RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 PPP1R35Q8TAP8 253 aa12.85□□□□□ -0.35
DDX54-205ENST00000548786 ZNF184Q99676 751 aaPredicted RBP12.85□□□□□ -0.35
DDX54-205ENST00000548786 TMED9Q9BVK6 235 aa12.85□□□□□ -0.35
DDX54-205ENST00000548786 POMT1Q9Y6A1 747 aa12.85□□□□□ -0.35
DDX54-205ENST00000548786 DSCAML1Q8TD84 2053 aa12.85□□□□□ -0.35
DDX54-205ENST00000548786 FAM172BPA6NC97 362 aa12.84□□□□□ -0.35
DDX54-205ENST00000548786 BTBD17A6NE02 478 aa12.84□□□□□ -0.35
DDX54-205ENST00000548786 ATP6V1G2O95670 118 aa12.84□□□□□ -0.35
DDX54-205ENST00000548786 ARG1P05089 322 aa12.84□□□□□ -0.35
DDX54-205ENST00000548786 IGHV1-8P0DP01 117 aa12.84□□□□□ -0.35
DDX54-205ENST00000548786 IGFBP3P17936 291 aaPredicted RBP12.84□□□□□ -0.35
DDX54-205ENST00000548786 SERPINA2P20848 420 aa12.84□□□□□ -0.35
DDX54-205ENST00000548786 LGALS4P56470 323 aa12.84□□□□□ -0.35
DDX54-205ENST00000548786 MEF2CQ06413 473 aaPredicted RBP12.84□□□□□ -0.35
DDX54-205ENST00000548786 DYNC1I2Q13409 638 aaKnown RBP12.84□□□□□ -0.35
DDX54-205ENST00000548786 MED22Q15528 200 aa12.84□□□□□ -0.35
DDX54-205ENST00000548786 LY6EQ16553 131 aa12.84□□□□□ -0.35
DDX54-205ENST00000548786 MIDNQ504T8 468 aa12.84□□□□□ -0.35
DDX54-205ENST00000548786 PRAMEF5Q5TYX0 476 aa12.84□□□□□ -0.35
DDX54-205ENST00000548786 JAGN1Q8N5M9 183 aa12.84□□□□□ -0.35
DDX54-205ENST00000548786 TMEM86BQ8N661 226 aa12.84□□□□□ -0.35
DDX54-205ENST00000548786 PXT1Q8NFP0 134 aa12.84□□□□□ -0.35
DDX54-205ENST00000548786 S100A13Q99584 98 aa12.84□□□□□ -0.35
DDX54-205ENST00000548786 ANKRD60Q9BZ19 345 aa12.84□□□□□ -0.35
DDX54-205ENST00000548786 CCDC90BQ9GZT6 254 aa12.84□□□□□ -0.35
DDX54-205ENST00000548786 PPIL3Q9H2H8 161 aaKnown RBP12.84□□□□□ -0.35
DDX54-205ENST00000548786 DPAGT1Q9H3H5 408 aa12.84□□□□□ -0.35
DDX54-205ENST00000548786 SEBOXQ9HB31 216 aaPredicted RBP12.84□□□□□ -0.35
DDX54-205ENST00000548786 LINC00312Q9Y6C7 94 aa12.84□□□□□ -0.35
DDX54-205ENST00000548786 TRBV5-7A0A0A0MS05 114 aa12.83□□□□□ -0.36
DDX54-205ENST00000548786 H3BUX3 64 aa12.83□□□□□ -0.36
DDX54-205ENST00000548786 MMP23AO75900 390 aa12.83□□□□□ -0.36
DDX54-205ENST00000548786 ALDOBP05062 364 aa12.83□□□□□ -0.36
DDX54-205ENST00000548786 TGFBR2P37173 567 aa12.83□□□□□ -0.36
DDX54-205ENST00000548786 RAG2P55895 527 aa12.83□□□□□ -0.36
DDX54-205ENST00000548786 SLC35A2P78381 396 aa12.83□□□□□ -0.36
DDX54-205ENST00000548786 RELBQ01201 579 aa12.83□□□□□ -0.36
DDX54-205ENST00000548786 SLC22A6Q4U2R8 563 aa12.83□□□□□ -0.36
DDX54-205ENST00000548786 PAN3Q58A45 887 aaKnown RBP12.83□□□□□ -0.36
DDX54-205ENST00000548786 KRBOX4Q5JUW0 171 aa12.83□□□□□ -0.36
DDX54-205ENST00000548786 BAIAP2L2Q6UXY1 529 aa12.83□□□□□ -0.36
DDX54-205ENST00000548786 MUL1Q969V5 352 aa12.83□□□□□ -0.36
DDX54-205ENST00000548786 COQ2Q96H96 371 aa12.83□□□□□ -0.36
DDX54-205ENST00000548786 AJUBAQ96IF1 538 aa12.83□□□□□ -0.36
DDX54-205ENST00000548786 DERL3Q96Q80 235 aa12.83□□□□□ -0.36
DDX54-205ENST00000548786 CDCA4Q9BXL8 241 aa12.83□□□□□ -0.36
DDX54-205ENST00000548786 METTL9Q9H1A3 318 aa12.83□□□□□ -0.36
DDX54-205ENST00000548786 RHOFQ9HBH0 211 aa12.83□□□□□ -0.36
DDX54-205ENST00000548786 C1RLQ9NZP8 487 aa12.83□□□□□ -0.36
DDX54-205ENST00000548786 LSM2Q9Y333 95 aaKnown RBP12.83□□□□□ -0.36
DDX54-205ENST00000548786 TPRKBQ9Y3C4 175 aa12.83□□□□□ -0.36
DDX54-205ENST00000548786 TRGV10A0A0A0MS01 117 aa12.82□□□□□ -0.36
DDX54-205ENST00000548786 TRAV24A0A0B4J272 114 aa12.82□□□□□ -0.36
DDX54-205ENST00000548786 A0A1W2PP11 408 aa12.82□□□□□ -0.36
DDX54-205ENST00000548786 ODAMA1E959 279 aa12.82□□□□□ -0.36
DDX54-205ENST00000548786 PIN1P1O15428 100 aa12.82□□□□□ -0.36
DDX54-205ENST00000548786 CLPXO76031 633 aa12.82□□□□□ -0.36
DDX54-205ENST00000548786 CSTBP04080 98 aaKnown RBP12.82□□□□□ -0.36
DDX54-205ENST00000548786 HSMCR30P0CW71 290 aa12.82□□□□□ -0.36
DDX54-205ENST00000548786 FSTP19883 344 aa12.82□□□□□ -0.36
DDX54-205ENST00000548786 LMO1P25800 156 aa12.82□□□□□ -0.36
DDX54-205ENST00000548786 MAP2K4P45985 399 aa12.82□□□□□ -0.36
DDX54-205ENST00000548786 SPHARQ15513 63 aa12.82□□□□□ -0.36
DDX54-205ENST00000548786 FAM27D1Q5T7N8 215 aa12.82□□□□□ -0.36
DDX54-205ENST00000548786 ELP2Q6IA86 826 aa12.82□□□□□ -0.36
DDX54-205ENST00000548786 CHST4Q8NCG5 386 aa12.82□□□□□ -0.36
DDX54-205ENST00000548786 BEND2Q8NDZ0 799 aa12.82□□□□□ -0.36
DDX54-205ENST00000548786 OR13D1Q8NGV5 346 aa12.82□□□□□ -0.36
DDX54-205ENST00000548786 DYRK2Q92630 601 aa12.82□□□□□ -0.36
DDX54-205ENST00000548786 VPREB3Q9UKI3 123 aa12.82□□□□□ -0.36
DDX54-205ENST00000548786 NBEAL1Q6ZS30 2694 aa12.81□□□□□ -0.36
DDX54-205ENST00000548786 RGS10O43665 173 aa12.81□□□□□ -0.36
DDX54-205ENST00000548786 ERP29P30040 261 aaKnown RBP12.81□□□□□ -0.36
DDX54-205ENST00000548786 GDNFP39905 211 aa12.81□□□□□ -0.36
DDX54-205ENST00000548786 GLP1RP43220 463 aa12.81□□□□□ -0.36
DDX54-205ENST00000548786 HSPA13P48723 471 aa12.81□□□□□ -0.36
DDX54-205ENST00000548786 LIPKQ5VXJ0 399 aa12.81□□□□□ -0.36
DDX54-205ENST00000548786 DYNAPQ8N1N2 210 aa12.81□□□□□ -0.36
DDX54-205ENST00000548786 OSR2Q8N2R0 312 aa12.81□□□□□ -0.36
DDX54-205ENST00000548786 TMEM203Q969S6 136 aa12.81□□□□□ -0.36
DDX54-205ENST00000548786 SSX3Q99909 188 aa12.81□□□□□ -0.36
DDX54-205ENST00000548786 ST3GAL6Q9Y274 331 aa12.81□□□□□ -0.36
DDX54-205ENST00000548786 MRPS28Q9Y2Q9 187 aaKnown RBP12.81□□□□□ -0.36
DDX54-205ENST00000548786 UBE2J1Q9Y385 318 aaPredicted RBP12.81□□□□□ -0.36
DDX54-205ENST00000548786 SESN1Q9Y6P5 492 aa12.81□□□□□ -0.36
DDX54-205ENST00000548786 KIAA2026Q5HYC2 2103 aa12.8□□□□□ -0.36
DDX54-205ENST00000548786 MEIKINA0A087WXM9 373 aa12.8□□□□□ -0.36
DDX54-205ENST00000548786 IGHV2-26A0A0B4J1V2 119 aa12.8□□□□□ -0.36
DDX54-205ENST00000548786 TRAV39A0A0B4J263 110 aa12.8□□□□□ -0.36
DDX54-205ENST00000548786 FUOMA2VDF0 154 aa12.8□□□□□ -0.36
DDX54-205ENST00000548786 GEMIN2O14893 280 aaKnown RBP12.8□□□□□ -0.36
DDX54-205ENST00000548786 OR7C1O76099 320 aaPredicted RBP12.8□□□□□ -0.36
DDX54-205ENST00000548786 RBP4P02753 201 aa12.8□□□□□ -0.36
DDX54-205ENST00000548786 JUNBP17275 347 aaPredicted RBP12.8□□□□□ -0.36
DDX54-205ENST00000548786 CRHBPP24387 322 aa12.8□□□□□ -0.36
DDX54-205ENST00000548786 CDK2P24941 298 aa12.8□□□□□ -0.36
DDX54-205ENST00000548786 RBM11P57052 281 aaKnown RBP12.8□□□□□ -0.36
DDX54-205ENST00000548786 BDH1Q02338 343 aa12.8□□□□□ -0.36
DDX54-205ENST00000548786 IL13RA2Q14627 380 aa12.8□□□□□ -0.36
DDX54-205ENST00000548786 IRF3Q14653 427 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms