RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 ZNF671Q8TAW3 534 aa11.93□□□□□ -0.5
CLSTN3-216ENST00000545663 C4orf3Q8WVX3 66 aa11.93□□□□□ -0.5
CLSTN3-216ENST00000545663 MRPL48Q96GC5 212 aaKnown RBP11.93□□□□□ -0.5
CLSTN3-216ENST00000545663 ZNF184Q99676 751 aaPredicted RBP11.93□□□□□ -0.5
CLSTN3-216ENST00000545663 MED20Q9H944 212 aa11.93□□□□□ -0.5
CLSTN3-216ENST00000545663 BRD7Q9NPI1 651 aa11.93□□□□□ -0.5
CLSTN3-216ENST00000545663 RASL12Q9NYN1 266 aa11.93□□□□□ -0.5
CLSTN3-216ENST00000545663 DNAJC27Q9NZQ0 273 aa11.93□□□□□ -0.5
CLSTN3-216ENST00000545663 RPL36Q9Y3U8 105 aaKnown RBP11.93□□□□□ -0.5
CLSTN3-216ENST00000545663 A8MZ25 164 aa11.92□□□□□ -0.5
CLSTN3-216ENST00000545663 K7N7A8 449 aa11.92□□□□□ -0.5
CLSTN3-216ENST00000545663 ZNF593O00488 134 aaPredicted RBP11.92□□□□□ -0.5
CLSTN3-216ENST00000545663 IGHG2P01859 326 aa11.92□□□□□ -0.5
CLSTN3-216ENST00000545663 SPARCP09486 303 aa11.92□□□□□ -0.5
CLSTN3-216ENST00000545663 CLUP10909 449 aa11.92□□□□□ -0.5
CLSTN3-216ENST00000545663 AQP4P55087 323 aa11.92□□□□□ -0.5
CLSTN3-216ENST00000545663 GPR50Q13585 617 aa11.92□□□□□ -0.5
CLSTN3-216ENST00000545663 HNF4GQ14541 408 aa11.92□□□□□ -0.5
CLSTN3-216ENST00000545663 SMIM21Q3B7S5 101 aa11.92□□□□□ -0.5
CLSTN3-216ENST00000545663 CEP78Q5JTW2 689 aa11.92□□□□□ -0.5
CLSTN3-216ENST00000545663 HAPLN4Q86UW8 402 aa11.92□□□□□ -0.5
CLSTN3-216ENST00000545663 ERI1Q8IV48 349 aaKnown RBP11.92□□□□□ -0.5
CLSTN3-216ENST00000545663 ZDHHC23Q8IYP9 409 aa11.92□□□□□ -0.5
CLSTN3-216ENST00000545663 ENTHD1Q8IYW4 607 aa11.92□□□□□ -0.5
CLSTN3-216ENST00000545663 ABHD12Q8N2K0 398 aa11.92□□□□□ -0.5
CLSTN3-216ENST00000545663 TPRX1Q8N7U7 411 aa11.92□□□□□ -0.5
CLSTN3-216ENST00000545663 ZNF511Q8NB15 262 aa11.92□□□□□ -0.5
CLSTN3-216ENST00000545663 OR1N2Q8NGR9 330 aa11.92□□□□□ -0.5
CLSTN3-216ENST00000545663 OR6N2Q8NGY6 317 aa11.92□□□□□ -0.5
CLSTN3-216ENST00000545663 ASB17Q8WXJ9 295 aa11.92□□□□□ -0.5
CLSTN3-216ENST00000545663 TNCP24821 2201 aa11.91□□□□□ -0.5
CLSTN3-216ENST00000545663 LEUTXA8MZ59 168 aa11.91□□□□□ -0.5
CLSTN3-216ENST00000545663 FADS2O95864 444 aaKnown RBP11.91□□□□□ -0.5
CLSTN3-216ENST00000545663 FAM106CPP0CH98 169 aa11.91□□□□□ -0.5
CLSTN3-216ENST00000545663 GABRB1P18505 474 aa11.91□□□□□ -0.5
CLSTN3-216ENST00000545663 ZNF121P58317 390 aaPredicted RBP11.91□□□□□ -0.5
CLSTN3-216ENST00000545663 ISL1P61371 349 aa11.91□□□□□ -0.5
CLSTN3-216ENST00000545663 BDH1Q02338 343 aa11.91□□□□□ -0.5
CLSTN3-216ENST00000545663 FOXE3Q13461 319 aa11.91□□□□□ -0.5
CLSTN3-216ENST00000545663 MED21Q13503 144 aa11.91□□□□□ -0.5
CLSTN3-216ENST00000545663 TPTE2P1Q5T6R2 138 aa11.91□□□□□ -0.5
CLSTN3-216ENST00000545663 DEGS2Q6QHC5 323 aa11.91□□□□□ -0.5
CLSTN3-216ENST00000545663 FOXRED2Q8IWF2 684 aa11.91□□□□□ -0.5
CLSTN3-216ENST00000545663 FTMTQ8N4E7 242 aa11.91□□□□□ -0.5
CLSTN3-216ENST00000545663 FAM71E2Q8N5Q1 922 aa11.91□□□□□ -0.5
CLSTN3-216ENST00000545663 RNF152Q8N8N0 203 aa11.91□□□□□ -0.5
CLSTN3-216ENST00000545663 ASCC1Q8N9N2 400 aaKnown RBP11.91□□□□□ -0.5
CLSTN3-216ENST00000545663 POC1AQ8NBT0 407 aa11.91□□□□□ -0.5
CLSTN3-216ENST00000545663 OTOSQ8NHW6 89 aa11.91□□□□□ -0.5
CLSTN3-216ENST00000545663 HIST1H2AAQ96QV6 131 aa11.91□□□□□ -0.5
CLSTN3-216ENST00000545663 OR5B12Q96R08 314 aa11.91□□□□□ -0.5
CLSTN3-216ENST00000545663 ANKRD60Q9BZ19 345 aa11.91□□□□□ -0.5
CLSTN3-216ENST00000545663 NIPAL2Q9H841 368 aa11.91□□□□□ -0.5
CLSTN3-216ENST00000545663 LAMP5Q9UJQ1 280 aa11.91□□□□□ -0.5
CLSTN3-216ENST00000545663 CCDC182A6NF36 153 aa11.9□□□□□ -0.5
CLSTN3-216ENST00000545663 ZNF878C9JN71 531 aa11.9□□□□□ -0.5
CLSTN3-216ENST00000545663 LY6LH3BQJ8 138 aa11.9□□□□□ -0.5
CLSTN3-216ENST00000545663 OVOL1O14753 267 aa11.9□□□□□ -0.5
CLSTN3-216ENST00000545663 ENTPD6O75354 484 aa11.9□□□□□ -0.5
CLSTN3-216ENST00000545663 ZNF254O75437 659 aa11.9□□□□□ -0.5
CLSTN3-216ENST00000545663 LYNP07948 512 aa11.9□□□□□ -0.5
CLSTN3-216ENST00000545663 OR8U8P0C7N1 319 aa11.9□□□□□ -0.5
CLSTN3-216ENST00000545663 OR2T7P0C7T2 308 aa11.9□□□□□ -0.5
CLSTN3-216ENST00000545663 ARHGDIBP52566 201 aa11.9□□□□□ -0.5
CLSTN3-216ENST00000545663 CXCR4P61073 352 aa11.9□□□□□ -0.5
CLSTN3-216ENST00000545663 GRB2P62993 217 aaKnown RBP11.9□□□□□ -0.5
CLSTN3-216ENST00000545663 GNG3P63215 75 aa11.9□□□□□ -0.5
CLSTN3-216ENST00000545663 RAB40BQ12829 278 aa11.9□□□□□ -0.5
CLSTN3-216ENST00000545663 EDDM3AQ14507 147 aa11.9□□□□□ -0.5
CLSTN3-216ENST00000545663 UTF1Q5T230 341 aa11.9□□□□□ -0.5
CLSTN3-216ENST00000545663 BBS1Q8NFJ9 593 aa11.9□□□□□ -0.5
CLSTN3-216ENST00000545663 ST6GALNAC5Q9BVH7 336 aa11.9□□□□□ -0.5
CLSTN3-216ENST00000545663 GNB4Q9HAV0 340 aa11.9□□□□□ -0.5
CLSTN3-216ENST00000545663 MRPS18AQ9NVS2 196 aaKnown RBP11.9□□□□□ -0.5
CLSTN3-216ENST00000545663 MAGEA13PA6NCF6 341 aa11.89□□□□□ -0.51
CLSTN3-216ENST00000545663 FAM90A18PA6NE21 464 aa11.89□□□□□ -0.51
CLSTN3-216ENST00000545663 FAM90A16PA6NEW6 464 aa11.89□□□□□ -0.51
CLSTN3-216ENST00000545663 FAM90A20PA6NIJ5 464 aa11.89□□□□□ -0.51
CLSTN3-216ENST00000545663 FAM90A9PA6NNJ1 464 aa11.89□□□□□ -0.51
CLSTN3-216ENST00000545663 FAM90A12PA8MX19 464 aa11.89□□□□□ -0.51
CLSTN3-216ENST00000545663 FAM90A5PA8MXJ8 464 aa11.89□□□□□ -0.51
CLSTN3-216ENST00000545663 ZNF670-ZNF695F2Z2N8 137 aa11.89□□□□□ -0.51
CLSTN3-216ENST00000545663 M0R129 80 aa11.89□□□□□ -0.51
CLSTN3-216ENST00000545663 IGLV1-47P01700 117 aa11.89□□□□□ -0.51
CLSTN3-216ENST00000545663 FAM90A15PP0C7V4 464 aa11.89□□□□□ -0.51
CLSTN3-216ENST00000545663 FAM90A13PP0C7W8 464 aa11.89□□□□□ -0.51
CLSTN3-216ENST00000545663 FAM90A14PP0C7W9 464 aa11.89□□□□□ -0.51
CLSTN3-216ENST00000545663 FAM90A24PP0C7X0 464 aa11.89□□□□□ -0.51
CLSTN3-216ENST00000545663 CFL1P23528 166 aaKnown RBP11.89□□□□□ -0.51
CLSTN3-216ENST00000545663 GNB1P62873 340 aa11.89□□□□□ -0.51
CLSTN3-216ENST00000545663 PRAMEF5Q5TYX0 476 aa11.89□□□□□ -0.51
CLSTN3-216ENST00000545663 GDPD3Q7L5L3 318 aa11.89□□□□□ -0.51
CLSTN3-216ENST00000545663 CATSPERDQ86XM0 798 aa11.89□□□□□ -0.51
CLSTN3-216ENST00000545663 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.89□□□□□ -0.51
CLSTN3-216ENST00000545663 SGPP2Q8IWX5 399 aa11.89□□□□□ -0.51
CLSTN3-216ENST00000545663 HAVCR2Q8TDQ0 301 aa11.89□□□□□ -0.51
CLSTN3-216ENST00000545663 DLX4Q92988 240 aaPredicted RBP11.89□□□□□ -0.51
CLSTN3-216ENST00000545663 NRIP2Q9BQI9 281 aa11.89□□□□□ -0.51
CLSTN3-216ENST00000545663 MROQ9BYG7 248 aa11.89□□□□□ -0.51
CLSTN3-216ENST00000545663 OR10A2Q9H208 303 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms