RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 ANKRD10Q9NXR5 420 aa11.33□□□□□ -0.6
PTCH1-212ENST00000546744 FAM221AA4D161 298 aa11.32□□□□□ -0.6
PTCH1-212ENST00000546744 GYPAP02724 150 aa11.32□□□□□ -0.6
PTCH1-212ENST00000546744 HIST1H1BP16401 226 aaKnown RBP11.32□□□□□ -0.6
PTCH1-212ENST00000546744 HTR1DP28221 377 aa11.32□□□□□ -0.6
PTCH1-212ENST00000546744 MLF1P58340 268 aa11.32□□□□□ -0.6
PTCH1-212ENST00000546744 SMIM21Q3B7S5 101 aa11.32□□□□□ -0.6
PTCH1-212ENST00000546744 WDFY1Q8IWB7 410 aa11.32□□□□□ -0.6
PTCH1-212ENST00000546744 OR5R1Q8NH85 324 aa11.32□□□□□ -0.6
PTCH1-212ENST00000546744 GPX7Q96SL4 187 aaPredicted RBP11.32□□□□□ -0.6
PTCH1-212ENST00000546744 PISDQ9UG56 409 aa11.32□□□□□ -0.6
PTCH1-212ENST00000546744 TMEM250H0YL14 139 aa11.32□□□□□ -0.6
PTCH1-212ENST00000546744 BTF3P20290 206 aaKnown RBP11.32□□□□□ -0.6
PTCH1-212ENST00000546744 MEF2BQ02080 365 aaPredicted RBP11.32□□□□□ -0.6
PTCH1-212ENST00000546744 DEFB133Q30KQ1 61 aa11.32□□□□□ -0.6
PTCH1-212ENST00000546744 DNLZQ5SXM8 178 aa11.32□□□□□ -0.6
PTCH1-212ENST00000546744 RPS19BP1Q86WX3 136 aaKnown RBP11.32□□□□□ -0.6
PTCH1-212ENST00000546744 TGIF2LYQ8IUE0 185 aa11.32□□□□□ -0.6
PTCH1-212ENST00000546744 CARFQ8N187 725 aa11.32□□□□□ -0.6
PTCH1-212ENST00000546744 ADTRPQ96IZ2 230 aa11.32□□□□□ -0.6
PTCH1-212ENST00000546744 PGLYRP3Q96LB9 341 aa11.32□□□□□ -0.6
PTCH1-212ENST00000546744 TMEM56Q96MV1 263 aa11.32□□□□□ -0.6
PTCH1-212ENST00000546744 GINS3Q9BRX5 216 aa11.32□□□□□ -0.6
PTCH1-212ENST00000546744 TRAV8-7A0A075B6U6 113 aa11.32□□□□□ -0.6
PTCH1-212ENST00000546744 CHST1O43916 411 aa11.32□□□□□ -0.6
PTCH1-212ENST00000546744 H2BFSP57053 126 aa11.32□□□□□ -0.6
PTCH1-212ENST00000546744 TMEM267Q0VDI3 215 aaPredicted RBP11.32□□□□□ -0.6
PTCH1-212ENST00000546744 PRAMEF20Q5VT98 475 aa11.32□□□□□ -0.6
PTCH1-212ENST00000546744 SLC25A38Q96DW6 304 aa11.32□□□□□ -0.6
PTCH1-212ENST00000546744 RBM14Q96PK6 669 aaKnown RBP11.32□□□□□ -0.6
PTCH1-212ENST00000546744 LOC390937A0A1W2PQ73 354 aa11.32□□□□□ -0.6
PTCH1-212ENST00000546744 GAGE10A6NGK3 116 aa11.32□□□□□ -0.6
PTCH1-212ENST00000546744 SNURFLB1AK76 121 aa11.32□□□□□ -0.6
PTCH1-212ENST00000546744 LINC00587B1AMM8 73 aa11.32□□□□□ -0.6
PTCH1-212ENST00000546744 IDSB3KWA1 339 aa11.32□□□□□ -0.6
PTCH1-212ENST00000546744 BMPR1BO00238 502 aa11.32□□□□□ -0.6
PTCH1-212ENST00000546744 UBE2CO00762 179 aa11.32□□□□□ -0.6
PTCH1-212ENST00000546744 PPYP01298 95 aa11.32□□□□□ -0.6
PTCH1-212ENST00000546744 ANKRD55Q3KP44 614 aa11.32□□□□□ -0.6
PTCH1-212ENST00000546744 OR10G3Q8NGC4 313 aa11.32□□□□□ -0.6
PTCH1-212ENST00000546744 SLC7A10Q9NS82 523 aa11.32□□□□□ -0.6
PTCH1-212ENST00000546744 SNCGO76070 127 aa11.31□□□□□ -0.6
PTCH1-212ENST00000546744 CXorf1O96002 111 aa11.31□□□□□ -0.6
PTCH1-212ENST00000546744 CXCL10P02778 98 aa11.31□□□□□ -0.6
PTCH1-212ENST00000546744 VSIG8P0DPA2 414 aa11.31□□□□□ -0.6
PTCH1-212ENST00000546744 AGFG1P52594 562 aaKnown RBP11.31□□□□□ -0.6
PTCH1-212ENST00000546744 EDDM3BP56851 147 aa11.31□□□□□ -0.6
PTCH1-212ENST00000546744 OR1L6Q8NGR2 347 aa11.31□□□□□ -0.6
PTCH1-212ENST00000546744 SAP30LQ9HAJ7 183 aa11.31□□□□□ -0.6
PTCH1-212ENST00000546744 LILRA5A6NI73 299 aa11.31□□□□□ -0.6
PTCH1-212ENST00000546744 F12P00748 615 aaPredicted RBP11.31□□□□□ -0.6
PTCH1-212ENST00000546744 HIST1H1EP10412 219 aaKnown RBP11.31□□□□□ -0.6
PTCH1-212ENST00000546744 RAB7AP51149 207 aa11.31□□□□□ -0.6
PTCH1-212ENST00000546744 Q5BKY6 102 aa11.31□□□□□ -0.6
PTCH1-212ENST00000546744 C16orf82Q7Z2V1 217 aa11.31□□□□□ -0.6
PTCH1-212ENST00000546744 C6orf201Q7Z4U5 140 aa11.31□□□□□ -0.6
PTCH1-212ENST00000546744 TGIF2LXQ8IUE1 241 aa11.31□□□□□ -0.6
PTCH1-212ENST00000546744 RNF133Q8WVZ7 376 aa11.31□□□□□ -0.6
PTCH1-212ENST00000546744 CISD1Q9NZ45 108 aaKnown RBP11.31□□□□□ -0.6
PTCH1-212ENST00000546744 TAAR3PQ9P1P4 343 aa11.31□□□□□ -0.6
PTCH1-212ENST00000546744 VENTXO95231 258 aa11.31□□□□□ -0.6
PTCH1-212ENST00000546744 HBZP02008 142 aa11.31□□□□□ -0.6
PTCH1-212ENST00000546744 MYOGP15173 224 aa11.31□□□□□ -0.6
PTCH1-212ENST00000546744 ACAA2P42765 397 aaKnown RBP11.31□□□□□ -0.6
PTCH1-212ENST00000546744 CASP6P55212 293 aa11.31□□□□□ -0.6
PTCH1-212ENST00000546744 FAM78AQ5JUQ0 283 aa11.31□□□□□ -0.6
PTCH1-212ENST00000546744 SHISA6Q6ZSJ9 500 aa11.31□□□□□ -0.6
PTCH1-212ENST00000546744 ATG4DQ86TL0 474 aaPredicted RBP11.31□□□□□ -0.6
PTCH1-212ENST00000546744 LINC00596Q86U02 117 aa11.31□□□□□ -0.6
PTCH1-212ENST00000546744 NRSN2Q9GZP1 204 aa11.31□□□□□ -0.6
PTCH1-212ENST00000546744 DHCR7Q9UBM7 475 aaKnown RBP11.31□□□□□ -0.6
PTCH1-212ENST00000546744 WASHC3Q9Y3C0 194 aa11.31□□□□□ -0.6
PTCH1-212ENST00000546744 CTLA4P16410 223 aa11.3□□□□□ -0.6
PTCH1-212ENST00000546744 BCL3P20749 454 aa11.3□□□□□ -0.6
PTCH1-212ENST00000546744 CAPZBP47756 277 aa11.3□□□□□ -0.6
PTCH1-212ENST00000546744 ADPRHP54922 357 aa11.3□□□□□ -0.6
PTCH1-212ENST00000546744 LTC4SQ16873 150 aa11.3□□□□□ -0.6
PTCH1-212ENST00000546744 SAPCD1Q5SSQ6 148 aa11.3□□□□□ -0.6
PTCH1-212ENST00000546744 OR4C3Q8NH37 302 aa11.3□□□□□ -0.6
PTCH1-212ENST00000546744 SGMS2Q8NHU3 365 aa11.3□□□□□ -0.6
PTCH1-212ENST00000546744 ERRFI1Q9UJM3 462 aaPredicted RBP11.3□□□□□ -0.6
PTCH1-212ENST00000546744 CCL26Q9Y258 94 aa11.3□□□□□ -0.6
PTCH1-212ENST00000546744 MYO7AQ13402 2215 aa11.3□□□□□ -0.6
PTCH1-212ENST00000546744 A0A1W2PPC1 479 aa11.3□□□□□ -0.6
PTCH1-212ENST00000546744 PLPP3O14495 311 aa11.3□□□□□ -0.6
PTCH1-212ENST00000546744 CEACAM5P06731 702 aa11.3□□□□□ -0.6
PTCH1-212ENST00000546744 LPAR6P43657 344 aa11.3□□□□□ -0.6
PTCH1-212ENST00000546744 OR3A4PP47883 348 aa11.3□□□□□ -0.6
PTCH1-212ENST00000546744 ROM1Q03395 351 aa11.3□□□□□ -0.6
PTCH1-212ENST00000546744 HIKESHIQ53FT3 197 aa11.3□□□□□ -0.6
PTCH1-212ENST00000546744 LYSMD4Q5XG99 296 aa11.3□□□□□ -0.6
PTCH1-212ENST00000546744 TMEM215Q68D42 235 aa11.3□□□□□ -0.6
PTCH1-212ENST00000546744 OR6X1Q8NH79 312 aa11.3□□□□□ -0.6
PTCH1-212ENST00000546744 TRBV5-7A0A0A0MS05 114 aa11.3□□□□□ -0.6
PTCH1-212ENST00000546744 HOXC4P09017 264 aaPredicted RBP11.3□□□□□ -0.6
PTCH1-212ENST00000546744 CCR5P51681 352 aa11.3□□□□□ -0.6
PTCH1-212ENST00000546744 RIGQ13278 110 aa11.3□□□□□ -0.6
PTCH1-212ENST00000546744 DHRS13Q6UX07 377 aa11.3□□□□□ -0.6
PTCH1-212ENST00000546744 ERASQ7Z444 233 aa11.3□□□□□ -0.6
PTCH1-212ENST00000546744 TBC1D26Q86UD7 250 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms