RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 ZNF343Q6P1L6 599 aa12.19□□□□□ -0.46
RAPGEF3-218ENST00000548919 SPSB3Q6PJ21 355 aa12.19□□□□□ -0.46
RAPGEF3-218ENST00000548919 SLC25A26Q70HW3 274 aa12.19□□□□□ -0.46
RAPGEF3-218ENST00000548919 TBC1D26Q86UD7 250 aa12.19□□□□□ -0.46
RAPGEF3-218ENST00000548919 CCDC71LQ8N9Z2 235 aa12.19□□□□□ -0.46
RAPGEF3-218ENST00000548919 NAT6Q93015 286 aa12.19□□□□□ -0.46
RAPGEF3-218ENST00000548919 UBE2J1Q9Y385 318 aaPredicted RBP12.19□□□□□ -0.46
RAPGEF3-218ENST00000548919 LIPGQ9Y5X9 500 aa12.19□□□□□ -0.46
RAPGEF3-218ENST00000548919 NCKAP5O14513 1909 aa12.19□□□□□ -0.46
RAPGEF3-218ENST00000548919 IGHV1-45A0A0A0MS14 117 aa12.19□□□□□ -0.46
RAPGEF3-218ENST00000548919 TRDCB7Z8K6 153 aa12.19□□□□□ -0.46
RAPGEF3-218ENST00000548919 PROB1E7EW31 1015 aa12.19□□□□□ -0.46
RAPGEF3-218ENST00000548919 H0YL77 283 aa12.19□□□□□ -0.46
RAPGEF3-218ENST00000548919 PPIHO43447 177 aaKnown RBP12.19□□□□□ -0.46
RAPGEF3-218ENST00000548919 UMODP07911 640 aa12.19□□□□□ -0.46
RAPGEF3-218ENST00000548919 EIF2S3P41091 472 aaKnown RBP12.19□□□□□ -0.46
RAPGEF3-218ENST00000548919 RND3P61587 244 aa12.19□□□□□ -0.46
RAPGEF3-218ENST00000548919 TMEM42Q69YG0 159 aa12.19□□□□□ -0.46
RAPGEF3-218ENST00000548919 OR5C1Q8NGR4 320 aa12.19□□□□□ -0.46
RAPGEF3-218ENST00000548919 OR14L1PQ8NHC6 308 aa12.19□□□□□ -0.46
RAPGEF3-218ENST00000548919 MR1Q95460 341 aa12.19□□□□□ -0.46
RAPGEF3-218ENST00000548919 HS3ST6Q96QI5 342 aa12.19□□□□□ -0.46
RAPGEF3-218ENST00000548919 TMEM222Q9H0R3 208 aa12.19□□□□□ -0.46
RAPGEF3-218ENST00000548919 C11orf1Q9H5F2 150 aa12.19□□□□□ -0.46
RAPGEF3-218ENST00000548919 SLC7A11Q9UPY5 501 aa12.19□□□□□ -0.46
RAPGEF3-218ENST00000548919 URGCP-MRPS24S4R325 110 aa12.19□□□□□ -0.46
RAPGEF3-218ENST00000548919 hCG_38984A0A1B0GV85 526 aa12.18□□□□□ -0.46
RAPGEF3-218ENST00000548919 OR6C6A6NF89 314 aa12.18□□□□□ -0.46
RAPGEF3-218ENST00000548919 H3BQ15 152 aa12.18□□□□□ -0.46
RAPGEF3-218ENST00000548919 ADAM20O43506 726 aa12.18□□□□□ -0.46
RAPGEF3-218ENST00000548919 TMEM50AO95807 157 aa12.18□□□□□ -0.46
RAPGEF3-218ENST00000548919 IGHV3-9P01782 118 aa12.18□□□□□ -0.46
RAPGEF3-218ENST00000548919 HEPN1Q6WQI6 88 aa12.18□□□□□ -0.46
RAPGEF3-218ENST00000548919 ZNF695Q8IW36 515 aa12.18□□□□□ -0.46
RAPGEF3-218ENST00000548919 ZNF611Q8N823 705 aa12.18□□□□□ -0.46
RAPGEF3-218ENST00000548919 CCDC54Q8NEL0 328 aa12.18□□□□□ -0.46
RAPGEF3-218ENST00000548919 TCTEX1D2Q8WW35 142 aa12.18□□□□□ -0.46
RAPGEF3-218ENST00000548919 YPEL4Q96NS1 127 aa12.18□□□□□ -0.46
RAPGEF3-218ENST00000548919 PTRH2Q9Y3E5 179 aaKnown RBP12.18□□□□□ -0.46
RAPGEF3-218ENST00000548919 SPINK2P20155 84 aa12.18□□□□□ -0.46
RAPGEF3-218ENST00000548919 FUT3P21217 361 aa12.18□□□□□ -0.46
RAPGEF3-218ENST00000548919 RGS19P49795 217 aa12.18□□□□□ -0.46
RAPGEF3-218ENST00000548919 UCP3P55916 312 aa12.18□□□□□ -0.46
RAPGEF3-218ENST00000548919 RAC1P63000 192 aa12.18□□□□□ -0.46
RAPGEF3-218ENST00000548919 ZNF818PQ6ZRF7 136 aa12.18□□□□□ -0.46
RAPGEF3-218ENST00000548919 ODF3L1Q8IXM7 274 aa12.18□□□□□ -0.46
RAPGEF3-218ENST00000548919 RAB39BQ96DA2 213 aa12.18□□□□□ -0.46
RAPGEF3-218ENST00000548919 MALSU1Q96EH3 234 aa12.18□□□□□ -0.46
RAPGEF3-218ENST00000548919 BCL2L14Q9BZR8 327 aa12.18□□□□□ -0.46
RAPGEF3-218ENST00000548919 WNT5BQ9H1J7 359 aa12.18□□□□□ -0.46
RAPGEF3-218ENST00000548919 OR51M1Q9H341 326 aa12.18□□□□□ -0.46
RAPGEF3-218ENST00000548919 CST2P09228 141 aa12.18□□□□□ -0.46
RAPGEF3-218ENST00000548919 COX6A1P12074 109 aa12.18□□□□□ -0.46
RAPGEF3-218ENST00000548919 SSR4P51571 173 aa12.18□□□□□ -0.46
RAPGEF3-218ENST00000548919 DYNLT3P51808 116 aa12.18□□□□□ -0.46
RAPGEF3-218ENST00000548919 FUT6P51993 359 aa12.18□□□□□ -0.46
RAPGEF3-218ENST00000548919 CEACAM16Q2WEN9 425 aa12.18□□□□□ -0.46
RAPGEF3-218ENST00000548919 SLC23A3Q6PIS1 610 aa12.18□□□□□ -0.46
RAPGEF3-218ENST00000548919 TMEM252Q8N6L7 170 aa12.18□□□□□ -0.46
RAPGEF3-218ENST00000548919 LFNGQ8NES3 379 aa12.18□□□□□ -0.46
RAPGEF3-218ENST00000548919 INTS12Q96CB8 462 aaKnown RBP12.18□□□□□ -0.46
RAPGEF3-218ENST00000548919 IL36RNQ9UBH0 155 aa12.18□□□□□ -0.46
RAPGEF3-218ENST00000548919 TNFSF12O43508 249 aa12.17□□□□□ -0.46
RAPGEF3-218ENST00000548919 SCTP09683 121 aa12.17□□□□□ -0.46
RAPGEF3-218ENST00000548919 EDN3P14138 238 aa12.17□□□□□ -0.46
RAPGEF3-218ENST00000548919 KIAA0141Q14154 515 aaPredicted RBP12.17□□□□□ -0.46
RAPGEF3-218ENST00000548919 ZNF266Q14584 549 aa12.17□□□□□ -0.46
RAPGEF3-218ENST00000548919 P4HA3Q7Z4N8 544 aa12.17□□□□□ -0.46
RAPGEF3-218ENST00000548919 DPPA2Q7Z7J5 298 aa12.17□□□□□ -0.46
RAPGEF3-218ENST00000548919 SELENOHQ8IZQ5 122 aaKnown RBP12.17□□□□□ -0.46
RAPGEF3-218ENST00000548919 GAPTQ8N292 157 aa12.17□□□□□ -0.46
RAPGEF3-218ENST00000548919 MUCL1Q96DR8 90 aa12.17□□□□□ -0.46
RAPGEF3-218ENST00000548919 IMMP1LQ96LU5 166 aa12.17□□□□□ -0.46
RAPGEF3-218ENST00000548919 TCEAL7Q9BRU2 100 aa12.17□□□□□ -0.46
RAPGEF3-218ENST00000548919 PAPOLGQ9BWT3 736 aaKnown RBP12.17□□□□□ -0.46
RAPGEF3-218ENST00000548919 OR2H1Q9GZK4 316 aa12.17□□□□□ -0.46
RAPGEF3-218ENST00000548919 ZMAT5Q9UDW3 170 aaKnown RBP12.17□□□□□ -0.46
RAPGEF3-218ENST00000548919 MUC3AQ02505 3323 aa12.17□□□□□ -0.46
RAPGEF3-218ENST00000548919 IGKV1D-13A0A0B4J2D9 117 aa12.17□□□□□ -0.46
RAPGEF3-218ENST00000548919 PITX3O75364 302 aa12.17□□□□□ -0.46
RAPGEF3-218ENST00000548919 CDS2O95674 445 aa12.17□□□□□ -0.46
RAPGEF3-218ENST00000548919 IFNA17P01571 189 aa12.17□□□□□ -0.46
RAPGEF3-218ENST00000548919 IGKV1-13P0DP09 117 aa12.17□□□□□ -0.46
RAPGEF3-218ENST00000548919 TAGLN2P37802 199 aaKnown RBP12.17□□□□□ -0.46
RAPGEF3-218ENST00000548919 HIKESHIQ53FT3 197 aa12.17□□□□□ -0.46
RAPGEF3-218ENST00000548919 AAED1Q7RTV5 226 aa12.17□□□□□ -0.46
RAPGEF3-218ENST00000548919 CYB561D1Q8N8Q1 229 aa12.17□□□□□ -0.46
RAPGEF3-218ENST00000548919 EXTL1Q92935 676 aa12.17□□□□□ -0.46
RAPGEF3-218ENST00000548919 PHF7Q9BWX1 381 aaPredicted RBP12.17□□□□□ -0.46
RAPGEF3-218ENST00000548919 CRIM1Q9NZV1 1036 aa12.17□□□□□ -0.46
RAPGEF3-218ENST00000548919 IFITM10A6NMD0 228 aa12.16□□□□□ -0.46
RAPGEF3-218ENST00000548919 C3orf80F5H4A9 247 aa12.16□□□□□ -0.46
RAPGEF3-218ENST00000548919 HSD17B6O14756 317 aa12.16□□□□□ -0.46
RAPGEF3-218ENST00000548919 CXCL13O43927 109 aa12.16□□□□□ -0.46
RAPGEF3-218ENST00000548919 CXCL1P09341 107 aa12.16□□□□□ -0.46
RAPGEF3-218ENST00000548919 CARD18P57730 90 aa12.16□□□□□ -0.46
RAPGEF3-218ENST00000548919 RAB1AP62820 205 aa12.16□□□□□ -0.46
RAPGEF3-218ENST00000548919 VAMP2P63027 116 aa12.16□□□□□ -0.46
RAPGEF3-218ENST00000548919 ZNF154Q13106 437 aa12.16□□□□□ -0.46
RAPGEF3-218ENST00000548919 TMEM211Q6ICI0 200 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms