RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 COX7A1P24310 79 aa12.94□□□□□ -0.34
DDX54-204ENST00000546898 HSPA13P48723 471 aa12.94□□□□□ -0.34
DDX54-204ENST00000546898 RSU1Q15404 277 aa12.94□□□□□ -0.34
DDX54-204ENST00000546898 TAF9Q16594 264 aa12.94□□□□□ -0.34
DDX54-204ENST00000546898 AANATQ16613 207 aa12.94□□□□□ -0.34
DDX54-204ENST00000546898 TPRX1Q8N7U7 411 aa12.94□□□□□ -0.34
DDX54-204ENST00000546898 OR4F5Q8NH21 305 aa12.94□□□□□ -0.34
DDX54-204ENST00000546898 ZNF747Q9BV97 191 aa12.94□□□□□ -0.34
DDX54-204ENST00000546898 MEGF9Q9H1U4 602 aa12.94□□□□□ -0.34
DDX54-204ENST00000546898 PPA2Q9H2U2 334 aa12.94□□□□□ -0.34
DDX54-204ENST00000546898 PAK1IP1Q9NWT1 392 aaPredicted RBP12.94□□□□□ -0.34
DDX54-204ENST00000546898 TPRKBQ9Y3C4 175 aa12.94□□□□□ -0.34
DDX54-204ENST00000546898 TBL2Q9Y4P3 447 aaKnown RBP12.94□□□□□ -0.34
DDX54-204ENST00000546898 TRGV10A0A0A0MS01 117 aa12.93□□□□□ -0.34
DDX54-204ENST00000546898 TRBV5-7A0A0A0MS05 114 aa12.93□□□□□ -0.34
DDX54-204ENST00000546898 A0A0G2JK05 382 aa12.93□□□□□ -0.34
DDX54-204ENST00000546898 PNMA8CA0A1B0GUJ8 204 aa12.93□□□□□ -0.34
DDX54-204ENST00000546898 SLC33A1O00400 549 aaPredicted RBP12.93□□□□□ -0.34
DDX54-204ENST00000546898 DEGS1O15121 323 aa12.93□□□□□ -0.34
DDX54-204ENST00000546898 CLPXO76031 633 aa12.93□□□□□ -0.34
DDX54-204ENST00000546898 MAPK3P27361 379 aaPredicted RBP12.93□□□□□ -0.34
DDX54-204ENST00000546898 PTGFRP43088 359 aa12.93□□□□□ -0.34
DDX54-204ENST00000546898 OR3A4PP47883 348 aa12.93□□□□□ -0.34
DDX54-204ENST00000546898 RAG2P55895 527 aa12.93□□□□□ -0.34
DDX54-204ENST00000546898 LGALS4P56470 323 aa12.93□□□□□ -0.34
DDX54-204ENST00000546898 ZNF626Q68DY1 528 aa12.93□□□□□ -0.34
DDX54-204ENST00000546898 TRAPPC6BQ86SZ2 158 aa12.93□□□□□ -0.34
DDX54-204ENST00000546898 OR11H6Q8NGC7 330 aa12.93□□□□□ -0.34
DDX54-204ENST00000546898 OR14A2Q96R54 314 aa12.93□□□□□ -0.34
DDX54-204ENST00000546898 S100A13Q99584 98 aa12.93□□□□□ -0.34
DDX54-204ENST00000546898 ZNF184Q99676 751 aaPredicted RBP12.93□□□□□ -0.34
DDX54-204ENST00000546898 METTL9Q9H1A3 318 aa12.93□□□□□ -0.34
DDX54-204ENST00000546898 GAL3ST2Q9H3Q3 398 aa12.93□□□□□ -0.34
DDX54-204ENST00000546898 BEX1Q9HBH7 125 aa12.93□□□□□ -0.34
DDX54-204ENST00000546898 C1RLQ9NZP8 487 aa12.93□□□□□ -0.34
DDX54-204ENST00000546898 FOXJ3Q9UPW0 622 aa12.93□□□□□ -0.34
DDX54-204ENST00000546898 SESN1Q9Y6P5 492 aa12.93□□□□□ -0.34
DDX54-204ENST00000546898 ODF3BA8MYP8 253 aa12.92□□□□□ -0.34
DDX54-204ENST00000546898 PTGES3LE9PB15 166 aa12.92□□□□□ -0.34
DDX54-204ENST00000546898 ZNF780AO75290 641 aaPredicted RBP12.92□□□□□ -0.34
DDX54-204ENST00000546898 SLC35A2P78381 396 aa12.92□□□□□ -0.34
DDX54-204ENST00000546898 SCN1BQ07699 218 aa12.92□□□□□ -0.34
DDX54-204ENST00000546898 LRRC75BQ2VPJ9 315 aa12.92□□□□□ -0.34
DDX54-204ENST00000546898 NHLRC3Q5JS37 347 aa12.92□□□□□ -0.34
DDX54-204ENST00000546898 SHISA2Q6UWI4 295 aa12.92□□□□□ -0.34
DDX54-204ENST00000546898 IZUMO2Q6UXV1 221 aa12.92□□□□□ -0.34
DDX54-204ENST00000546898 CDH26Q8IXH8 852 aa12.92□□□□□ -0.34
DDX54-204ENST00000546898 CORO2AQ92828 525 aa12.92□□□□□ -0.34
DDX54-204ENST00000546898 FOXRED1Q96CU9 486 aaPredicted RBP12.92□□□□□ -0.34
DDX54-204ENST00000546898 ORAI1Q96D31 301 aa12.92□□□□□ -0.34
DDX54-204ENST00000546898 AJUBAQ96IF1 538 aa12.92□□□□□ -0.34
DDX54-204ENST00000546898 DERL3Q96Q80 235 aa12.92□□□□□ -0.34
DDX54-204ENST00000546898 PCDHB16Q9NRJ7 776 aa12.92□□□□□ -0.34
DDX54-204ENST00000546898 TAS2R3Q9NYW6 316 aa12.92□□□□□ -0.34
DDX54-204ENST00000546898 TRAV8-7A0A075B6U6 113 aa12.91□□□□□ -0.34
DDX54-204ENST00000546898 ODAMA1E959 279 aa12.91□□□□□ -0.34
DDX54-204ENST00000546898 MEX3AA1L020 520 aaKnown RBP12.91□□□□□ -0.34
DDX54-204ENST00000546898 FAM90A8PA6NJQ4 464 aa12.91□□□□□ -0.34
DDX54-204ENST00000546898 CDRT1O95170 752 aa12.91□□□□□ -0.34
DDX54-204ENST00000546898 HTR3BO95264 441 aa12.91□□□□□ -0.34
DDX54-204ENST00000546898 CSTBP04080 98 aaKnown RBP12.91□□□□□ -0.34
DDX54-204ENST00000546898 MDKP21741 143 aaPredicted RBP12.91□□□□□ -0.34
DDX54-204ENST00000546898 OMGP23515 440 aa12.91□□□□□ -0.34
DDX54-204ENST00000546898 TGFBR2P37173 567 aa12.91□□□□□ -0.34
DDX54-204ENST00000546898 KCNJ3P48549 501 aa12.91□□□□□ -0.34
DDX54-204ENST00000546898 RELBQ01201 579 aa12.91□□□□□ -0.34
DDX54-204ENST00000546898 PAX5Q02548 391 aa12.91□□□□□ -0.34
DDX54-204ENST00000546898 AESQ08117 197 aa12.91□□□□□ -0.34
DDX54-204ENST00000546898 DOC2BQ14184 412 aa12.91□□□□□ -0.34
DDX54-204ENST00000546898 ATXN7L3Q14CW9 347 aaPredicted RBP12.91□□□□□ -0.34
DDX54-204ENST00000546898 SPHARQ15513 63 aa12.91□□□□□ -0.34
DDX54-204ENST00000546898 PAN3Q58A45 887 aaKnown RBP12.91□□□□□ -0.34
DDX54-204ENST00000546898 KRBOX4Q5JUW0 171 aa12.91□□□□□ -0.34
DDX54-204ENST00000546898 OR52W1Q6IF63 320 aa12.91□□□□□ -0.34
DDX54-204ENST00000546898 LINC00596Q86U02 117 aa12.91□□□□□ -0.34
DDX54-204ENST00000546898 MS4A15Q8N5U1 240 aa12.91□□□□□ -0.34
DDX54-204ENST00000546898 OR10K1Q8NGX5 313 aa12.91□□□□□ -0.34
DDX54-204ENST00000546898 C17orf50Q8WW18 174 aa12.91□□□□□ -0.34
DDX54-204ENST00000546898 COQ2Q96H96 371 aa12.91□□□□□ -0.34
DDX54-204ENST00000546898 NR1H4Q96RI1 486 aaPredicted RBP12.91□□□□□ -0.34
DDX54-204ENST00000546898 SLITRK2Q9H156 845 aa12.91□□□□□ -0.34
DDX54-204ENST00000546898 TMEM133Q9H2Q1 129 aa12.91□□□□□ -0.34
DDX54-204ENST00000546898 NCOR1P1Q9H4R4 102 aa12.91□□□□□ -0.34
DDX54-204ENST00000546898 DUSP21Q9H596 190 aa12.91□□□□□ -0.34
DDX54-204ENST00000546898 IFT22Q9H7X7 185 aa12.91□□□□□ -0.34
DDX54-204ENST00000546898 ING4Q9UNL4 249 aa12.91□□□□□ -0.34
DDX54-204ENST00000546898 LSM2Q9Y333 95 aaKnown RBP12.91□□□□□ -0.34
DDX54-204ENST00000546898 MAGEA13PA6NCF6 341 aa12.9□□□□□ -0.34
DDX54-204ENST00000546898 H3BUX3 64 aa12.9□□□□□ -0.34
DDX54-204ENST00000546898 ARG1P05089 322 aa12.9□□□□□ -0.34
DDX54-204ENST00000546898 GLIPR1P48060 266 aa12.9□□□□□ -0.34
DDX54-204ENST00000546898 GPR176Q14439 515 aa12.9□□□□□ -0.34
DDX54-204ENST00000546898 IRF3Q14653 427 aa12.9□□□□□ -0.34
DDX54-204ENST00000546898 DHRS7BQ6IAN0 325 aaPredicted RBP12.9□□□□□ -0.34
DDX54-204ENST00000546898 HEPN1Q6WQI6 88 aa12.9□□□□□ -0.34
DDX54-204ENST00000546898 OSR2Q8N2R0 312 aa12.9□□□□□ -0.34
DDX54-204ENST00000546898 NKAIN3Q8N8D7 197 aa12.9□□□□□ -0.34
DDX54-204ENST00000546898 TAF15Q92804 592 aaKnown RBP eCLIP12.9□□□□□ -0.34
DDX54-204ENST00000546898 NKX3-1Q99801 234 aaPredicted RBP12.9□□□□□ -0.34
DDX54-204ENST00000546898 SSX3Q99909 188 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms