RNA–Protein interactions for RNA: ENST00000545882.5

CNN3-207, Transcript of calponin 3, humanhuman

TSL 2 BASIC

Gene CNN3, Length 1,902 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-207ENST00000545882 DMDP11532 3685 aa13.15□□□□□ -0.3
CNN3-207ENST00000545882 A0A1W2PPE3 182 aa13.15□□□□□ -0.3
CNN3-207ENST00000545882 C5orf52A6NGY3 159 aa13.15□□□□□ -0.3
CNN3-207ENST00000545882 AGAP20933 346 aa13.15□□□□□ -0.3
CNN3-207ENST00000545882 FOLR3P41439 243 aa13.15□□□□□ -0.3
CNN3-207ENST00000545882 RAB5CP51148 216 aa13.15□□□□□ -0.3
CNN3-207ENST00000545882 RIPPLY2Q5TAB7 128 aa13.15□□□□□ -0.3
CNN3-207ENST00000545882 SLC23A3Q6PIS1 610 aa13.15□□□□□ -0.3
CNN3-207ENST00000545882 TMEM182Q6ZP80 229 aaPredicted RBP13.15□□□□□ -0.3
CNN3-207ENST00000545882 SLC25A26Q70HW3 274 aa13.15□□□□□ -0.3
CNN3-207ENST00000545882 ISOC2Q96AB3 205 aa13.15□□□□□ -0.3
CNN3-207ENST00000545882 ZNF845Q96IR2 970 aaPredicted RBP13.15□□□□□ -0.3
CNN3-207ENST00000545882 HS3ST6Q96QI5 342 aa13.15□□□□□ -0.3
CNN3-207ENST00000545882 C1QTNF5Q9BXJ0 243 aa13.15□□□□□ -0.3
CNN3-207ENST00000545882 TMEM222Q9H0R3 208 aa13.15□□□□□ -0.3
CNN3-207ENST00000545882 A0A1W2PPH5 198 aa13.14□□□□□ -0.31
CNN3-207ENST00000545882 IGSF23A1L1A6 192 aa13.14□□□□□ -0.31
CNN3-207ENST00000545882 PINLYPA6NC86 204 aa13.14□□□□□ -0.31
CNN3-207ENST00000545882 RPL36A-HNRNPH2H7BZ11 118 aa13.14□□□□□ -0.31
CNN3-207ENST00000545882 ZNHIT1O43257 154 aa13.14□□□□□ -0.31
CNN3-207ENST00000545882 OR7C1O76099 320 aaPredicted RBP13.14□□□□□ -0.31
CNN3-207ENST00000545882 PRH1P02810 166 aa13.14□□□□□ -0.31
CNN3-207ENST00000545882 MT-ND4LP03901 98 aa13.14□□□□□ -0.31
CNN3-207ENST00000545882 P04436 131 aa13.14□□□□□ -0.31
CNN3-207ENST00000545882 B2MP61769 119 aa13.14□□□□□ -0.31
CNN3-207ENST00000545882 RPS18P62269 152 aaKnown RBP13.14□□□□□ -0.31
CNN3-207ENST00000545882 PPP1R32Q7Z5V6 425 aa13.14□□□□□ -0.31
CNN3-207ENST00000545882 ODF3L1Q8IXM7 274 aa13.14□□□□□ -0.31
CNN3-207ENST00000545882 SLC7A10Q9NS82 523 aa13.14□□□□□ -0.31
CNN3-207ENST00000545882 FBXO7Q9Y3I1 522 aa13.14□□□□□ -0.31
CNN3-207ENST00000545882 A6NLC8 198 aa13.13□□□□□ -0.31
CNN3-207ENST00000545882 C1orf196B1AJZ1 125 aa13.13□□□□□ -0.31
CNN3-207ENST00000545882 BCL3P20749 454 aa13.13□□□□□ -0.31
CNN3-207ENST00000545882 PCBD1P61457 104 aa13.13□□□□□ -0.31
CNN3-207ENST00000545882 Q6ZS49 121 aa13.13□□□□□ -0.31
CNN3-207ENST00000545882 COLCA1Q6ZS62 124 aa13.13□□□□□ -0.31
CNN3-207ENST00000545882 SELENOHQ8IZQ5 122 aaKnown RBP13.13□□□□□ -0.31
CNN3-207ENST00000545882 OR2C3Q8N628 320 aa13.13□□□□□ -0.31
CNN3-207ENST00000545882 ABHD3Q8WU67 409 aa13.13□□□□□ -0.31
CNN3-207ENST00000545882 EXTL1Q92935 676 aa13.13□□□□□ -0.31
CNN3-207ENST00000545882 TMEM56Q96MV1 263 aa13.13□□□□□ -0.31
CNN3-207ENST00000545882 TAAR9Q96RI9 348 aa13.13□□□□□ -0.31
CNN3-207ENST00000545882 ABHD14AQ9BUJ0 271 aa13.13□□□□□ -0.31
CNN3-207ENST00000545882 IFT22Q9H7X7 185 aa13.13□□□□□ -0.31
CNN3-207ENST00000545882 TMEM56-RWDD3S4R434 201 aa13.13□□□□□ -0.31
CNN3-207ENST00000545882 VPS13AQ96RL7 3174 aa13.13□□□□□ -0.31
CNN3-207ENST00000545882 A0A1B0GW64 132 aa13.13□□□□□ -0.31
CNN3-207ENST00000545882 ZNF724A8MTY0 619 aa13.13□□□□□ -0.31
CNN3-207ENST00000545882 UMAD1C9J7I0 102 aa13.13□□□□□ -0.31
CNN3-207ENST00000545882 CYTIPO60759 359 aa13.13□□□□□ -0.31
CNN3-207ENST00000545882 CDS2O95674 445 aa13.13□□□□□ -0.31
CNN3-207ENST00000545882 POLR2GP62487 172 aaKnown RBP eCLIP13.13□□□□□ -0.31
CNN3-207ENST00000545882 GNMTQ14749 295 aa13.13□□□□□ -0.31
CNN3-207ENST00000545882 DPPA2Q7Z7J5 298 aa13.13□□□□□ -0.31
CNN3-207ENST00000545882 TBC1D26Q86UD7 250 aa13.13□□□□□ -0.31
CNN3-207ENST00000545882 SUMF1Q8NBK3 374 aa13.13□□□□□ -0.31
CNN3-207ENST00000545882 LILRB1Q8NHL6 650 aaPredicted RBP13.13□□□□□ -0.31
CNN3-207ENST00000545882 FAM213BQ8TBF2 198 aa13.13□□□□□ -0.31
CNN3-207ENST00000545882 TECTBQ96PL2 329 aa13.13□□□□□ -0.31
CNN3-207ENST00000545882 GPHA2Q96T91 129 aa13.13□□□□□ -0.31
CNN3-207ENST00000545882 PRDM14Q9GZV8 571 aa13.13□□□□□ -0.31
CNN3-207ENST00000545882 Q9N2K0 584 aa13.13□□□□□ -0.31
CNN3-207ENST00000545882 A0A1B0GV50 99 aa13.12□□□□□ -0.31
CNN3-207ENST00000545882 M0R036 132 aa13.12□□□□□ -0.31
CNN3-207ENST00000545882 UBE2CO00762 179 aa13.12□□□□□ -0.31
CNN3-207ENST00000545882 TRAPPC6AO75865 159 aa13.12□□□□□ -0.31
CNN3-207ENST00000545882 CER1O95813 267 aa13.12□□□□□ -0.31
CNN3-207ENST00000545882 NAPSAO96009 420 aa13.12□□□□□ -0.31
CNN3-207ENST00000545882 IGHV3-9P01782 118 aa13.12□□□□□ -0.31
CNN3-207ENST00000545882 CCL20P78556 96 aa13.12□□□□□ -0.31
CNN3-207ENST00000545882 HERPUD1Q15011 391 aa13.12□□□□□ -0.31
CNN3-207ENST00000545882 SP5Q6BEB4 398 aaPredicted RBP13.12□□□□□ -0.31
CNN3-207ENST00000545882 RBMS3Q6XE24 437 aaKnown RBP13.12□□□□□ -0.31
CNN3-207ENST00000545882 ZNF818PQ6ZRF7 136 aa13.12□□□□□ -0.31
CNN3-207ENST00000545882 TMEM171Q8WVE6 324 aa13.12□□□□□ -0.31
CNN3-207ENST00000545882 RARRES2Q99969 163 aa13.12□□□□□ -0.31
CNN3-207ENST00000545882 SLC35B3Q9H1N7 401 aa13.12□□□□□ -0.31
CNN3-207ENST00000545882 PARPBPQ9NWS1 579 aa13.12□□□□□ -0.31
CNN3-207ENST00000545882 IGKV1D-13A0A0B4J2D9 117 aa13.11□□□□□ -0.31
CNN3-207ENST00000545882 PROB1E7EW31 1015 aa13.11□□□□□ -0.31
CNN3-207ENST00000545882 SCTP09683 121 aa13.11□□□□□ -0.31
CNN3-207ENST00000545882 IGKV1-13P0DP09 117 aa13.11□□□□□ -0.31
CNN3-207ENST00000545882 HOXB1P14653 301 aaPredicted RBP13.11□□□□□ -0.31
CNN3-207ENST00000545882 ATP6V0CP27449 155 aa13.11□□□□□ -0.31
CNN3-207ENST00000545882 NKX2-1P43699 371 aaPredicted RBP13.11□□□□□ -0.31
CNN3-207ENST00000545882 DUSP3P51452 185 aaPredicted RBP13.11□□□□□ -0.31
CNN3-207ENST00000545882 RND3P61587 244 aa13.11□□□□□ -0.31
CNN3-207ENST00000545882 CLINT1Q14677 625 aa13.11□□□□□ -0.31
CNN3-207ENST00000545882 EIF2S3LQ2VIR3 472 aaKnown RBP13.11□□□□□ -0.31
CNN3-207ENST00000545882 CXorf66Q5JRM2 361 aaPredicted RBP13.11□□□□□ -0.31
CNN3-207ENST00000545882 SPSB3Q6PJ21 355 aa13.11□□□□□ -0.31
CNN3-207ENST00000545882 FAM185AQ8N0U4 392 aa13.11□□□□□ -0.31
CNN3-207ENST00000545882 ZNF561Q8N587 486 aa13.11□□□□□ -0.31
CNN3-207ENST00000545882 SLAMF9Q96A28 289 aa13.11□□□□□ -0.31
CNN3-207ENST00000545882 POM121Q96HA1 1249 aa13.11□□□□□ -0.31
CNN3-207ENST00000545882 IL36RNQ9UBH0 155 aa13.11□□□□□ -0.31
CNN3-207ENST00000545882 hCG_1809904A0A1W2PP81 198 aa13.11□□□□□ -0.31
CNN3-207ENST00000545882 A0A1W2PR64 198 aa13.11□□□□□ -0.31
CNN3-207ENST00000545882 A0A1W2PRV1 198 aa13.11□□□□□ -0.31
CNN3-207ENST00000545882 FAM90A10PA6NDY2 464 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 152.2 ms