RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 ISG20L2Q9H9L3 353 aaKnown RBP5.4□□□□□ -1.54
SCAF11-211ENST00000547950 SEBOXQ9HB31 216 aaPredicted RBP5.4□□□□□ -1.54
SCAF11-211ENST00000547950 HMG20AQ9NP66 347 aa5.4□□□□□ -1.54
SCAF11-211ENST00000547950 EXOSC4Q9NPD3 245 aaKnown RBP5.4□□□□□ -1.54
SCAF11-211ENST00000547950 PITPNC1Q9UKF7 332 aa5.4□□□□□ -1.54
SCAF11-211ENST00000547950 EXOGQ9Y2C4 368 aaKnown RBP5.4□□□□□ -1.54
SCAF11-211ENST00000547950 MYRFQ9Y2G1 1151 aa5.4□□□□□ -1.54
SCAF11-211ENST00000547950 LINC00312Q9Y6C7 94 aa5.4□□□□□ -1.54
SCAF11-211ENST00000547950 TRGV10A0A0A0MS01 117 aa5.39□□□□□ -1.55
SCAF11-211ENST00000547950 FUOMA2VDF0 154 aa5.39□□□□□ -1.55
SCAF11-211ENST00000547950 E9PI62 339 aa5.39□□□□□ -1.55
SCAF11-211ENST00000547950 G3V4G9 280 aa5.39□□□□□ -1.55
SCAF11-211ENST00000547950 TOR1AO14656 332 aa5.39□□□□□ -1.55
SCAF11-211ENST00000547950 FBXO24O75426 580 aa5.39□□□□□ -1.55
SCAF11-211ENST00000547950 KDM4BO94953 1096 aa5.39□□□□□ -1.55
SCAF11-211ENST00000547950 BAG2O95816 211 aa5.39□□□□□ -1.55
SCAF11-211ENST00000547950 FADS2O95864 444 aaKnown RBP5.39□□□□□ -1.55
SCAF11-211ENST00000547950 PRB2P02812 416 aaPredicted RBP5.39□□□□□ -1.55
SCAF11-211ENST00000547950 MT-ND2P03891 347 aa5.39□□□□□ -1.55
SCAF11-211ENST00000547950 DBTP11182 482 aaKnown RBP5.39□□□□□ -1.55
SCAF11-211ENST00000547950 GABRB1P18505 474 aa5.39□□□□□ -1.55
SCAF11-211ENST00000547950 CDK2P24941 298 aa5.39□□□□□ -1.55
SCAF11-211ENST00000547950 HTR1DP28221 377 aa5.39□□□□□ -1.55
SCAF11-211ENST00000547950 ERP29P30040 261 aaKnown RBP5.39□□□□□ -1.55
SCAF11-211ENST00000547950 SOX2P48431 317 aa5.39□□□□□ -1.55
SCAF11-211ENST00000547950 P2RX3P56373 397 aa5.39□□□□□ -1.55
SCAF11-211ENST00000547950 EMX1Q04741 257 aaPredicted RBP5.39□□□□□ -1.55
SCAF11-211ENST00000547950 GALEQ14376 348 aa5.39□□□□□ -1.55
SCAF11-211ENST00000547950 KISS1Q15726 138 aa5.39□□□□□ -1.55
SCAF11-211ENST00000547950 MINOS1Q5TGZ0 78 aa5.39□□□□□ -1.55
SCAF11-211ENST00000547950 ZFP1Q6P2D0 407 aa5.39□□□□□ -1.55
SCAF11-211ENST00000547950 ZBTB49Q6ZSB9 765 aa5.39□□□□□ -1.55
SCAF11-211ENST00000547950 SATL1Q86VE3 508 aa5.39□□□□□ -1.55
SCAF11-211ENST00000547950 SERPINA12Q8IW75 414 aa5.39□□□□□ -1.55
SCAF11-211ENST00000547950 C10orf67Q8IYJ2 551 aa5.39□□□□□ -1.55
SCAF11-211ENST00000547950 OR5D14Q8NGL3 314 aa5.39□□□□□ -1.55
SCAF11-211ENST00000547950 OR5AK2Q8NH90 309 aa5.39□□□□□ -1.55
SCAF11-211ENST00000547950 RHOXF1Q8NHV9 184 aa5.39□□□□□ -1.55
SCAF11-211ENST00000547950 FBLIM1Q8WUP2 373 aa5.39□□□□□ -1.55
SCAF11-211ENST00000547950 CAPSLQ8WWF8 208 aa5.39□□□□□ -1.55
SCAF11-211ENST00000547950 MRPL48Q96GC5 212 aaKnown RBP5.39□□□□□ -1.55
SCAF11-211ENST00000547950 SLC29A1Q99808 456 aa5.39□□□□□ -1.55
SCAF11-211ENST00000547950 PDCD1LG2Q9BQ51 273 aa5.39□□□□□ -1.55
SCAF11-211ENST00000547950 C9orf16Q9BUW7 83 aa5.39□□□□□ -1.55
SCAF11-211ENST00000547950 GAL3ST2Q9H3Q3 398 aa5.39□□□□□ -1.55
SCAF11-211ENST00000547950 SERTAD4Q9NUC0 356 aa5.39□□□□□ -1.55
SCAF11-211ENST00000547950 DPM3Q9P2X0 92 aa5.39□□□□□ -1.55
SCAF11-211ENST00000547950 UBE2J1Q9Y385 318 aaPredicted RBP5.39□□□□□ -1.55
SCAF11-211ENST00000547950 PCDHGB5Q9Y5G0 923 aa5.39□□□□□ -1.55
SCAF11-211ENST00000547950 MINOS1-NBL1R4GNA1 71 aa5.39□□□□□ -1.55
SCAF11-211ENST00000547950 LOC100130705A0A1B0GUX0 176 aa5.38□□□□□ -1.55
SCAF11-211ENST00000547950 ODAMA1E959 279 aa5.38□□□□□ -1.55
SCAF11-211ENST00000547950 TMEM212A6NML5 194 aa5.38□□□□□ -1.55
SCAF11-211ENST00000547950 LEUTXA8MZ59 168 aa5.38□□□□□ -1.55
SCAF11-211ENST00000547950 E9PQ18 207 aa5.38□□□□□ -1.55
SCAF11-211ENST00000547950 HSPB6O14558 160 aa5.38□□□□□ -1.55
SCAF11-211ENST00000547950 MAGEB3O15480 346 aa5.38□□□□□ -1.55
SCAF11-211ENST00000547950 SULT1B1O43704 296 aa5.38□□□□□ -1.55
SCAF11-211ENST00000547950 MPZL2O60487 215 aa5.38□□□□□ -1.55
SCAF11-211ENST00000547950 ZFPL1O95159 310 aa5.38□□□□□ -1.55
SCAF11-211ENST00000547950 OPN1MWP04001 364 aa5.38□□□□□ -1.55
SCAF11-211ENST00000547950 RPSAP08865 295 aaKnown RBP5.38□□□□□ -1.55
SCAF11-211ENST00000547950 OPN1MW2P0DN77 364 aa5.38□□□□□ -1.55
SCAF11-211ENST00000547950 OPN1MW3P0DN78 364 aa5.38□□□□□ -1.55
SCAF11-211ENST00000547950 NFYBP25208 207 aa5.38□□□□□ -1.55
SCAF11-211ENST00000547950 LMO1P25800 156 aa5.38□□□□□ -1.55
SCAF11-211ENST00000547950 BRS3P32247 399 aa5.38□□□□□ -1.55
SCAF11-211ENST00000547950 GDNFP39905 211 aa5.38□□□□□ -1.55
SCAF11-211ENST00000547950 VDAC2P45880 294 aaPredicted RBP5.38□□□□□ -1.55
SCAF11-211ENST00000547950 DYNLT3P51808 116 aa5.38□□□□□ -1.55
SCAF11-211ENST00000547950 GTF2A1P52655 376 aaPredicted RBP5.38□□□□□ -1.55
SCAF11-211ENST00000547950 GBX2P52951 348 aaPredicted RBP5.38□□□□□ -1.55
SCAF11-211ENST00000547950 PRRX1P54821 245 aa5.38□□□□□ -1.55
SCAF11-211ENST00000547950 IL18R1Q13478 541 aa5.38□□□□□ -1.55
SCAF11-211ENST00000547950 RBM39Q14498 530 aaKnown RBP5.38□□□□□ -1.55
SCAF11-211ENST00000547950 ATXN7L3Q14CW9 347 aaPredicted RBP5.38□□□□□ -1.55
SCAF11-211ENST00000547950 TMEM95Q3KNT9 176 aa5.38□□□□□ -1.55
SCAF11-211ENST00000547950 KRBOX4Q5JUW0 171 aa5.38□□□□□ -1.55
SCAF11-211ENST00000547950 LPCAT4Q643R3 524 aa5.38□□□□□ -1.55
SCAF11-211ENST00000547950 OR52W1Q6IF63 320 aa5.38□□□□□ -1.55
SCAF11-211ENST00000547950 Q6P435 159 aa5.38□□□□□ -1.55
SCAF11-211ENST00000547950 HEPN1Q6WQI6 88 aa5.38□□□□□ -1.55
SCAF11-211ENST00000547950 CENPVQ7Z7K6 275 aaPredicted RBP5.38□□□□□ -1.55
SCAF11-211ENST00000547950 RTN4RL2Q86UN3 420 aa5.38□□□□□ -1.55
SCAF11-211ENST00000547950 SAXO1Q8IYX7 474 aa5.38□□□□□ -1.55
SCAF11-211ENST00000547950 Q8N2B8 174 aa5.38□□□□□ -1.55
SCAF11-211ENST00000547950 SYS1Q8N2H4 156 aa5.38□□□□□ -1.55
SCAF11-211ENST00000547950 ZNF565Q8N9K5 539 aa5.38□□□□□ -1.55
SCAF11-211ENST00000547950 OR5AU1Q8NGC0 362 aa5.38□□□□□ -1.55
SCAF11-211ENST00000547950 OR4D6Q8NGJ1 314 aa5.38□□□□□ -1.55
SCAF11-211ENST00000547950 OR52I1Q8NGK6 324 aa5.38□□□□□ -1.55
SCAF11-211ENST00000547950 TSEN15Q8WW01 171 aaKnown RBP5.38□□□□□ -1.55
SCAF11-211ENST00000547950 CORO2AQ92828 525 aa5.38□□□□□ -1.55
SCAF11-211ENST00000547950 R3HDM4Q96D70 268 aa5.38□□□□□ -1.55
SCAF11-211ENST00000547950 MYCBPQ99417 103 aaPredicted RBP5.38□□□□□ -1.55
SCAF11-211ENST00000547950 GPER1Q99527 375 aa5.38□□□□□ -1.55
SCAF11-211ENST00000547950 CITED2Q99967 270 aaPredicted RBP5.38□□□□□ -1.55
SCAF11-211ENST00000547950 COMMD4Q9H0A8 199 aa5.38□□□□□ -1.55
SCAF11-211ENST00000547950 MMP28Q9H239 520 aa5.38□□□□□ -1.55
SCAF11-211ENST00000547950 S100A14Q9HCY8 104 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 149.8 ms