RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 WIPI1Q5MNZ9 446 aaPredicted RBP9.61□□□□□ -0.87
LINC00661-204ENST00000549354 EIF5AL1Q6IS14 154 aaKnown RBP9.61□□□□□ -0.87
LINC00661-204ENST00000549354 ZFP62Q8NB50 900 aaPredicted RBP9.61□□□□□ -0.87
LINC00661-204ENST00000549354 THOC3Q96J01 351 aaKnown RBP9.61□□□□□ -0.87
LINC00661-204ENST00000549354 SMIM8Q96KF7 97 aa9.61□□□□□ -0.87
LINC00661-204ENST00000549354 AQP10Q96PS8 301 aa9.61□□□□□ -0.87
LINC00661-204ENST00000549354 GSN-AS1Q9NRJ2 163 aa9.61□□□□□ -0.87
LINC00661-204ENST00000549354 DEPPQ9NTK1 212 aa9.61□□□□□ -0.87
LINC00661-204ENST00000549354 SPENQ96T58 3664 aaKnown RBP9.61□□□□□ -0.87
LINC00661-204ENST00000549354 SVEP1Q4LDE5 3571 aa9.6□□□□□ -0.87
LINC00661-204ENST00000549354 TRBV6-7A0A0A0MS04 114 aa9.6□□□□□ -0.87
LINC00661-204ENST00000549354 CNOT4O95628 575 aaKnown RBP9.6□□□□□ -0.87
LINC00661-204ENST00000549354 GSTP1P09211 210 aaKnown RBP9.6□□□□□ -0.87
LINC00661-204ENST00000549354 PET100P0DJ07 73 aa9.6□□□□□ -0.87
LINC00661-204ENST00000549354 RPS2P15880 293 aaKnown RBP9.6□□□□□ -0.87
LINC00661-204ENST00000549354 PPP1CCP36873 323 aaKnown RBP9.6□□□□□ -0.87
LINC00661-204ENST00000549354 NAAAQ02083 359 aa9.6□□□□□ -0.87
LINC00661-204ENST00000549354 GUK1Q16774 197 aa9.6□□□□□ -0.87
LINC00661-204ENST00000549354 DCAF10Q5QP82 559 aa9.6□□□□□ -0.87
LINC00661-204ENST00000549354 SLC25A24Q6NUK1 477 aa9.6□□□□□ -0.87
LINC00661-204ENST00000549354 FOXL2NBQ6ZUU3 175 aa9.6□□□□□ -0.87
LINC00661-204ENST00000549354 TMEM54Q969K7 222 aa9.6□□□□□ -0.87
LINC00661-204ENST00000549354 LYZL4Q96KX0 146 aa9.6□□□□□ -0.87
LINC00661-204ENST00000549354 CACFD1Q9UGQ2 172 aa9.6□□□□□ -0.87
LINC00661-204ENST00000549354 ZNF107Q9UII5 783 aaPredicted RBP9.6□□□□□ -0.87
LINC00661-204ENST00000549354 MEMO1Q9Y316 297 aa9.6□□□□□ -0.87
LINC00661-204ENST00000549354 CSMD1Q96PZ7 3565 aa9.6□□□□□ -0.87
LINC00661-204ENST00000549354 HS3ST1O14792 307 aa9.6□□□□□ -0.87
LINC00661-204ENST00000549354 RPS10P46783 165 aaKnown RBP9.6□□□□□ -0.87
LINC00661-204ENST00000549354 C4orf17Q53FE4 359 aa9.6□□□□□ -0.87
LINC00661-204ENST00000549354 OR2B11Q5JQS5 317 aa9.6□□□□□ -0.87
LINC00661-204ENST00000549354 C9orf152Q5JTZ5 239 aa9.6□□□□□ -0.87
LINC00661-204ENST00000549354 FBXW12Q6X9E4 464 aa9.6□□□□□ -0.87
LINC00661-204ENST00000549354 ZNF565Q8N9K5 539 aa9.6□□□□□ -0.87
LINC00661-204ENST00000549354 OR52M1Q8NGK5 317 aa9.6□□□□□ -0.87
LINC00661-204ENST00000549354 MARS2Q96GW9 593 aaKnown RBP9.6□□□□□ -0.87
LINC00661-204ENST00000549354 SF3B5Q9BWJ5 86 aaKnown RBP9.6□□□□□ -0.87
LINC00661-204ENST00000549354 WFDC1Q9HC57 220 aa9.6□□□□□ -0.87
LINC00661-204ENST00000549354 C1orf123Q9NWV4 160 aa9.6□□□□□ -0.87
LINC00661-204ENST00000549354 OSGIN2Q9Y236 505 aa9.6□□□□□ -0.87
LINC00661-204ENST00000549354 A0A0J9YW62 118 aa9.59□□□□□ -0.87
LINC00661-204ENST00000549354 HSD17B6O14756 317 aa9.59□□□□□ -0.87
LINC00661-204ENST00000549354 NEURL1O76050 574 aa9.59□□□□□ -0.87
LINC00661-204ENST00000549354 LY86O95711 162 aa9.59□□□□□ -0.87
LINC00661-204ENST00000549354 DVL1P1P54792 670 aaPredicted RBP9.59□□□□□ -0.87
LINC00661-204ENST00000549354 RUNX1Q01196 453 aa9.59□□□□□ -0.87
LINC00661-204ENST00000549354 TCF15Q12870 199 aa9.59□□□□□ -0.87
LINC00661-204ENST00000549354 VAX1Q5SQQ9 334 aa9.59□□□□□ -0.87
LINC00661-204ENST00000549354 IGF2-ASQ6U949 168 aa9.59□□□□□ -0.87
LINC00661-204ENST00000549354 OR51H1Q8NH63 302 aa9.59□□□□□ -0.87
LINC00661-204ENST00000549354 FGFBP3Q8TAT2 258 aa9.59□□□□□ -0.87
LINC00661-204ENST00000549354 ABHD3Q8WU67 409 aa9.59□□□□□ -0.87
LINC00661-204ENST00000549354 ADGRG7Q96K78 797 aa9.59□□□□□ -0.87
LINC00661-204ENST00000549354 FAM24AA6NFZ4 105 aa9.59□□□□□ -0.87
LINC00661-204ENST00000549354 TLX3O43711 291 aaPredicted RBP9.59□□□□□ -0.87
LINC00661-204ENST00000549354 CST4P01036 141 aa9.59□□□□□ -0.87
LINC00661-204ENST00000549354 MBPP02686 304 aaPredicted RBP9.59□□□□□ -0.87
LINC00661-204ENST00000549354 NPBWR2P48146 333 aa9.59□□□□□ -0.87
LINC00661-204ENST00000549354 RAC3P60763 192 aa9.59□□□□□ -0.87
LINC00661-204ENST00000549354 C10orf91Q5T1B1 145 aa9.59□□□□□ -0.87
LINC00661-204ENST00000549354 C10orf128Q5T292 105 aa9.59□□□□□ -0.87
LINC00661-204ENST00000549354 BTNL8Q6UX41 500 aa9.59□□□□□ -0.87
LINC00661-204ENST00000549354 GGNQ86UU5 652 aa9.59□□□□□ -0.87
LINC00661-204ENST00000549354 GPR137CQ8N3F9 429 aa9.59□□□□□ -0.87
LINC00661-204ENST00000549354 RDH5Q92781 318 aa9.59□□□□□ -0.87
LINC00661-204ENST00000549354 BORCS8Q96FH0 119 aa9.59□□□□□ -0.87
LINC00661-204ENST00000549354 RFPL3SP0C7P2 107 aa9.59□□□□□ -0.87
LINC00661-204ENST00000549354 NR2C1P13056 603 aa9.59□□□□□ -0.87
LINC00661-204ENST00000549354 GNRHRP30968 328 aa9.59□□□□□ -0.87
LINC00661-204ENST00000549354 GSK3AP49840 483 aa9.59□□□□□ -0.87
LINC00661-204ENST00000549354 SULT1A2P50226 295 aa9.59□□□□□ -0.87
LINC00661-204ENST00000549354 SOX8P57073 446 aa9.59□□□□□ -0.87
LINC00661-204ENST00000549354 PLCXD3Q63HM9 321 aa9.59□□□□□ -0.87
LINC00661-204ENST00000549354 SLC25A26Q70HW3 274 aa9.59□□□□□ -0.87
LINC00661-204ENST00000549354 TMEM123Q8N131 208 aa9.59□□□□□ -0.87
LINC00661-204ENST00000549354 RTN4IP1Q8WWV3 396 aaPredicted RBP9.59□□□□□ -0.87
LINC00661-204ENST00000549354 INTS12Q96CB8 462 aaKnown RBP9.59□□□□□ -0.87
LINC00661-204ENST00000549354 SCGB3A2Q96PL1 93 aa9.59□□□□□ -0.87
LINC00661-204ENST00000549354 HS3ST6Q96QI5 342 aa9.59□□□□□ -0.87
LINC00661-204ENST00000549354 IL17BQ9UHF5 180 aa9.59□□□□□ -0.87
LINC00661-204ENST00000549354 FAM166BA8MTA8 275 aa9.58□□□□□ -0.88
LINC00661-204ENST00000549354 IGHV3-13P01766 116 aa9.58□□□□□ -0.88
LINC00661-204ENST00000549354 IGHV3-7P01780 117 aa9.58□□□□□ -0.88
LINC00661-204ENST00000549354 CD5P06127 495 aa9.58□□□□□ -0.88
LINC00661-204ENST00000549354 TBPP20226 339 aa9.58□□□□□ -0.88
LINC00661-204ENST00000549354 FOXG1P55316 489 aaPredicted RBP9.58□□□□□ -0.88
LINC00661-204ENST00000549354 GFRA1P56159 465 aa9.58□□□□□ -0.88
LINC00661-204ENST00000549354 POLR2GP62487 172 aaKnown RBP eCLIP9.58□□□□□ -0.88
LINC00661-204ENST00000549354 TSC22D1Q15714 1073 aa9.58□□□□□ -0.88
LINC00661-204ENST00000549354 ZNF343Q6P1L6 599 aa9.58□□□□□ -0.88
LINC00661-204ENST00000549354 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.58□□□□□ -0.88
LINC00661-204ENST00000549354 ZIC4Q8N9L1 334 aa9.58□□□□□ -0.88
LINC00661-204ENST00000549354 EMG1Q92979 244 aaKnown RBP9.58□□□□□ -0.88
LINC00661-204ENST00000549354 FAM173AQ9BQD7 235 aa9.58□□□□□ -0.88
LINC00661-204ENST00000549354 CALHM2Q9HA72 323 aa9.58□□□□□ -0.88
LINC00661-204ENST00000549354 KCNJ16Q9NPI9 418 aa9.58□□□□□ -0.88
LINC00661-204ENST00000549354 PINLYPA6NC86 204 aa9.58□□□□□ -0.88
LINC00661-204ENST00000549354 NDUFS6O75380 124 aaKnown RBP9.58□□□□□ -0.88
LINC00661-204ENST00000549354 ZNF32P17041 273 aa9.58□□□□□ -0.88
LINC00661-204ENST00000549354 TAS2R46P59540 309 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms