RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 SCPEP1Q9HB40 452 aa6.79□□□□□ -1.32
DEPDC4-207ENST00000549249 PLEKHJ1Q9NW61 149 aa6.79□□□□□ -1.32
DEPDC4-207ENST00000549249 AK3Q9UIJ7 227 aa6.79□□□□□ -1.32
DEPDC4-207ENST00000549249 USF3Q68DE3 2245 aa6.78□□□□□ -1.32
DEPDC4-207ENST00000549249 ITPR2Q14571 2701 aa6.78□□□□□ -1.32
DEPDC4-207ENST00000549249 IGKV1D-17A0A075B6S4 117 aa6.78□□□□□ -1.32
DEPDC4-207ENST00000549249 IGHV3OR15-7A0A075B7D8 119 aa6.78□□□□□ -1.32
DEPDC4-207ENST00000549249 ANKRD20A5PA0PJZ0 165 aa6.78□□□□□ -1.32
DEPDC4-207ENST00000549249 UBE2QL1A1L167 161 aa6.78□□□□□ -1.32
DEPDC4-207ENST00000549249 SERPINE3A8MV23 424 aa6.78□□□□□ -1.32
DEPDC4-207ENST00000549249 SLC33A1O00400 549 aaPredicted RBP6.78□□□□□ -1.32
DEPDC4-207ENST00000549249 HSPB6O14558 160 aa6.78□□□□□ -1.32
DEPDC4-207ENST00000549249 TPD52L2O43399 206 aaKnown RBP6.78□□□□□ -1.32
DEPDC4-207ENST00000549249 CA11O75493 328 aa6.78□□□□□ -1.32
DEPDC4-207ENST00000549249 OR2H2O95918 312 aa6.78□□□□□ -1.32
DEPDC4-207ENST00000549249 HAND1O96004 215 aa6.78□□□□□ -1.32
DEPDC4-207ENST00000549249 KNG1P01042 644 aa6.78□□□□□ -1.32
DEPDC4-207ENST00000549249 H2AFB1P0C5Y9 115 aa6.78□□□□□ -1.32
DEPDC4-207ENST00000549249 H2AFB2P0C5Z0 115 aa6.78□□□□□ -1.32
DEPDC4-207ENST00000549249 PSG2P11465 335 aa6.78□□□□□ -1.32
DEPDC4-207ENST00000549249 SPNP16150 400 aa6.78□□□□□ -1.32
DEPDC4-207ENST00000549249 TNFRSF1AP19438 455 aa6.78□□□□□ -1.32
DEPDC4-207ENST00000549249 AMY2BP19961 511 aa6.78□□□□□ -1.32
DEPDC4-207ENST00000549249 FUT3P21217 361 aa6.78□□□□□ -1.32
DEPDC4-207ENST00000549249 BTCP35070 178 aa6.78□□□□□ -1.32
DEPDC4-207ENST00000549249 RFX2P48378 723 aa6.78□□□□□ -1.32
DEPDC4-207ENST00000549249 GNG2P59768 71 aa6.78□□□□□ -1.32
DEPDC4-207ENST00000549249 SCN1BQ07699 218 aa6.78□□□□□ -1.32
DEPDC4-207ENST00000549249 ASAH1Q13510 395 aa6.78□□□□□ -1.32
DEPDC4-207ENST00000549249 SMIM21Q3B7S5 101 aa6.78□□□□□ -1.32
DEPDC4-207ENST00000549249 PCGF3Q3KNV8 242 aa6.78□□□□□ -1.32
DEPDC4-207ENST00000549249 SPIN3Q5JUX0 258 aa6.78□□□□□ -1.32
DEPDC4-207ENST00000549249 ATAD3CQ5T2N8 411 aa6.78□□□□□ -1.32
DEPDC4-207ENST00000549249 AGAP6Q5VW22 663 aa6.78□□□□□ -1.32
DEPDC4-207ENST00000549249 ZNF57Q68EA5 555 aaPredicted RBP6.78□□□□□ -1.32
DEPDC4-207ENST00000549249 SFRP4Q6FHJ7 346 aaPredicted RBP6.78□□□□□ -1.32
DEPDC4-207ENST00000549249 TRAPPC6BQ86SZ2 158 aa6.78□□□□□ -1.32
DEPDC4-207ENST00000549249 CD177Q8N6Q3 437 aa6.78□□□□□ -1.32
DEPDC4-207ENST00000549249 BOLLQ8N9W6 283 aaKnown RBP6.78□□□□□ -1.32
DEPDC4-207ENST00000549249 POC5Q8NA72 575 aa6.78□□□□□ -1.32
DEPDC4-207ENST00000549249 SUMF2Q8NBJ7 301 aa6.78□□□□□ -1.32
DEPDC4-207ENST00000549249 RDH5Q92781 318 aa6.78□□□□□ -1.32
DEPDC4-207ENST00000549249 SSBP4Q9BWG4 385 aaPredicted RBP6.78□□□□□ -1.32
DEPDC4-207ENST00000549249 CACNG6Q9BXT2 260 aa6.78□□□□□ -1.32
DEPDC4-207ENST00000549249 MS4A5Q9H3V2 200 aa6.78□□□□□ -1.32
DEPDC4-207ENST00000549249 PLEKHF2Q9H8W4 249 aa6.78□□□□□ -1.32
DEPDC4-207ENST00000549249 UBTD1Q9HAC8 227 aa6.78□□□□□ -1.32
DEPDC4-207ENST00000549249 DECR2Q9NUI1 292 aa6.78□□□□□ -1.32
DEPDC4-207ENST00000549249 NLKQ9UBE8 527 aa6.78□□□□□ -1.32
DEPDC4-207ENST00000549249 RNF7Q9UBF6 113 aa6.78□□□□□ -1.32
DEPDC4-207ENST00000549249 PPP1R3CQ9UQK1 317 aa6.78□□□□□ -1.32
DEPDC4-207ENST00000549249 PLEKHA6Q9Y2H5 1048 aa6.78□□□□□ -1.32
DEPDC4-207ENST00000549249 DOCK11Q5JSL3 2073 aa6.77□□□□□ -1.33
DEPDC4-207ENST00000549249 RFPL4AA6NLU0 287 aa6.77□□□□□ -1.33
DEPDC4-207ENST00000549249 RFPL4AL1F8VTS6 287 aa6.77□□□□□ -1.33
DEPDC4-207ENST00000549249 TMEM178BH3BS89 294 aa6.77□□□□□ -1.33
DEPDC4-207ENST00000549249 SIRPB1O00241 398 aa6.77□□□□□ -1.33
DEPDC4-207ENST00000549249 DEGS1O15121 323 aa6.77□□□□□ -1.33
DEPDC4-207ENST00000549249 LYRM1O43325 122 aa6.77□□□□□ -1.33
DEPDC4-207ENST00000549249 PSPNO60542 156 aa6.77□□□□□ -1.33
DEPDC4-207ENST00000549249 RBBP9O75884 186 aa6.77□□□□□ -1.33
DEPDC4-207ENST00000549249 ZNF205O95201 554 aa6.77□□□□□ -1.33
DEPDC4-207ENST00000549249 FCGR3AP08637 254 aa6.77□□□□□ -1.33
DEPDC4-207ENST00000549249 ZNF44P15621 663 aa6.77□□□□□ -1.33
DEPDC4-207ENST00000549249 NAT1P18440 290 aa6.77□□□□□ -1.33
DEPDC4-207ENST00000549249 LMO1P25800 156 aa6.77□□□□□ -1.33
DEPDC4-207ENST00000549249 RCVRNP35243 200 aa6.77□□□□□ -1.33
DEPDC4-207ENST00000549249 TLE4Q04727 773 aa6.77□□□□□ -1.33
DEPDC4-207ENST00000549249 SSBP1Q04837 148 aaKnown RBP6.77□□□□□ -1.33
DEPDC4-207ENST00000549249 ARFRP1Q13795 201 aa6.77□□□□□ -1.33
DEPDC4-207ENST00000549249 RGS21Q2M5E4 152 aa6.77□□□□□ -1.33
DEPDC4-207ENST00000549249 TEX36Q5VZQ5 186 aa6.77□□□□□ -1.33
DEPDC4-207ENST00000549249 STUMQ69YW2 141 aa6.77□□□□□ -1.33
DEPDC4-207ENST00000549249 FAAP20Q6NZ36 180 aa6.77□□□□□ -1.33
DEPDC4-207ENST00000549249 GLCCI1Q86VQ1 547 aa6.77□□□□□ -1.33
DEPDC4-207ENST00000549249 FAM90A1Q86YD7 464 aa6.77□□□□□ -1.33
DEPDC4-207ENST00000549249 BPIFB2Q8N4F0 458 aa6.77□□□□□ -1.33
DEPDC4-207ENST00000549249 TOMM5Q8N4H5 51 aa6.77□□□□□ -1.33
DEPDC4-207ENST00000549249 OR4S1Q8NGB4 309 aa6.77□□□□□ -1.33
DEPDC4-207ENST00000549249 OR5T2Q8NGG2 359 aa6.77□□□□□ -1.33
DEPDC4-207ENST00000549249 OR11L1Q8NGX0 322 aa6.77□□□□□ -1.33
DEPDC4-207ENST00000549249 PLPPR1Q8TBJ4 325 aa6.77□□□□□ -1.33
DEPDC4-207ENST00000549249 SETD6Q8TBK2 473 aa6.77□□□□□ -1.33
DEPDC4-207ENST00000549249 CHPT1Q8WUD6 406 aa6.77□□□□□ -1.33
DEPDC4-207ENST00000549249 IGFBPL1Q8WX77 278 aa6.77□□□□□ -1.33
DEPDC4-207ENST00000549249 MAFIPQ8WZ33 124 aa6.77□□□□□ -1.33
DEPDC4-207ENST00000549249 SNAPC3Q92966 411 aa6.77□□□□□ -1.33
DEPDC4-207ENST00000549249 VRK1Q99986 396 aaPredicted RBP6.77□□□□□ -1.33
DEPDC4-207ENST00000549249 DPCDQ9BVM2 203 aaPredicted RBP6.77□□□□□ -1.33
DEPDC4-207ENST00000549249 EGLN1Q9GZT9 426 aa6.77□□□□□ -1.33
DEPDC4-207ENST00000549249 PPA2Q9H2U2 334 aa6.77□□□□□ -1.33
DEPDC4-207ENST00000549249 SEBOXQ9HB31 216 aaPredicted RBP6.77□□□□□ -1.33
DEPDC4-207ENST00000549249 HRASLSQ9HDD0 168 aa6.77□□□□□ -1.33
DEPDC4-207ENST00000549249 TMEM106BQ9NUM4 274 aa6.77□□□□□ -1.33
DEPDC4-207ENST00000549249 FAIMQ9NVQ4 179 aa6.77□□□□□ -1.33
DEPDC4-207ENST00000549249 RASL12Q9NYN1 266 aa6.77□□□□□ -1.33
DEPDC4-207ENST00000549249 OR14J1Q9UGF5 321 aa6.77□□□□□ -1.33
DEPDC4-207ENST00000549249 ZNF230Q9UIE0 474 aaPredicted RBP6.77□□□□□ -1.33
DEPDC4-207ENST00000549249 ZNF222Q9UK12 451 aa6.77□□□□□ -1.33
DEPDC4-207ENST00000549249 LAMP3Q9UQV4 416 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms