orf58Q2M2W7 97 aa8.39□□□□□ -1.07
TRAFD1-206ENST00000549358 BCL2L15Q5TBC7 163 aa8.39□□□□□ -1.07
TRAFD1-206ENST00000549358 ASPHD1Q5U4P2 390 aa8.39□□□□□ -1.07
TRAFD1-206ENST00000549358 FAM53AQ6NSI3 398 aaPredicted RBP8.39□□□□□ -1.07
TRAFD1-206ENST00000549358 TGIF2LXQ8IUE1 241 aa8.39□□□□□ -1.07
TRAFD1-206ENST00000549358 Q8IYB0 196 aa8.39□□□□□ -1.07
TRAFD1-206ENST00000549358 ELMOD2Q8IZ81 293 aa8.39□□□□□ -1.07
TRAFD1-206ENST00000549358 DCUN1D4Q92564 292 aa8.39□□□□□ -1.07
TRAFD1-206ENST00000549358 OR5B12Q96R08 314 aa8.39□□□□□ -1.07
TRAFD1-206ENST00000549358 YIPF3Q9GZM5 350 aa8.39□□□□□ -1.07
TRAFD1-206ENST00000549358 LOC100996750A0A140TA64 210 aa8.38□□□□□ -1.07
TRAFD1-206ENST00000549358 ODAMA1E959 279 aa8.38□□□□□ -1.07
TRAFD1-206ENST00000549358 DHRS7CA6NNS2 312 aa8.38□□□□□ -1.07
TRAFD1-206ENST00000549358 OVOL1O14753 267 aa8.38□□□□□ -1.07
TRAFD1-206ENST00000549358 SH2D1BO14796 132 aa8.38□□□□□ -1.07
TRAFD1-206ENST00000549358 ARPC2O15144 300 aa8.38□□□□□ -1.07
TRAFD1-206ENST00000549358 MAGEB4O15481 346 aaPredicted RBP8.38□□□□□ -1.07
TRAFD1-206ENST00000549358 RRP9O43818 475 aaKnown RBP8.38□□□□□ -1.07
TRAFD1-206ENST00000549358 CCDC22O60826 627 aa8.38□□□□□ -1.07
TRAFD1-206ENST00000549358 SRSF10O75494 262 aaKnown RBP8.38□□□□□ -1.07
TRAFD1-206ENST00000549358 OR2H2O95918 312 aa8.38□□□□□ -1.07
TRAFD1-206ENST00000549358 VDAC1P21796 283 aa8.38□□□□□ -1.07
TRAFD1-206ENST00000549358 SLC2A5P22732 501 aa8.38□□□□□ -1.07
TRAFD1-206ENST00000549358 PSMB8P28062 276 aa8.38□□□□□ -1.07
TRAFD1-206ENST00000549358 RAB7AP51149 207 aa8.38□□□□□ -1.07
TRAFD1-206ENST00000549358 CFHR3Q02985 330 aa8.38□□□□□ -1.07
TRAFD1-206ENST00000549358 GABPB1Q06547 395 aaPredicted RBP8.38□□□□□ -1.07
TRAFD1-206ENST00000549358 SCN1BQ07699 218 aa8.38□□□□□ -1.07
TRAFD1-206ENST00000549358 ZNF616Q08AN1 781 aa8.38□□□□□ -1.07
TRAFD1-206ENST00000549358 BNIP1Q12981 228 aa8.38□□□□□ -1.07
TRAFD1-206ENST00000549358 APOFQ13790 326 aa8.38□□□□□ -1.07
TRAFD1-206ENST00000549358 GINS1Q14691 196 aa8.38□□□□□ -1.07
TRAFD1-206ENST00000549358 KRBOX4Q5JUW0 171 aa8.38□□□□□ -1.07
TRAFD1-206ENST00000549358 SPIN3Q5JUX0 258 aa8.38□□□□□ -1.07
TRAFD1-206ENST00000549358 SLC35D3Q5M8T2 416 aa8.38□□□□□ -1.07
TRAFD1-206ENST00000549358 MOB3BQ86TA1 216 aa8.38□□□□□ -1.07
TRAFD1-206ENST00000549358 Q8N9W7 124 aa8.38□□□□□ -1.07
TRAFD1-206ENST00000549358 ASB17Q8WXJ9 295 aa8.38□□□□□ -1.07
TRAFD1-206ENST00000549358 BORCS8Q96FH0 119 aa8.38□□□□□ -1.07
TRAFD1-206ENST00000549358 KIRREL1Q96J84 757 aa8.38□□□□□ -1.07
TRAFD1-206ENST00000549358 EAF1Q96JC9 268 aaPredicted RBP8.38□□□□□ -1.07
TRAFD1-206ENST00000549358 APOL4Q9BPW4 351 aa8.38□□□□□ -1.07
TRAFD1-206ENST00000549358 KRTAP4-6Q9BYQ5 205 aa8.38□□□□□ -1.07
TRAFD1-206ENST00000549358 GNB4Q9HAV0 340 aa8.38□□□□□ -1.07
TRAFD1-206ENST00000549358 PLEKHA1Q9HB21 404 aa8.38□□□□□ -1.07
TRAFD1-206ENST00000549358 EXOSC4Q9NPD3 245 aaKnown RBP8.38□□□□□ -1.07
TRAFD1-206ENST00000549358 LIN7CQ9NUP9 197 aaKnown RBP8.38□□□□□ -1.07
TRAFD1-206ENST00000549358 OR52A1Q9UKL2 312 aa8.38□□□□□ -1.07
TRAFD1-206ENST00000549358 COPS3Q9UNS2 423 aa8.38□□□□□ -1.07
TRAFD1-206ENST00000549358 GSTK1Q9Y2Q3 226 aa8.38□□□□□ -1.07
TRAFD1-206ENST00000549358 SAMHD1Q9Y3Z3 626 aaKnown RBP8.38□□□□□ -1.07
TRAFD1-206ENST00000549358 DSCAML1Q8TD84 2053 aa8.38□□□□□ -1.07
TRAFD1-206ENST00000549358 IGHV3-72A0A0B4J1Y9 119 aa8.37□□□□□ -1.07
TRAFD1-206ENST00000549358 TRBV2A0A0J9YWF9 115 aa8.37□□□□□ -1.07
TRAFD1-206ENST00000549358 KBTBD11-OT1A0A1B0GTJ5 212 aa8.37□□□□□ -1.07
TRAFD1-206ENST00000549358 ZNF729A6NN14 1252 aaPredicted RBP8.37□□□□□ -1.07
TRAFD1-206ENST00000549358 I3L521 148 aa8.37□□□□□ -1.07
TRAFD1-206ENST00000549358 MPZL2O60487 215 aa8.37□□□□□ -1.07
TRAFD1-206ENST00000549358 E2F6O75461 281 aa8.37□□□□□ -1.07
TRAFD1-206ENST00000549358 CYB5AP00167 134 aa8.37□□□□□ -1.07
TRAFD1-206ENST00000549358 HSD17B1P14061 328 aa8.37□□□□□ -1.07
TRAFD1-206ENST00000549358 ATF4P18848 351 aaPredicted RBP8.37□□□□□ -1.07
TRAFD1-206ENST00000549358 GNG10P50151 68 aa8.37□□□□□ -1.07
TRAFD1-206ENST00000549358 GNB1P62873 340 aa8.37□□□□□ -1.07
TRAFD1-206ENST00000549358 EBI3Q14213 229 aa8.37□□□□□ -1.07
TRAFD1-206ENST00000549358 LTC4SQ16873 150 aa8.37□□□□□ -1.07
TRAFD1-206ENST00000549358 ODF4Q2M2E3 257 aa8.37□□□□□ -1.07
TRAFD1-206ENST00000549358 TMEM65Q6PI78 240 aa8.37□□□□□ -1.07
TRAFD1-206ENST00000549358 PLEKHG7Q6ZR37 379 aa8.37□□□□□ -1.07
TRAFD1-206ENST00000549358 Q6ZSR3 168 aa8.37□□□□□ -1.07
TRAFD1-206ENST00000549358 CATSPERDQ86XM0 798 aa8.37□□□□□ -1.07
TRAFD1-206ENST00000549358 OR8H3Q8N146 312 aa8.37□□□□□ -1.07
TRAFD1-206ENST00000549358 HAVCR2Q8TDQ0 301 aa8.37□□□□□ -1.07
TRAFD1-206ENST00000549358 DLX4Q92988 240 aaPredicted RBP8.37□□□□□ -1.07
TRAFD1-206ENST00000549358 ST6GALNAC6Q969X2 333 aa8.37□□□□□ -1.07
TRAFD1-206ENST00000549358 CMTM5Q96DZ9 223 aa8.37□□□□□ -1.07
TRAFD1-206ENST00000549358 UBE2E2Q96LR5 201 aa8.37□□□□□ -1.07
TRAFD1-206ENST00000549358 KCTD7Q96MP8 289 aa8.37□□□□□ -1.07
TRAFD1-206ENST00000549358 FEVQ99581 238 aa8.37□□□□□ -1.07
TRAFD1-206ENST00000549358 RASL11BQ9BPW5 248 aa8.37□□□□□ -1.07
TRAFD1-206ENST00000549358 HSPB9Q9BQS6 159 aa8.37□□□□□ -1.07
TRAFD1-206ENST00000549358 SPATA25Q9BR10 227 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms